RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 ZNF746Q6NUN9 644 aaPredicted RBP15.88■□□□□ 0.13
APOBEC3B-202ENST00000335760 SEPT1Q8WYJ6 367 aa15.88■□□□□ 0.13
APOBEC3B-202ENST00000335760 ELP1O95163 1332 aa15.88■□□□□ 0.13
APOBEC3B-202ENST00000335760 KBTBD13C9JR72 458 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 MYL3P08590 195 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 TCF7P36402 384 aaPredicted RBP15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 PRPHP41219 470 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 TECP42680 631 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 PPP2R5CQ13362 524 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 STK38Q15208 465 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 DGKDQ16760 1214 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 TMEM266Q2M3C6 531 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 NCAPH2Q6IBW4 605 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 DTHD1Q6ZMT9 781 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 PCSK9Q8NBP7 692 aaKnown RBP15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 CHAMP1Q96JM3 812 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 POLR3EQ9NVU0 708 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 SAMM50Q9Y512 469 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 CCDC85CA6NKD9 419 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 WDR64B1ANS9 1081 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 DNM1LO00429 736 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 PPFIA4O75335 1185 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 ASGR1P07306 291 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 NCLP19338 710 aaKnown RBP15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 NASPP49321 788 aaPredicted RBP15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 UTP14CQ5TAP6 766 aaKnown RBP15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 CCSAPQ6IQ19 270 aaPredicted RBP15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 MIS18BP1Q6P0N0 1132 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 B3GNT9Q6UX72 402 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 ABHD15Q6UXT9 468 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 MIER3Q7Z3K6 550 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 SMAP1Q8IYB5 467 aaPredicted RBP15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 TSEN34Q9BSV6 310 aaKnown RBP15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 DISC1Q9NRI5 854 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 CFAP45Q9UL16 551 aa15.87■□□□□ 0.13
APOBEC3B-202ENST00000335760 EML1O00423 815 aa15.86■□□□□ 0.13
APOBEC3B-202ENST00000335760 KPNA6O60684 536 aa15.86■□□□□ 0.13
APOBEC3B-202ENST00000335760 ATG7O95352 703 aa15.86■□□□□ 0.13
APOBEC3B-202ENST00000335760 SUPT20HL2P0C7V6 817 aa15.86■□□□□ 0.13
APOBEC3B-202ENST00000335760 HOXD8P13378 290 aaPredicted RBP15.86■□□□□ 0.13
APOBEC3B-202ENST00000335760 CAPN2P17655 700 aa15.86■□□□□ 0.13
APOBEC3B-202ENST00000335760 EN2P19622 333 aaPredicted RBP15.86■□□□□ 0.13
APOBEC3B-202ENST00000335760 SFNP31947 248 aa15.86■□□□□ 0.13
APOBEC3B-202ENST00000335760 FXR2P51116 673 aaKnown RBP eCLIP15.86■□□□□ 0.13
APOBEC3B-202ENST00000335760 JAK3P52333 1124 aa15.86■□□□□ 0.13
APOBEC3B-202ENST00000335760 ACLYP53396 1101 aa15.86■□□□□ 0.13
APOBEC3B-202ENST00000335760 KRT85P78386 507 aa15.86■□□□□ 0.13
APOBEC3B-202ENST00000335760 SPIRE1Q08AE8 756 aa15.86■□□□□ 0.13
APOBEC3B-202ENST00000335760 SLC39A14Q15043 492 aa15.86■□□□□ 0.13
APOBEC3B-202ENST00000335760 IL17AQ16552 155 aa15.86■□□□□ 0.13
APOBEC3B-202ENST00000335760 ARL6IP4Q66PJ3 421 aaKnown RBP15.86■□□□□ 0.13
APOBEC3B-202ENST00000335760 LINC00301Q8NCQ3 95 aa15.86■□□□□ 0.13
APOBEC3B-202ENST00000335760 PCDHA10Q9Y5I2 948 aa15.86■□□□□ 0.13
APOBEC3B-202ENST00000335760 BRCA2P51587 3418 aa15.85■□□□□ 0.13
APOBEC3B-202ENST00000335760 VWA3AA6NCI4 1184 aa15.85■□□□□ 0.13
APOBEC3B-202ENST00000335760 MOXD2PA6NHM9 499 aa15.85■□□□□ 0.13
APOBEC3B-202ENST00000335760 POTEMA6NI47 508 aa15.85■□□□□ 0.13
APOBEC3B-202ENST00000335760 BACH1O14867 736 aa15.85■□□□□ 0.13
APOBEC3B-202ENST00000335760 YEATS4O95619 227 aa15.85■□□□□ 0.13
APOBEC3B-202ENST00000335760 LGALS2P05162 132 aa15.85■□□□□ 0.13
APOBEC3B-202ENST00000335760 PSAPP07602 524 aa15.85■□□□□ 0.13
APOBEC3B-202ENST00000335760 ZNF286BP0CG31 522 aa15.85■□□□□ 0.13
APOBEC3B-202ENST00000335760 MARCKSP29966 332 aaPredicted RBP15.85■□□□□ 0.13
APOBEC3B-202ENST00000335760 PURAQ00577 322 aaKnown RBP15.85■□□□□ 0.13
APOBEC3B-202ENST00000335760 CXCL17Q6UXB2 119 aa15.85■□□□□ 0.13
APOBEC3B-202ENST00000335760 ANKLE1Q8NAG6 615 aa15.85■□□□□ 0.13
APOBEC3B-202ENST00000335760 RDM1Q8NG50 284 aa15.85■□□□□ 0.13
APOBEC3B-202ENST00000335760 PHF24Q9UPV7 400 aa15.85■□□□□ 0.13
APOBEC3B-202ENST00000335760 IGKV6D-21A0A0A0MT36 114 aa15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 SPTLC2O15270 562 aa15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 MNX1P50219 401 aaPredicted RBP15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 MAPK8IP2Q13387 824 aaPredicted RBP15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 PDIA5Q14554 519 aa15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 EPHA7Q15375 998 aa15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 FAM160B1Q5W0V3 765 aa15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 SWSAP1Q6NVH7 229 aa15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 TRIM50Q86XT4 487 aa15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 GLG1Q92896 1179 aa15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 FERMT2Q96AC1 680 aa15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 PCYT2Q99447 389 aa15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 C16orf70Q9BSU1 422 aa15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 MTG1Q9BT17 334 aaPredicted RBP15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 RAB34Q9BZG1 259 aa15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 AZI2Q9H6S1 392 aa15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 ZNF302Q9NR11 478 aa15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 GABBR1Q9UBS5 961 aa15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 LRWD1Q9UFC0 647 aa15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 FBXO2Q9UK22 296 aaPredicted RBP15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 MORC2Q9Y6X9 1032 aaPredicted RBP15.84■□□□□ 0.13
APOBEC3B-202ENST00000335760 EMSYQ7Z589 1322 aa15.83■□□□□ 0.12
APOBEC3B-202ENST00000335760 LGR5O75473 907 aa15.83■□□□□ 0.12
APOBEC3B-202ENST00000335760 STAT5BP51692 787 aa15.83■□□□□ 0.12
APOBEC3B-202ENST00000335760 SOX10P56693 466 aa15.83■□□□□ 0.12
APOBEC3B-202ENST00000335760 CHMP4BP1P59074 171 aa15.83■□□□□ 0.12
APOBEC3B-202ENST00000335760 GRIN1Q05586 938 aa15.83■□□□□ 0.12
APOBEC3B-202ENST00000335760 CCDC60Q8IWA6 550 aaPredicted RBP15.83■□□□□ 0.12
APOBEC3B-202ENST00000335760 IGSF22Q8N9C0 903 aa15.83■□□□□ 0.12
APOBEC3B-202ENST00000335760 KCNG4Q8TDN1 519 aa15.83■□□□□ 0.12
APOBEC3B-202ENST00000335760 DIS3LQ8TF46 1054 aaKnown RBP15.83■□□□□ 0.12
APOBEC3B-202ENST00000335760 TNPO1Q92973 898 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms