RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 BRWD3Q6RI45 1802 aa19.88■□□□□ 0.77
PKP3-201ENST00000331563 HSPA9P38646 679 aaKnown RBP19.88■□□□□ 0.77
PKP3-201ENST00000331563 NLRP5P59047 1200 aa19.88■□□□□ 0.77
PKP3-201ENST00000331563 CCDC63Q8NA47 563 aa19.88■□□□□ 0.77
PKP3-201ENST00000331563 RIOK1Q9BRS2 568 aaKnown RBP19.88■□□□□ 0.77
PKP3-201ENST00000331563 TAF1DQ9H5J8 278 aaPredicted RBP19.88■□□□□ 0.77
PKP3-201ENST00000331563 SMNDC1O75940 238 aaKnown RBP eCLIP19.87■□□□□ 0.779e-6■■■■□ 21.6
PKP3-201ENST00000331563 PLEKHA8P1O95397 391 aa19.87■□□□□ 0.77
PKP3-201ENST00000331563 SERPINB2P05120 415 aa19.87■□□□□ 0.77
PKP3-201ENST00000331563 TNNC1P63316 161 aa19.87■□□□□ 0.77
PKP3-201ENST00000331563 ALX1Q15699 326 aa19.87■□□□□ 0.77
PKP3-201ENST00000331563 LACTB2Q53H82 288 aaPredicted RBP19.87■□□□□ 0.77
PKP3-201ENST00000331563 CCDC178Q5BJE1 867 aa19.87■□□□□ 0.77
PKP3-201ENST00000331563 ARMC9Q7Z3E5 817 aa19.87■□□□□ 0.77
PKP3-201ENST00000331563 DUSP9Q99956 384 aaKnown RBP19.87■□□□□ 0.77
PKP3-201ENST00000331563 TMX4Q9H1E5 349 aaPredicted RBP19.87■□□□□ 0.77
PKP3-201ENST00000331563 L3MBTL1Q9Y468 752 aa19.87■□□□□ 0.77
PKP3-201ENST00000331563 A0A1W2PQJ5 194 aa19.87■□□□□ 0.77
PKP3-201ENST00000331563 PALMO75781 387 aa19.87■□□□□ 0.77
PKP3-201ENST00000331563 RTN3O95197 1032 aaPredicted RBP19.87■□□□□ 0.77
PKP3-201ENST00000331563 CDC25CP30307 473 aa19.87■□□□□ 0.77
PKP3-201ENST00000331563 SLC1A4P43007 532 aa19.87■□□□□ 0.77
PKP3-201ENST00000331563 MAGOHP61326 146 aaKnown RBP19.87■□□□□ 0.77
PKP3-201ENST00000331563 EHHADHQ08426 723 aa19.87■□□□□ 0.77
PKP3-201ENST00000331563 ANKRD40Q6AI12 368 aa19.87■□□□□ 0.77
PKP3-201ENST00000331563 CCT6BQ92526 530 aa19.87■□□□□ 0.77
PKP3-201ENST00000331563 MAGOHBQ96A72 148 aaKnown RBP19.87■□□□□ 0.77
PKP3-201ENST00000331563 LRRC45Q96CN5 670 aa19.87■□□□□ 0.77
PKP3-201ENST00000331563 BAZ2AQ9UIF9 1905 aaKnown RBP19.86■□□□□ 0.77
PKP3-201ENST00000331563 DNAJC8O75937 253 aaPredicted RBP19.86■□□□□ 0.77
PKP3-201ENST00000331563 ANP32DO95626 131 aa19.86■□□□□ 0.77
PKP3-201ENST00000331563 BIRC3Q13489 604 aa19.86■□□□□ 0.77
PKP3-201ENST00000331563 LRIG3Q6UXM1 1119 aa19.86■□□□□ 0.77
PKP3-201ENST00000331563 CACNA2D4Q7Z3S7 1137 aa19.86■□□□□ 0.77
PKP3-201ENST00000331563 TBC1D1Q86TI0 1168 aaPredicted RBP19.86■□□□□ 0.77
PKP3-201ENST00000331563 P3H4Q92791 437 aa19.86■□□□□ 0.77
PKP3-201ENST00000331563 P2RX5Q93086 422 aa19.86■□□□□ 0.77
PKP3-201ENST00000331563 NSUN4Q96CB9 384 aaKnown RBP19.86■□□□□ 0.77
PKP3-201ENST00000331563 KDM4CQ9H3R0 1056 aa19.86■□□□□ 0.77
PKP3-201ENST00000331563 DISC1Q9NRI5 854 aa19.86■□□□□ 0.77
PKP3-201ENST00000331563 BAZ2BQ9UIF8 2168 aaKnown RBP19.86■□□□□ 0.77
PKP3-201ENST00000331563 TNRC6CQ9HCJ0 1690 aaKnown RBP19.86■□□□□ 0.77
PKP3-201ENST00000331563 TNKSO95271 1327 aa19.86■□□□□ 0.77
PKP3-201ENST00000331563 BICDL2A1A5D9 508 aa19.86■□□□□ 0.77
PKP3-201ENST00000331563 LRRC53A6NM62 1247 aa19.86■□□□□ 0.77
PKP3-201ENST00000331563 EPHB6O15197 1021 aa19.86■□□□□ 0.77
PKP3-201ENST00000331563 ZNF844Q08AG5 666 aa19.86■□□□□ 0.77
PKP3-201ENST00000331563 TRIM74Q86UV6 250 aa19.86■□□□□ 0.77
PKP3-201ENST00000331563 TRIM73Q86UV7 250 aa19.86■□□□□ 0.77
PKP3-201ENST00000331563 DDX42Q86XP3 938 aaKnown RBP eCLIP19.86■□□□□ 0.77
PKP3-201ENST00000331563 ANKS4BQ8N8V4 417 aa19.86■□□□□ 0.77
PKP3-201ENST00000331563 CNOT8Q9UFF9 292 aaKnown RBP19.86■□□□□ 0.77
PKP3-201ENST00000331563 LY75O60449 1722 aa19.86■□□□□ 0.77
PKP3-201ENST00000331563 PP2D1A8MPX8 630 aa19.85■□□□□ 0.77
PKP3-201ENST00000331563 FESP07332 822 aa19.85■□□□□ 0.77
PKP3-201ENST00000331563 UBA7P41226 1012 aa19.85■□□□□ 0.77
PKP3-201ENST00000331563 BYSLQ13895 437 aaKnown RBP19.85■□□□□ 0.77
PKP3-201ENST00000331563 KCTD19Q17RG1 926 aaPredicted RBP19.85■□□□□ 0.77
PKP3-201ENST00000331563 PROCA1Q8NCQ7 364 aaPredicted RBP19.85■□□□□ 0.77
PKP3-201ENST00000331563 DHTKD1Q96HY7 919 aaPredicted RBP19.85■□□□□ 0.77
PKP3-201ENST00000331563 YIPF3Q9GZM5 350 aa19.85■□□□□ 0.77
PKP3-201ENST00000331563 CORO1CQ9ULV4 474 aaPredicted RBP19.85■□□□□ 0.77
PKP3-201ENST00000331563 TXNRD1Q16881 649 aa19.85■□□□□ 0.77
PKP3-201ENST00000331563 KRT71Q3SY84 523 aa19.85■□□□□ 0.77
PKP3-201ENST00000331563 MIIPQ5JXC2 388 aa19.85■□□□□ 0.77
PKP3-201ENST00000331563 CCDC197Q8NCU1 140 aa19.85■□□□□ 0.77
PKP3-201ENST00000331563 GIMAP8Q8ND71 665 aaPredicted RBP19.85■□□□□ 0.77
PKP3-201ENST00000331563 RPGRQ92834 1020 aaKnown RBP19.85■□□□□ 0.77
PKP3-201ENST00000331563 ERGIC2Q96RQ1 377 aa19.85■□□□□ 0.77
PKP3-201ENST00000331563 PNPLA7Q6ZV29 1317 aa19.85■□□□□ 0.77
PKP3-201ENST00000331563 NID2Q14112 1375 aa19.85■□□□□ 0.77
PKP3-201ENST00000331563 USP17L12C9JPN9 530 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 USP17L21D6R901 530 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 NKRFO15226 690 aaKnown RBP eCLIP19.84■□□□□ 0.77
PKP3-201ENST00000331563 AHCYL1O43865 530 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 CYP2D6P10635 497 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 PDE4DQ08499 809 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 DIXDC1Q155Q3 683 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 FIGNQ5HY92 759 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 CATIPQ7Z7H3 387 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 SWAP70Q9UH65 585 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 C15orf41Q9Y2V0 281 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 ZNF831Q5JPB2 1677 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 DOCK2Q92608 1830 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 LONP1P36776 959 aaKnown RBP19.84■□□□□ 0.77
PKP3-201ENST00000331563 GRAPQ13588 217 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 SLC30A9Q6PML9 568 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 TAX1BP1Q86VP1 789 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 MDM1Q8TC05 714 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 GRAPLQ8TC17 118 aaPredicted RBP19.84■□□□□ 0.77
PKP3-201ENST00000331563 TAF4BQ92750 862 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 ANKRD2Q9GZV1 360 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 RNF41Q9H4P4 317 aaPredicted RBP19.84■□□□□ 0.77
PKP3-201ENST00000331563 CCT8L1PA6NM43 557 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 DCDC2CA8MYV0 355 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 PRPF3O43395 683 aaKnown RBP19.84■□□□□ 0.77
PKP3-201ENST00000331563 CCNE1P24864 410 aa19.84■□□□□ 0.77
PKP3-201ENST00000331563 CTNND1O60716 968 aaKnown RBP19.83■□□□□ 0.77
PKP3-201ENST00000331563 ERVK-9P63128 1117 aa19.83■□□□□ 0.77
PKP3-201ENST00000331563 GPSM2P81274 684 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms