RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 HGSNATQ68CP4 663 aa19.88■□□□□ 0.77
CLSTN3-202ENST00000331148 ZNF804AQ7Z570 1209 aa19.88■□□□□ 0.77
CLSTN3-202ENST00000331148 KLHL7Q8IXQ5 586 aa19.88■□□□□ 0.77
CLSTN3-202ENST00000331148 SP8Q8IXZ3 490 aa19.88■□□□□ 0.77
CLSTN3-202ENST00000331148 RASGRP4Q8TDF6 673 aa19.88■□□□□ 0.77
CLSTN3-202ENST00000331148 TBC1D22AQ8WUA7 517 aa19.88■□□□□ 0.77
CLSTN3-202ENST00000331148 P3H4Q92791 437 aa19.88■□□□□ 0.77
CLSTN3-202ENST00000331148 TATDN2Q93075 761 aa19.88■□□□□ 0.77
CLSTN3-202ENST00000331148 BACH1O14867 736 aa19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 MGRN1O60291 552 aa19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 DNAJC8O75937 253 aaPredicted RBP19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 ERCC3P19447 782 aa19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 PPP2R2AP63151 447 aa19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 MAN2A1Q16706 1144 aa19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 TDRD12Q587J7 1177 aaKnown RBP19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 MEI1Q5TIA1 1274 aa19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 ARMC9Q7Z3E5 817 aa19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 USP38Q8NB14 1042 aa19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 RAPGEF5Q92565 580 aa19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 FLT1P17948 1338 aa19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 PPEF1O14829 653 aaPredicted RBP19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 NEBLO76041 1014 aa19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 ECM2O94769 699 aaPredicted RBP19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 CTNNA1P35221 906 aaKnown RBP19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 RNASE9P60153 205 aaKnown RBP19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 RUFY4Q6ZNE9 571 aa19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 KIAA0895Q8NCT3 520 aa19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 LRRC45Q96CN5 670 aa19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 HVCN1Q96D96 273 aa19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 C7orf25Q9BPX7 421 aa19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 CNOT8Q9UFF9 292 aaKnown RBP19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 PACSIN2Q9UNF0 486 aaPredicted RBP19.87■□□□□ 0.77
CLSTN3-202ENST00000331148 MAGEB6P1A0A0J9YX57 407 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 PPP1R12AO14974 1030 aaPredicted RBP19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 ATP2C2O75185 946 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 ALDH1B1P30837 517 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 NAB2Q15742 525 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 COBLL1Q53SF7 1204 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 LRCH2Q5VUJ6 765 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 CCT6BQ92526 530 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 HPS3Q969F9 1004 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 TMEM59LQ9UK28 342 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 DLEC1Q9Y238 1755 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 RTN2O75298 545 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 GHRP10912 638 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 BAG6P46379 1132 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 CUL1Q13616 776 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 AGBL2Q5U5Z8 902 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 GKAP1Q5VSY0 366 aaPredicted RBP19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 CENPPQ6IPU0 288 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 FMNL3Q8IVF7 1028 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 NSUN4Q96CB9 384 aaKnown RBP19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 GPR101Q96P66 508 aaPredicted RBP19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 BCCIPQ9P287 314 aaKnown RBP eCLIP19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 PCDHA4Q9UN74 947 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 PCDHGC5Q9Y5F6 944 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 CACNA1SQ13698 1873 aa19.86■□□□□ 0.77
CLSTN3-202ENST00000331148 FRMD3A2A2Y4 597 aa19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 EHHADHQ08426 723 aa19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 ODF2Q5BJF6 829 aa19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 CNNM4Q6P4Q7 775 aa19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 CACNA2D4Q7Z3S7 1137 aa19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 CABP7Q86V35 215 aa19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 TBC1D16Q8TBP0 767 aa19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 KDM4CQ9H3R0 1056 aa19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 ATP6V0A2Q9Y487 856 aa19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 ABCB11O95342 1321 aa19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 CCDC194A0A1B0GVG4 234 aa19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 MECOMQ03112 1051 aa19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 NBPF9Q3BBW0 867 aa19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 SPTY2D1Q68D10 685 aaPredicted RBP19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 WDR66Q8TBY9 1149 aa19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 ZNF384Q8TF68 577 aa19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 GPKOWQ92917 476 aaPredicted RBP eCLIP19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 MASTLQ96GX5 879 aa19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 TRIM6Q9C030 488 aaPredicted RBP19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 POLLQ9UGP5 575 aa19.85■□□□□ 0.77
CLSTN3-202ENST00000331148 QSER1Q2KHR3 1735 aa19.84■□□□□ 0.77
CLSTN3-202ENST00000331148 ATP6V1G2O95670 118 aa19.84■□□□□ 0.77
CLSTN3-202ENST00000331148 DRD4P21917 467 aa19.84■□□□□ 0.77
CLSTN3-202ENST00000331148 KLRC1P26715 233 aa19.84■□□□□ 0.77
CLSTN3-202ENST00000331148 ELF3P78545 371 aaPredicted RBP19.84■□□□□ 0.77
CLSTN3-202ENST00000331148 TMED8Q6PL24 325 aaPredicted RBP19.84■□□□□ 0.77
CLSTN3-202ENST00000331148 EDEM3Q9BZQ6 932 aa19.84■□□□□ 0.77
CLSTN3-202ENST00000331148 PHF20L1A8MW92 1017 aa19.83■□□□□ 0.77
CLSTN3-202ENST00000331148 ORC4O43929 436 aa19.83■□□□□ 0.77
CLSTN3-202ENST00000331148 NMT2O60551 498 aa19.83■□□□□ 0.77
CLSTN3-202ENST00000331148 FGRP09769 529 aa19.83■□□□□ 0.77
CLSTN3-202ENST00000331148 PRDX5P30044 214 aa19.83■□□□□ 0.77
CLSTN3-202ENST00000331148 GBP2P32456 591 aaPredicted RBP19.83■□□□□ 0.77
CLSTN3-202ENST00000331148 RIOK1Q9BRS2 568 aaKnown RBP19.83■□□□□ 0.77
CLSTN3-202ENST00000331148 SLC39A2Q9NP94 309 aa19.83■□□□□ 0.77
CLSTN3-202ENST00000331148 LUC7LQ9NQ29 371 aaKnown RBP19.83■□□□□ 0.77
CLSTN3-202ENST00000331148 NOVA2Q9UNW9 492 aaKnown RBP19.83■□□□□ 0.77
CLSTN3-202ENST00000331148 JAG2Q9Y219 1238 aa19.83■□□□□ 0.77
CLSTN3-202ENST00000331148 C6orf229H3BNL8 230 aa19.83■□□□□ 0.76
CLSTN3-202ENST00000331148 M0R2N6 131 aa19.83■□□□□ 0.76
CLSTN3-202ENST00000331148 PPP1R12BO60237 982 aaPredicted RBP19.83■□□□□ 0.76
CLSTN3-202ENST00000331148 PRPHP41219 470 aa19.83■□□□□ 0.76
CLSTN3-202ENST00000331148 INF2Q27J81 1249 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms