RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 TXKP42681 527 aa22.46■■□□□ 1.19
CMTM4-201ENST00000330687 ERMARDQ5T6L9 678 aa22.46■■□□□ 1.19
CMTM4-201ENST00000330687 GLG1Q92896 1179 aa22.46■■□□□ 1.19
CMTM4-201ENST00000330687 PIDD1Q9HB75 910 aa22.46■■□□□ 1.19
CMTM4-201ENST00000330687 SIK3Q9Y2K2 1263 aa22.46■■□□□ 1.19
CMTM4-201ENST00000330687 CCNT1O60563 726 aaKnown RBP22.46■■□□□ 1.19
CMTM4-201ENST00000330687 IGHMBP2P38935 993 aaKnown RBP22.46■■□□□ 1.19
CMTM4-201ENST00000330687 SPTY2D1Q68D10 685 aaPredicted RBP22.46■■□□□ 1.19
CMTM4-201ENST00000330687 TMC3Q7Z5M5 1100 aa22.46■■□□□ 1.19
CMTM4-201ENST00000330687 RNF10Q8N5U6 811 aaKnown RBP22.46■■□□□ 1.19
CMTM4-201ENST00000330687 VAT1LQ9HCJ6 419 aa22.46■■□□□ 1.19
CMTM4-201ENST00000330687 TRMT112Q9UI30 125 aaKnown RBP22.46■■□□□ 1.19
CMTM4-201ENST00000330687 F8VZ95 297 aa22.45■■□□□ 1.19
CMTM4-201ENST00000330687 ZNF211Q13398 564 aaPredicted RBP22.45■■□□□ 1.19
CMTM4-201ENST00000330687 NPY5RQ15761 445 aa22.45■■□□□ 1.19
CMTM4-201ENST00000330687 MEI1Q5TIA1 1274 aa22.45■■□□□ 1.19
CMTM4-201ENST00000330687 DDX23Q9BUQ8 820 aaKnown RBP22.45■■□□□ 1.19
CMTM4-201ENST00000330687 NSRP1Q9H0G5 558 aaKnown RBP22.45■■□□□ 1.19
CMTM4-201ENST00000330687 ZFATQ9P243 1243 aa22.45■■□□□ 1.19
CMTM4-201ENST00000330687 LRRD1A4D1F6 860 aa22.45■■□□□ 1.18
CMTM4-201ENST00000330687 TCP11X1B4DZS4 312 aa22.45■■□□□ 1.18
CMTM4-201ENST00000330687 PDE8BO95263 885 aa22.45■■□□□ 1.18
CMTM4-201ENST00000330687 CDCA2Q69YH5 1023 aaPredicted RBP22.45■■□□□ 1.18
CMTM4-201ENST00000330687 GIGYF2Q6Y7W6 1299 aaKnown RBP22.45■■□□□ 1.18
CMTM4-201ENST00000330687 HOOK3Q86VS8 718 aa22.45■■□□□ 1.18
CMTM4-201ENST00000330687 METTL13Q8N6R0 699 aa22.45■■□□□ 1.18
CMTM4-201ENST00000330687 NALCNQ8IZF0 1738 aa22.45■■□□□ 1.18
CMTM4-201ENST00000330687 NEO1Q92859 1461 aa22.45■■□□□ 1.18
CMTM4-201ENST00000330687 GOLGA6L10A0A0M3HER8 536 aa22.45■■□□□ 1.18
CMTM4-201ENST00000330687 TCRBV5S4A2TA0A5A2 114 aa22.45■■□□□ 1.18
CMTM4-201ENST00000330687 DPPA5A6NC42 116 aa22.45■■□□□ 1.18
CMTM4-201ENST00000330687 FGGP02679 453 aa22.45■■□□□ 1.18
CMTM4-201ENST00000330687 PECAM1P16284 738 aaPredicted RBP22.45■■□□□ 1.18
CMTM4-201ENST00000330687 KIAA0895Q8NCT3 520 aa22.45■■□□□ 1.18
CMTM4-201ENST00000330687 ANKS1AQ92625 1134 aa22.45■■□□□ 1.18
CMTM4-201ENST00000330687 ARID4AP29374 1257 aaPredicted RBP22.44■■□□□ 1.18
CMTM4-201ENST00000330687 ECHS1P30084 290 aa22.44■■□□□ 1.18
CMTM4-201ENST00000330687 DYNLL1P63167 89 aaKnown RBP22.44■■□□□ 1.18
CMTM4-201ENST00000330687 CACNB1Q02641 598 aaPredicted RBP22.44■■□□□ 1.18
CMTM4-201ENST00000330687 NAB2Q15742 525 aa22.44■■□□□ 1.18
CMTM4-201ENST00000330687 DNAJC17Q9NVM6 304 aaKnown RBP22.44■■□□□ 1.18
CMTM4-201ENST00000330687 GHRP10912 638 aa22.44■■□□□ 1.18
CMTM4-201ENST00000330687 FGFR4P22455 802 aa22.44■■□□□ 1.18
CMTM4-201ENST00000330687 ACSBG1Q96GR2 724 aa22.44■■□□□ 1.18
CMTM4-201ENST00000330687 ARPP21Q9UBL0 812 aaPredicted RBP22.44■■□□□ 1.18
CMTM4-201ENST00000330687 A0A1W2PQJ5 194 aa22.44■■□□□ 1.18
CMTM4-201ENST00000330687 SPDYE5A6NIY4 337 aa22.44■■□□□ 1.18
CMTM4-201ENST00000330687 ATP4AP20648 1035 aa22.44■■□□□ 1.18
CMTM4-201ENST00000330687 ABCB4P21439 1286 aa22.44■■□□□ 1.18
CMTM4-201ENST00000330687 AGBL2Q5U5Z8 902 aa22.44■■□□□ 1.18
CMTM4-201ENST00000330687 CNNM4Q6P4Q7 775 aa22.44■■□□□ 1.18
CMTM4-201ENST00000330687 TMTC3Q6ZXV5 915 aa22.44■■□□□ 1.18
CMTM4-201ENST00000330687 EPS8L3Q8TE67 593 aaKnown RBP22.44■■□□□ 1.18
CMTM4-201ENST00000330687 BAP1Q92560 729 aa22.44■■□□□ 1.18
CMTM4-201ENST00000330687 ETNK1Q9HBU6 452 aa22.44■■□□□ 1.18
CMTM4-201ENST00000330687 LINGO3P0C6S8 592 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 ABL2P42684 1182 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 PAPOLAP51003 745 aaKnown RBP22.43■■□□□ 1.18
CMTM4-201ENST00000330687 NCALDP61601 193 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 CDK17Q00537 523 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 SLC29A2Q14542 456 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 ASIC2Q16515 512 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 CNOT10Q9H9A5 744 aaKnown RBP22.43■■□□□ 1.18
CMTM4-201ENST00000330687 C4AP0C0L4 1744 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 C4BP0C0L5 1744 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 MSH2P43246 934 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 RAD23BP54727 409 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 NBPF20Q3BBV1 942 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 TCERG1LQ5VWI1 586 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 CCHCR1Q8TD31 782 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 P3H4Q92791 437 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 NAF1Q96HR8 494 aaKnown RBP22.43■■□□□ 1.18
CMTM4-201ENST00000330687 ZMYND12Q9H0C1 365 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 C5orf60A6NFR6 353 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 TSPY2A6NKD2 308 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 TLR2O60603 784 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 UQCRFS1P1P0C7P4 283 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 ACTN1P12814 892 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 ERFP50548 548 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 UBAP2Q5T6F2 1119 aaKnown RBP22.43■■□□□ 1.18
CMTM4-201ENST00000330687 SAMD1Q6SPF0 538 aaPredicted RBP22.43■■□□□ 1.18
CMTM4-201ENST00000330687 DCAF5Q96JK2 942 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 SLC5A4Q9NY91 659 aa22.43■■□□□ 1.18
CMTM4-201ENST00000330687 ABCC12Q96J65 1359 aa22.42■■□□□ 1.18
CMTM4-201ENST00000330687 PYGLP06737 847 aa22.42■■□□□ 1.18
CMTM4-201ENST00000330687 TEKT4Q8WW24 435 aa22.42■■□□□ 1.18
CMTM4-201ENST00000330687 NR2E1Q9Y466 385 aa22.42■■□□□ 1.18
CMTM4-201ENST00000330687 MARCH6O60337 910 aa22.42■■□□□ 1.18
CMTM4-201ENST00000330687 CCND1P24385 295 aa22.42■■□□□ 1.18
CMTM4-201ENST00000330687 KIF6Q6ZMV9 814 aa22.42■■□□□ 1.18
CMTM4-201ENST00000330687 FBF1Q8TES7 1133 aa22.42■■□□□ 1.18
CMTM4-201ENST00000330687 L3MBTL3Q96JM7 780 aaPredicted RBP22.42■■□□□ 1.18
CMTM4-201ENST00000330687 RGPD8O14715 1765 aaPredicted RBP22.42■■□□□ 1.18
CMTM4-201ENST00000330687 CFAP73A6NFT4 308 aa22.41■■□□□ 1.18
CMTM4-201ENST00000330687 SERPING1P05155 500 aa22.41■■□□□ 1.18
CMTM4-201ENST00000330687 ZMYND8Q9ULU4 1186 aaPredicted RBP22.41■■□□□ 1.18
CMTM4-201ENST00000330687 JAG2Q9Y219 1238 aa22.41■■□□□ 1.18
CMTM4-201ENST00000330687 USP17L12C9JPN9 530 aa22.41■■□□□ 1.18
CMTM4-201ENST00000330687 USP17L21D6R901 530 aa22.41■■□□□ 1.18
CMTM4-201ENST00000330687 TROAPQ12815 778 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms