RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 ENPP3O14638 875 aa17.38■□□□□ 0.37
CTHRC1-201ENST00000330295 KCNC3Q14003 757 aa17.38■□□□□ 0.37
CTHRC1-201ENST00000330295 PPP4R3BQ5MIZ7 849 aa17.38■□□□□ 0.37
CTHRC1-201ENST00000330295 SYDE2Q5VT97 1194 aa17.38■□□□□ 0.37
CTHRC1-201ENST00000330295 TTBK2Q6IQ55 1244 aa17.38■□□□□ 0.37
CTHRC1-201ENST00000330295 BTNL9Q6UXG8 535 aa17.38■□□□□ 0.37
CTHRC1-201ENST00000330295 CHAMP1Q96JM3 812 aa17.38■□□□□ 0.37
CTHRC1-201ENST00000330295 BOLA2Q9H3K6 86 aa17.38■□□□□ 0.37
CTHRC1-201ENST00000330295 MTMR7Q9Y216 660 aa17.38■□□□□ 0.37
CTHRC1-201ENST00000330295 GPR179Q6PRD1 2367 aa17.38■□□□□ 0.37
CTHRC1-201ENST00000330295 ANKRD11Q6UB99 2663 aaPredicted RBP17.37■□□□□ 0.37
CTHRC1-201ENST00000330295 PPFIA3O75145 1194 aa17.37■□□□□ 0.37
CTHRC1-201ENST00000330295 STXBP2Q15833 593 aa17.37■□□□□ 0.37
CTHRC1-201ENST00000330295 FAM26DQ5JW98 314 aa17.37■□□□□ 0.37
CTHRC1-201ENST00000330295 ZSCAN25Q6NSZ9 544 aa17.37■□□□□ 0.37
CTHRC1-201ENST00000330295 TMEM57Q8N5G2 664 aa17.37■□□□□ 0.37
CTHRC1-201ENST00000330295 RHPN1Q8TCX5 695 aa17.37■□□□□ 0.37
CTHRC1-201ENST00000330295 POMKQ9H5K3 350 aa17.37■□□□□ 0.37
CTHRC1-201ENST00000330295 EPB41L4AQ9HCS5 686 aaPredicted RBP17.37■□□□□ 0.37
CTHRC1-201ENST00000330295 CDH22Q9UJ99 828 aa17.37■□□□□ 0.37
CTHRC1-201ENST00000330295 RCAN3Q9UKA8 241 aa17.37■□□□□ 0.37
CTHRC1-201ENST00000330295 PNMA2Q9UL42 364 aa17.37■□□□□ 0.37
CTHRC1-201ENST00000330295 FANCMQ8IYD8 2048 aa17.37■□□□□ 0.37
CTHRC1-201ENST00000330295 ADRB1P08588 477 aa17.36■□□□□ 0.37
CTHRC1-201ENST00000330295 SMIM10L2AP0DMW4 78 aa17.36■□□□□ 0.37
CTHRC1-201ENST00000330295 SMIM10L2BP0DMW5 78 aa17.36■□□□□ 0.37
CTHRC1-201ENST00000330295 HOXB8P17481 243 aaPredicted RBP17.36■□□□□ 0.37
CTHRC1-201ENST00000330295 TDO2P48775 406 aa17.36■□□□□ 0.37
CTHRC1-201ENST00000330295 UBE3AQ05086 875 aa17.36■□□□□ 0.37
CTHRC1-201ENST00000330295 ZC3H14Q6PJT7 736 aaKnown RBP17.36■□□□□ 0.37
CTHRC1-201ENST00000330295 ITPRIPQ8IWB1 547 aa17.36■□□□□ 0.37
CTHRC1-201ENST00000330295 DCAF4Q8WV16 495 aa17.36■□□□□ 0.37
CTHRC1-201ENST00000330295 C16orf70Q9BSU1 422 aa17.36■□□□□ 0.37
CTHRC1-201ENST00000330295 RNPEPQ9H4A4 650 aa17.36■□□□□ 0.37
CTHRC1-201ENST00000330295 MRVI1Q9Y6F6 885 aa17.36■□□□□ 0.37
CTHRC1-201ENST00000330295 IFIT2P09913 472 aaKnown RBP17.35■□□□□ 0.37
CTHRC1-201ENST00000330295 GHRP10912 638 aa17.35■□□□□ 0.37
CTHRC1-201ENST00000330295 HSDL1Q3SXM5 330 aa17.35■□□□□ 0.37
CTHRC1-201ENST00000330295 PAN2Q504Q3 1202 aaKnown RBP17.35■□□□□ 0.37
CTHRC1-201ENST00000330295 CLASRPQ8N2M8 674 aaKnown RBP17.35■□□□□ 0.37
CTHRC1-201ENST00000330295 NECTIN4Q96NY8 510 aa17.35■□□□□ 0.37
CTHRC1-201ENST00000330295 MYSM1Q5VVJ2 828 aa17.34■□□□□ 0.37
CTHRC1-201ENST00000330295 ZDHHC14Q8IZN3 488 aa17.34■□□□□ 0.37
CTHRC1-201ENST00000330295 RGS22Q8NE09 1264 aa17.34■□□□□ 0.37
CTHRC1-201ENST00000330295 WDR19Q8NEZ3 1342 aa17.34■□□□□ 0.37
CTHRC1-201ENST00000330295 RASGRP4Q8TDF6 673 aa17.34■□□□□ 0.37
CTHRC1-201ENST00000330295 NSUN6Q8TEA1 469 aaKnown RBP17.34■□□□□ 0.37
CTHRC1-201ENST00000330295 TAAR1Q96RJ0 339 aa17.34■□□□□ 0.37
CTHRC1-201ENST00000330295 IWS1Q96ST2 819 aa17.34■□□□□ 0.37
CTHRC1-201ENST00000330295 CHMP4BQ9H444 224 aaKnown RBP17.34■□□□□ 0.37
CTHRC1-201ENST00000330295 LIMD1Q9UGP4 676 aa17.34■□□□□ 0.37
CTHRC1-201ENST00000330295 H3BRB1 525 aa17.33■□□□□ 0.36
CTHRC1-201ENST00000330295 CHRNA1P02708 482 aa17.33■□□□□ 0.36
CTHRC1-201ENST00000330295 ERVFC1P60507 584 aa17.33■□□□□ 0.36
CTHRC1-201ENST00000330295 PDE12Q6L8Q7 609 aaKnown RBP17.33■□□□□ 0.36
CTHRC1-201ENST00000330295 LLGL2Q6P1M3 1020 aa17.33■□□□□ 0.36
CTHRC1-201ENST00000330295 CRIPAKQ8N1N5 446 aa17.33■□□□□ 0.36
CTHRC1-201ENST00000330295 TDRD5Q8NAT2 981 aaKnown RBP17.33■□□□□ 0.36
CTHRC1-201ENST00000330295 RIN2Q8WYP3 895 aaPredicted RBP17.33■□□□□ 0.36
CTHRC1-201ENST00000330295 SPATA33Q96N06 139 aa17.33■□□□□ 0.36
CTHRC1-201ENST00000330295 TUT1Q9H6E5 874 aaKnown RBP17.33■□□□□ 0.36
CTHRC1-201ENST00000330295 EHMT1Q9H9B1 1298 aa17.33■□□□□ 0.36
CTHRC1-201ENST00000330295 ERVK-5Q9HDB9 667 aa17.33■□□□□ 0.36
CTHRC1-201ENST00000330295 IL17RBQ9NRM6 502 aa17.33■□□□□ 0.36
CTHRC1-201ENST00000330295 NMT2O60551 498 aa17.32■□□□□ 0.36
CTHRC1-201ENST00000330295 GNAT1P11488 350 aa17.32■□□□□ 0.36
CTHRC1-201ENST00000330295 HOXB3P14651 431 aaPredicted RBP17.32■□□□□ 0.36
CTHRC1-201ENST00000330295 ATP5JP18859 108 aa17.32■□□□□ 0.36
CTHRC1-201ENST00000330295 LPIN1Q14693 890 aa17.32■□□□□ 0.36
CTHRC1-201ENST00000330295 HSP90AB4PQ58FF6 505 aa17.32■□□□□ 0.36
CTHRC1-201ENST00000330295 CES5AQ6NT32 575 aa17.32■□□□□ 0.36
CTHRC1-201ENST00000330295 SUMF1Q8NBK3 374 aa17.32■□□□□ 0.36
CTHRC1-201ENST00000330295 FRMPD2Q68DX3 1309 aaPredicted RBP17.31■□□□□ 0.36
CTHRC1-201ENST00000330295 DCDC2BA2VCK2 349 aa17.31■□□□□ 0.36
CTHRC1-201ENST00000330295 FSCN2O14926 492 aa17.31■□□□□ 0.36
CTHRC1-201ENST00000330295 SORBS3O60504 671 aa17.31■□□□□ 0.36
CTHRC1-201ENST00000330295 EIF3JO75822 258 aaKnown RBP17.31■□□□□ 0.36
CTHRC1-201ENST00000330295 TPRNQ4KMQ1 711 aa17.31■□□□□ 0.36
CTHRC1-201ENST00000330295 CELF3Q5SZQ8 465 aaKnown RBP17.31■□□□□ 0.36
CTHRC1-201ENST00000330295 NPAS4Q8IUM7 802 aa17.31■□□□□ 0.36
CTHRC1-201ENST00000330295 SIX5Q8N196 739 aa17.31■□□□□ 0.36
CTHRC1-201ENST00000330295 SYTL5Q8TDW5 730 aaPredicted RBP17.31■□□□□ 0.36
CTHRC1-201ENST00000330295 RMDN3Q96TC7 470 aa17.31■□□□□ 0.36
CTHRC1-201ENST00000330295 ADAM7Q9H2U9 754 aa17.31■□□□□ 0.36
CTHRC1-201ENST00000330295 GPCPD1Q9NPB8 672 aa17.31■□□□□ 0.36
CTHRC1-201ENST00000330295 SETD4Q9NVD3 440 aa17.31■□□□□ 0.36
CTHRC1-201ENST00000330295 COL20A1Q9P218 1284 aa17.31■□□□□ 0.36
CTHRC1-201ENST00000330295 FBXL21Q9UKT6 434 aa17.31■□□□□ 0.36
CTHRC1-201ENST00000330295 CDV3Q9UKY7 258 aaKnown RBP17.31■□□□□ 0.36
CTHRC1-201ENST00000330295 PCDHB12Q9Y5F1 795 aa17.31■□□□□ 0.36
CTHRC1-201ENST00000330295 APPP05067 770 aa17.3■□□□□ 0.36
CTHRC1-201ENST00000330295 SLC3A2P08195 630 aaKnown RBP17.3■□□□□ 0.36
CTHRC1-201ENST00000330295 ITIH3Q06033 890 aa17.3■□□□□ 0.36
CTHRC1-201ENST00000330295 CEP85Q6P2H3 762 aa17.3■□□□□ 0.36
CTHRC1-201ENST00000330295 PLCD3Q8N3E9 789 aa17.3■□□□□ 0.36
CTHRC1-201ENST00000330295 LINC01599Q8WXQ3 324 aa17.3■□□□□ 0.36
CTHRC1-201ENST00000330295 MAF1Q9H063 256 aa17.3■□□□□ 0.36
CTHRC1-201ENST00000330295 BCL11AQ9H165 835 aa17.3■□□□□ 0.36
CTHRC1-201ENST00000330295 SH2B1Q9NRF2 756 aaPredicted RBP17.3■□□□□ 0.36
CTHRC1-201ENST00000330295 TSPY2A6NKD2 308 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms