RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 KIF28PB7ZC32 967 aa18.83■□□□□ 0.6
LRRC42-201ENST00000319223 H3BRB1 525 aa18.83■□□□□ 0.6
LRRC42-201ENST00000319223 MOXD1Q6UVY6 613 aa18.83■□□□□ 0.6
LRRC42-201ENST00000319223 TUT1Q9H6E5 874 aaKnown RBP18.83■□□□□ 0.6
LRRC42-201ENST00000319223 TMEM39AQ9NV64 488 aa18.83■□□□□ 0.6
LRRC42-201ENST00000319223 SMC3Q9UQE7 1217 aa18.83■□□□□ 0.6
LRRC42-201ENST00000319223 CEP290O15078 2479 aa18.83■□□□□ 0.6
LRRC42-201ENST00000319223 GDF6Q6KF10 455 aaPredicted RBP18.82■□□□□ 0.6
LRRC42-201ENST00000319223 SLC5A5Q92911 643 aa18.82■□□□□ 0.6
LRRC42-201ENST00000319223 DDX25Q9UHL0 483 aaKnown RBP18.82■□□□□ 0.6
LRRC42-201ENST00000319223 TBX21Q9UL17 535 aa18.82■□□□□ 0.6
LRRC42-201ENST00000319223 KIAA0355O15063 1070 aa18.81■□□□□ 0.6
LRRC42-201ENST00000319223 CCNT1O60563 726 aaKnown RBP18.81■□□□□ 0.6
LRRC42-201ENST00000319223 ATG7O95352 703 aa18.81■□□□□ 0.6
LRRC42-201ENST00000319223 MDM2Q00987 491 aaPredicted RBP18.81■□□□□ 0.6
LRRC42-201ENST00000319223 SAFBQ15424 915 aaKnown RBP eCLIP18.81■□□□□ 0.6
LRRC42-201ENST00000319223 PPP4R3AQ6IN85 833 aa18.81■□□□□ 0.6
LRRC42-201ENST00000319223 ETNPPLQ8TBG4 499 aa18.81■□□□□ 0.6
LRRC42-201ENST00000319223 SNX21Q969T3 373 aa18.81■□□□□ 0.6
LRRC42-201ENST00000319223 CTAGE1Q96RT6 745 aa18.81■□□□□ 0.6
LRRC42-201ENST00000319223 KATNAL1Q9BW62 490 aa18.81■□□□□ 0.6
LRRC42-201ENST00000319223 SEZ6LQ9BYH1 1024 aa18.81■□□□□ 0.6
LRRC42-201ENST00000319223 RNPEPQ9H4A4 650 aa18.81■□□□□ 0.6
LRRC42-201ENST00000319223 TBC1D22BQ9NU19 505 aa18.81■□□□□ 0.6
LRRC42-201ENST00000319223 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.81■□□□□ 0.6
LRRC42-201ENST00000319223 K7ELQ4 463 aaPredicted RBP18.8■□□□□ 0.6
LRRC42-201ENST00000319223 TLR3O15455 904 aaKnown RBP18.8■□□□□ 0.6
LRRC42-201ENST00000319223 LGR5O75473 907 aa18.8■□□□□ 0.6
LRRC42-201ENST00000319223 CYP2C9P11712 490 aa18.8■□□□□ 0.6
LRRC42-201ENST00000319223 ZNF200P98182 395 aaPredicted RBP18.8■□□□□ 0.6
LRRC42-201ENST00000319223 SESTD1Q86VW0 696 aa18.8■□□□□ 0.6
LRRC42-201ENST00000319223 C7orf31Q8N865 590 aa18.8■□□□□ 0.6
LRRC42-201ENST00000319223 FOXD4L1Q9NU39 408 aa18.8■□□□□ 0.6
LRRC42-201ENST00000319223 GTF2IRD1Q9UHL9 959 aa18.8■□□□□ 0.6
LRRC42-201ENST00000319223 UMODL1Q5DID0 1318 aa18.8■□□□□ 0.6
LRRC42-201ENST00000319223 RBAK-RBAKDNI3L0D1 243 aa18.8■□□□□ 0.6
LRRC42-201ENST00000319223 MARK3P27448 753 aa18.8■□□□□ 0.6
LRRC42-201ENST00000319223 MAGEA10P43363 369 aaPredicted RBP18.8■□□□□ 0.6
LRRC42-201ENST00000319223 PTPN11Q06124 597 aaPredicted RBP18.8■□□□□ 0.6
LRRC42-201ENST00000319223 ABHD15Q6UXT9 468 aa18.8■□□□□ 0.6
LRRC42-201ENST00000319223 BADQ92934 168 aa18.8■□□□□ 0.6
LRRC42-201ENST00000319223 FOXP1Q9H334 677 aaPredicted RBP18.8■□□□□ 0.6
LRRC42-201ENST00000319223 PRKAG2Q9UGJ0 569 aa18.8■□□□□ 0.6
LRRC42-201ENST00000319223 IGKV6D-21A0A0A0MT36 114 aa18.79■□□□□ 0.6
LRRC42-201ENST00000319223 PSMD10O75832 226 aa18.79■□□□□ 0.6
LRRC42-201ENST00000319223 ATP2B1P20020 1258 aa18.79■□□□□ 0.6
LRRC42-201ENST00000319223 LRCH2Q5VUJ6 765 aa18.79■□□□□ 0.6
LRRC42-201ENST00000319223 CHRDL2Q6WN34 429 aa18.79■□□□□ 0.6
LRRC42-201ENST00000319223 POTEDQ86YR6 584 aa18.79■□□□□ 0.6
LRRC42-201ENST00000319223 HAS1Q92839 578 aa18.79■□□□□ 0.6
LRRC42-201ENST00000319223 GLG1Q92896 1179 aa18.79■□□□□ 0.6
LRRC42-201ENST00000319223 RIT2Q99578 217 aa18.79■□□□□ 0.6
LRRC42-201ENST00000319223 GDF15Q99988 308 aa18.79■□□□□ 0.6
LRRC42-201ENST00000319223 PPP1R12CQ9BZL4 782 aa18.79■□□□□ 0.6
LRRC42-201ENST00000319223 LTBP2Q14767 1821 aa18.79■□□□□ 0.6
LRRC42-201ENST00000319223 SUPT20HL2P0C7V6 817 aa18.78■□□□□ 0.6
LRRC42-201ENST00000319223 SMIM10L2AP0DMW4 78 aa18.78■□□□□ 0.6
LRRC42-201ENST00000319223 SMIM10L2BP0DMW5 78 aa18.78■□□□□ 0.6
LRRC42-201ENST00000319223 GCFC2P16383 781 aaKnown RBP18.78■□□□□ 0.6
LRRC42-201ENST00000319223 PTGISQ16647 500 aa18.78■□□□□ 0.6
LRRC42-201ENST00000319223 ZNF746Q6NUN9 644 aaPredicted RBP18.78■□□□□ 0.6
LRRC42-201ENST00000319223 CCDC60Q8IWA6 550 aaPredicted RBP18.78■□□□□ 0.6
LRRC42-201ENST00000319223 UNC45AQ9H3U1 944 aa18.78■□□□□ 0.6
LRRC42-201ENST00000319223 SMARCAD1Q9H4L7 1026 aa18.78■□□□□ 0.6
LRRC42-201ENST00000319223 KCNMB3Q9NPA1 279 aa18.78■□□□□ 0.6
LRRC42-201ENST00000319223 EMSYQ7Z589 1322 aa18.78■□□□□ 0.6
LRRC42-201ENST00000319223 GAS7O60861 476 aa18.77■□□□□ 0.6
LRRC42-201ENST00000319223 RAG1P15918 1043 aa18.77■□□□□ 0.6
LRRC42-201ENST00000319223 U2AF2P26368 475 aaKnown RBP eCLIP18.77■□□□□ 0.6
LRRC42-201ENST00000319223 B3GNT9Q6UX72 402 aa18.77■□□□□ 0.6
LRRC42-201ENST00000319223 NOSTRINQ8IVI9 506 aa18.77■□□□□ 0.6
LRRC42-201ENST00000319223 TEKT3Q9BXF9 490 aa18.77■□□□□ 0.6
LRRC42-201ENST00000319223 PRO3102Q9H379 93 aa18.77■□□□□ 0.6
LRRC42-201ENST00000319223 SETD4Q9NVD3 440 aa18.77■□□□□ 0.6
LRRC42-201ENST00000319223 ZNF215Q9UL58 517 aaPredicted RBP18.77■□□□□ 0.6
LRRC42-201ENST00000319223 COLQQ9Y215 455 aaPredicted RBP18.77■□□□□ 0.6
LRRC42-201ENST00000319223 KIF3AQ9Y496 699 aa18.77■□□□□ 0.6
LRRC42-201ENST00000319223 CHMP2AO43633 222 aa18.77■□□□□ 0.59
LRRC42-201ENST00000319223 TIMP1P01033 207 aa18.77■□□□□ 0.59
LRRC42-201ENST00000319223 HOXC8P31273 242 aa18.77■□□□□ 0.59
LRRC42-201ENST00000319223 CYP2C18P33260 490 aa18.77■□□□□ 0.59
LRRC42-201ENST00000319223 STAT5BP51692 787 aa18.77■□□□□ 0.59
LRRC42-201ENST00000319223 KRT76Q01546 638 aa18.77■□□□□ 0.59
LRRC42-201ENST00000319223 LARP1BQ659C4 914 aaKnown RBP18.77■□□□□ 0.59
LRRC42-201ENST00000319223 SWSAP1Q6NVH7 229 aa18.77■□□□□ 0.59
LRRC42-201ENST00000319223 DHX38Q92620 1227 aaKnown RBP18.77■□□□□ 0.59
LRRC42-201ENST00000319223 WNT8BQ93098 351 aa18.77■□□□□ 0.59
LRRC42-201ENST00000319223 NOC4LQ9BVI4 516 aaKnown RBP18.77■□□□□ 0.59
LRRC42-201ENST00000319223 ERAP1Q9NZ08 941 aa18.77■□□□□ 0.59
LRRC42-201ENST00000319223 ATP4AP20648 1035 aa18.76■□□□□ 0.59
LRRC42-201ENST00000319223 GNL2Q13823 731 aaKnown RBP18.76■□□□□ 0.59
LRRC42-201ENST00000319223 NBR1Q14596 966 aa18.76■□□□□ 0.59
LRRC42-201ENST00000319223 NAP1L4Q99733 375 aaKnown RBP18.76■□□□□ 0.59
LRRC42-201ENST00000319223 HIPK3Q9H422 1215 aa18.76■□□□□ 0.59
LRRC42-201ENST00000319223 AZI2Q9H6S1 392 aa18.76■□□□□ 0.59
LRRC42-201ENST00000319223 TRIP12Q14669 1992 aaPredicted RBP18.76■□□□□ 0.59
LRRC42-201ENST00000319223 BACH1O14867 736 aa18.75■□□□□ 0.59
LRRC42-201ENST00000319223 TOB1P50616 345 aaPredicted RBP18.75■□□□□ 0.59
LRRC42-201ENST00000319223 MCTP1Q6DN14 999 aa18.75■□□□□ 0.59
LRRC42-201ENST00000319223 MIS18BP1Q6P0N0 1132 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms