RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 SRP68Q9UHB9 627 aaKnown RBP20.98■□□□□ 0.95
RTN4-201ENST00000317610 KDM3AQ9Y4C1 1321 aa20.98■□□□□ 0.95
RTN4-201ENST00000317610 MEFVO15553 781 aaPredicted RBP20.98■□□□□ 0.95
RTN4-201ENST00000317610 FOCADQ5VW36 1801 aa20.98■□□□□ 0.95
RTN4-201ENST00000317610 NAA35Q5VZE5 725 aa20.98■□□□□ 0.95
RTN4-201ENST00000317610 FRMPD2Q68DX3 1309 aaPredicted RBP20.98■□□□□ 0.95
RTN4-201ENST00000317610 CCDC24Q8N4L8 307 aa20.98■□□□□ 0.95
RTN4-201ENST00000317610 NT5C3AQ9H0P0 336 aa20.98■□□□□ 0.95
RTN4-201ENST00000317610 BMP2KQ9NSY1 1161 aaPredicted RBP20.98■□□□□ 0.95
RTN4-201ENST00000317610 ANKIB1Q9P2G1 1089 aa20.98■□□□□ 0.95
RTN4-201ENST00000317610 ADAMTS1Q9UHI8 967 aa20.98■□□□□ 0.95
RTN4-201ENST00000317610 PACSIN2Q9UNF0 486 aaPredicted RBP20.98■□□□□ 0.95
RTN4-201ENST00000317610 FSBPO95073 299 aa20.97■□□□□ 0.95
RTN4-201ENST00000317610 PLCG2P16885 1265 aa20.97■□□□□ 0.95
RTN4-201ENST00000317610 FNTAP49354 379 aa20.97■□□□□ 0.95
RTN4-201ENST00000317610 GUCY1A3Q02108 690 aa20.97■□□□□ 0.95
RTN4-201ENST00000317610 ITGB3BPQ13352 177 aaPredicted RBP20.97■□□□□ 0.95
RTN4-201ENST00000317610 TRADDQ15628 312 aa20.97■□□□□ 0.95
RTN4-201ENST00000317610 MCTP2Q6DN12 878 aa20.97■□□□□ 0.95
RTN4-201ENST00000317610 SMIM5Q71RC9 77 aa20.97■□□□□ 0.95
RTN4-201ENST00000317610 CCDC65Q8IXS2 484 aa20.97■□□□□ 0.95
RTN4-201ENST00000317610 FAM133AQ8N9E0 248 aa20.97■□□□□ 0.95
RTN4-201ENST00000317610 SCFD2Q8WU76 684 aa20.97■□□□□ 0.95
RTN4-201ENST00000317610 PBKQ96KB5 322 aa20.97■□□□□ 0.95
RTN4-201ENST00000317610 CEP89Q96ST8 783 aa20.97■□□□□ 0.95
RTN4-201ENST00000317610 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.97■□□□□ 0.95
RTN4-201ENST00000317610 DDX25Q9UHL0 483 aaKnown RBP20.97■□□□□ 0.95
RTN4-201ENST00000317610 GGA2Q9UJY4 613 aa20.97■□□□□ 0.95
RTN4-201ENST00000317610 ARFGEF1Q9Y6D6 1849 aa20.97■□□□□ 0.95
RTN4-201ENST00000317610 ATP8B3O60423 1300 aa20.97■□□□□ 0.95
RTN4-201ENST00000317610 SLC26A4O43511 780 aa20.96■□□□□ 0.95
RTN4-201ENST00000317610 ECHS1P30084 290 aa20.96■□□□□ 0.95
RTN4-201ENST00000317610 MDH1P40925 334 aaKnown RBP20.96■□□□□ 0.95
RTN4-201ENST00000317610 TNNI2P48788 182 aa20.96■□□□□ 0.95
RTN4-201ENST00000317610 DNA2P51530 1060 aa20.96■□□□□ 0.95
RTN4-201ENST00000317610 USP11P51784 963 aa20.96■□□□□ 0.95
RTN4-201ENST00000317610 RHBDL3P58872 404 aa20.96■□□□□ 0.95
RTN4-201ENST00000317610 DPY19L2P1Q6NXN4 242 aa20.96■□□□□ 0.95
RTN4-201ENST00000317610 PRPF38AQ8NAV1 312 aaKnown RBP20.96■□□□□ 0.95
RTN4-201ENST00000317610 SCFD1Q8WVM8 642 aa20.96■□□□□ 0.95
RTN4-201ENST00000317610 TMBIM4Q9HC24 238 aa20.96■□□□□ 0.95
RTN4-201ENST00000317610 AHDC1Q5TGY3 1603 aaPredicted RBP20.96■□□□□ 0.95
RTN4-201ENST00000317610 ZPR1O75312 459 aa20.96■□□□□ 0.95
RTN4-201ENST00000317610 HNRNPH1P31943 449 aaKnown RBP20.96■□□□□ 0.95
RTN4-201ENST00000317610 CUL1Q13616 776 aa20.96■□□□□ 0.95
RTN4-201ENST00000317610 RPS6KA1Q15418 735 aa20.96■□□□□ 0.95
RTN4-201ENST00000317610 EDRF1Q3B7T1 1238 aa20.96■□□□□ 0.95
RTN4-201ENST00000317610 RC3H1Q5TC82 1133 aaKnown RBP20.96■□□□□ 0.95
RTN4-201ENST00000317610 PPP4R3CPQ6ZMV5 832 aa20.96■□□□□ 0.95
RTN4-201ENST00000317610 MICALCLQ6ZW33 695 aa20.96■□□□□ 0.95
RTN4-201ENST00000317610 ACTRT1Q8TDG2 376 aa20.96■□□□□ 0.95
RTN4-201ENST00000317610 ZNF473Q8WTR7 871 aaKnown RBP20.96■□□□□ 0.95
RTN4-201ENST00000317610 TAF4BQ92750 862 aa20.96■□□□□ 0.95
RTN4-201ENST00000317610 PLAAQ9Y263 795 aa20.96■□□□□ 0.95
RTN4-201ENST00000317610 SPATA31A5Q5VU36 1347 aa20.95■□□□□ 0.95
RTN4-201ENST00000317610 SPATA31A7Q8IWB4 1347 aa20.95■□□□□ 0.95
RTN4-201ENST00000317610 KIF4AO95239 1232 aa20.95■□□□□ 0.94
RTN4-201ENST00000317610 ZBTB48P10074 688 aaPredicted RBP20.95■□□□□ 0.94
RTN4-201ENST00000317610 GCFC2P16383 781 aaKnown RBP20.95■□□□□ 0.94
RTN4-201ENST00000317610 ERVK-9P63128 1117 aa20.95■□□□□ 0.94
RTN4-201ENST00000317610 GRAPQ13588 217 aa20.95■□□□□ 0.94
RTN4-201ENST00000317610 KCNV1Q6PIU1 500 aa20.95■□□□□ 0.94
RTN4-201ENST00000317610 GRAPLQ8TC17 118 aaPredicted RBP20.95■□□□□ 0.94
RTN4-201ENST00000317610 FAM163AQ96GL9 167 aaPredicted RBP20.95■□□□□ 0.94
RTN4-201ENST00000317610 CALR3Q96L12 384 aaKnown RBP20.95■□□□□ 0.94
RTN4-201ENST00000317610 MTMR4Q9NYA4 1195 aa20.95■□□□□ 0.94
RTN4-201ENST00000317610 FRMD3A2A2Y4 597 aa20.95■□□□□ 0.94
RTN4-201ENST00000317610 RPS6KA4O75676 772 aa20.95■□□□□ 0.94
RTN4-201ENST00000317610 KIAA0754O94854 1291 aa20.95■□□□□ 0.94
RTN4-201ENST00000317610 BARGINQ6ZT62 677 aa20.95■□□□□ 0.94
RTN4-201ENST00000317610 IRF2BP2Q7Z5L9 587 aa20.95■□□□□ 0.94
RTN4-201ENST00000317610 SLC51AQ86UW1 340 aa20.95■□□□□ 0.94
RTN4-201ENST00000317610 LRRC57Q8N9N7 239 aa20.95■□□□□ 0.94
RTN4-201ENST00000317610 PNMA6FA0A0J9YX94 578 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 H0YGN5 161 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 FBXW10Q5XX13 1052 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 NELFCDQ8IXH7 590 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 OTUD6BQ8N6M0 293 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 NFS1Q9Y697 457 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 IGKV6D-41A0A0C4DH26 115 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 PLA2G4BP0C869 781 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 KCNQ4P56696 695 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 ARID5AQ03989 594 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 KCNH2Q12809 1159 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 IFI16Q16666 785 aaKnown RBP20.94■□□□□ 0.94
RTN4-201ENST00000317610 UBE2SQ16763 222 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 NLRP14Q86W24 1093 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 KLHL7Q8IXQ5 586 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 MYCBPAPQ8TBZ2 947 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 EMILIN3Q9NT22 766 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 TBC1D7Q9P0N9 293 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 NENFQ9UMX5 172 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 PCDHA12Q9UN75 941 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 BZW2Q9Y6E2 419 aaKnown RBP20.94■□□□□ 0.94
RTN4-201ENST00000317610 C10orf71Q711Q0 1435 aa20.94■□□□□ 0.94
RTN4-201ENST00000317610 KCNK3O14649 394 aa20.93■□□□□ 0.94
RTN4-201ENST00000317610 PPP1R11O60927 126 aaPredicted RBP20.93■□□□□ 0.94
RTN4-201ENST00000317610 PTK2Q05397 1052 aa20.93■□□□□ 0.94
RTN4-201ENST00000317610 ADAM9Q13443 819 aa20.93■□□□□ 0.94
RTN4-201ENST00000317610 CEP85LQ5SZL2 805 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms