RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 CLNS1AP54105 237 aaKnown RBP12.2□□□□□ -0.46
PTPN7-201ENST00000309017 GSCP56915 257 aaPredicted RBP12.2□□□□□ -0.46
PTPN7-201ENST00000309017 ADAM9Q13443 819 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 BIRC3Q13489 604 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 CYB5D1Q6P9G0 228 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 LRRC55Q6ZSA7 311 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 BRINP3Q76B58 766 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 PNMA8AQ86V59 439 aaPredicted RBP12.2□□□□□ -0.46
PTPN7-201ENST00000309017 LZTS2Q9BRK4 669 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 ZMYND12Q9H0C1 365 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 NOC2LQ9Y3T9 749 aaKnown RBP12.2□□□□□ -0.46
PTPN7-201ENST00000309017 FRMPD2Q68DX3 1309 aaPredicted RBP12.2□□□□□ -0.46
PTPN7-201ENST00000309017 ATXN2Q99700 1313 aaKnown RBP12.2□□□□□ -0.46
PTPN7-201ENST00000309017 GOLGB1Q14789 3259 aaKnown RBP12.2□□□□□ -0.46
PTPN7-201ENST00000309017 CTNND1O60716 968 aaKnown RBP12.2□□□□□ -0.46
PTPN7-201ENST00000309017 NTSR2O95665 410 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 BAG3O95817 575 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 LDHBP07195 334 aaKnown RBP12.2□□□□□ -0.46
PTPN7-201ENST00000309017 COASYQ13057 564 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 DIXDC1Q155Q3 683 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 CCDC65Q8IXS2 484 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 BANK1Q8NDB2 785 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 GJA10Q969M2 543 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 ZNF287Q9HBT7 754 aa12.2□□□□□ -0.46
PTPN7-201ENST00000309017 ALS2Q96Q42 1657 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 CETN3O15182 167 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 ACTN1P12814 892 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 ELF1P32519 619 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 ZNF844Q08AG5 666 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 NAA25Q14CX7 972 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 C12orf60Q5U649 245 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 ANKS4BQ8N8V4 417 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 PBKQ96KB5 322 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 EYA3Q99504 573 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 PARP4Q9UKK3 1724 aaKnown RBP12.19□□□□□ -0.46
PTPN7-201ENST00000309017 QPCTQ16769 361 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 ASTE1Q2TB18 679 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-201ENST00000309017 SBK1Q52WX2 424 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 HIBCHQ6NVY1 386 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-201ENST00000309017 ALKBH5Q6P6C2 394 aaKnown RBP12.19□□□□□ -0.46
PTPN7-201ENST00000309017 LRIG3Q6UXM1 1119 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 CCDC50Q8IVM0 306 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 UHMK1Q8TAS1 419 aaKnown RBP12.19□□□□□ -0.46
PTPN7-201ENST00000309017 MDM1Q8TC05 714 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 SH3RF3Q8TEJ3 882 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-201ENST00000309017 NUDT12Q9BQG2 462 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 BSDC1Q9NW68 430 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-201ENST00000309017 M0R2N6 131 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 ADCY7P51828 1080 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 EIF6P56537 245 aaKnown RBP12.19□□□□□ -0.46
PTPN7-201ENST00000309017 DRP2Q13474 957 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 PROM2Q8N271 834 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 RAPGEF5Q92565 580 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 HVCN1Q96D96 273 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 FAM212AQ96EL1 285 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 PNMA5Q96PV4 448 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 CELF4Q9BZC1 486 aaKnown RBP12.19□□□□□ -0.46
PTPN7-201ENST00000309017 SWAP70Q9UH65 585 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 CEP83Q9Y592 693 aa12.19□□□□□ -0.46
PTPN7-201ENST00000309017 COL18A1P39060 1754 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 MYH3P11055 1940 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 TTI1O43156 1089 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 SLC37A4O43826 429 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 FLOT1O75955 427 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 VIMP08670 466 aaKnown RBP12.18□□□□□ -0.46
PTPN7-201ENST00000309017 PTK2Q05397 1052 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 DDR1Q08345 913 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 SLC35G1Q2M3R5 365 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 C3orf67Q6ZVT6 689 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 KCNK18Q7Z418 384 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 LMBR1Q8WVP7 490 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 PCDHGC5Q9Y5F6 944 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 CLTAP09496 248 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 KCNH2Q12809 1159 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 PSMD2Q13200 908 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 PLCB4Q15147 1175 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 GPBP1Q86WP2 473 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 U2AF1L4Q8WU68 220 aaKnown RBP12.18□□□□□ -0.46
PTPN7-201ENST00000309017 TCP11Q8WWU5 503 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 SGSM3Q96HU1 749 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 GPCPD1Q9NPB8 672 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 ANKIB1Q9P2G1 1089 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 LEMD3Q9Y2U8 911 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 ABCB11O95342 1321 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 SRCAPQ6ZRS2 3230 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 CAMTA2O94983 1202 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 GNA14O95837 355 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 KRT13P13646 458 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 NR2F2P24468 414 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 DYDC1Q8WWB3 177 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 PSMD1Q99460 953 aa12.18□□□□□ -0.46
PTPN7-201ENST00000309017 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.18□□□□□ -0.46
PTPN7-201ENST00000309017 TRAPPC3O43617 180 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 H2AFZP0C0S5 128 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 ITGA4P13612 1032 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 USP11P51784 963 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 RPS8P62241 208 aaKnown RBP12.17□□□□□ -0.46
PTPN7-201ENST00000309017 H2AFVQ71UI9 128 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 FUKQ8N0W3 1084 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 METTL13Q8N6R0 699 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms