RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 PGM5Q15124 567 aa24.96■■□□□ 1.59
PDLIM2-202ENST00000308354 GPR162Q16538 588 aa24.96■■□□□ 1.59
PDLIM2-202ENST00000308354 PCNX4Q63HM2 1172 aa24.96■■□□□ 1.59
PDLIM2-202ENST00000308354 SYT2Q8N9I0 419 aaPredicted RBP24.96■■□□□ 1.59
PDLIM2-202ENST00000308354 CPLX3Q8WVH0 158 aa24.96■■□□□ 1.59
PDLIM2-202ENST00000308354 THAP9Q9H5L6 903 aa24.96■■□□□ 1.59
PDLIM2-202ENST00000308354 SPDYE16A6NNV3 312 aaPredicted RBP24.96■■□□□ 1.59
PDLIM2-202ENST00000308354 RBL2Q08999 1139 aa24.96■■□□□ 1.59
PDLIM2-202ENST00000308354 TKFCQ3LXA3 575 aa24.96■■□□□ 1.59
PDLIM2-202ENST00000308354 COBLL1Q53SF7 1204 aa24.96■■□□□ 1.59
PDLIM2-202ENST00000308354 HERC4Q5GLZ8 1057 aaPredicted RBP24.96■■□□□ 1.59
PDLIM2-202ENST00000308354 FAM26FQ5R3K3 315 aa24.96■■□□□ 1.59
PDLIM2-202ENST00000308354 CENPPQ6IPU0 288 aa24.96■■□□□ 1.59
PDLIM2-202ENST00000308354 TEKT3Q9BXF9 490 aa24.96■■□□□ 1.59
PDLIM2-202ENST00000308354 RABGAP1Q9Y3P9 1069 aa24.96■■□□□ 1.59
PDLIM2-202ENST00000308354 AKR1B15C9JRZ8 316 aaPredicted RBP24.95■■□□□ 1.58
PDLIM2-202ENST00000308354 KIF2AO00139 706 aaPredicted RBP24.95■■□□□ 1.58
PDLIM2-202ENST00000308354 STX10O60499 249 aa24.95■■□□□ 1.58
PDLIM2-202ENST00000308354 CCDC65Q8IXS2 484 aa24.95■■□□□ 1.58
PDLIM2-202ENST00000308354 CDCA5Q96FF9 252 aa24.95■■□□□ 1.58
PDLIM2-202ENST00000308354 GTPBP4Q9BZE4 634 aaKnown RBP24.95■■□□□ 1.58
PDLIM2-202ENST00000308354 WRAP73Q9P2S5 460 aaPredicted RBP24.95■■□□□ 1.58
PDLIM2-202ENST00000308354 STK24Q9Y6E0 443 aa24.95■■□□□ 1.58
PDLIM2-202ENST00000308354 PES1O00541 588 aaKnown RBP24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 NKRFO15226 690 aaKnown RBP eCLIP24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 PPP1R2P41236 205 aa24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 PSMD2Q13200 908 aa24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 TTLL12Q14166 644 aaPredicted RBP24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 EAPPQ56P03 285 aaPredicted RBP24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 ARHGEF16Q5VV41 709 aa24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 PPFIBP1Q86W92 1011 aa24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 GUF1Q8N442 669 aaKnown RBP24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 KIF18AQ8NI77 898 aa24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 OTUD5Q96G74 571 aa24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 REEP2Q9BRK0 252 aa24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 BCAS3Q9H6U6 928 aa24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 PXMP2Q9NR77 195 aa24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 UBIAD1Q9Y5Z9 338 aa24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 CCP110O43303 1012 aa24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 CTIFO43310 598 aaKnown RBP24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 MTMR1Q13613 665 aa24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 GIT2Q14161 759 aa24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 SH3D19Q5HYK7 790 aa24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 PDCD2LQ9BRP1 358 aa24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 RUSC1Q9BVN2 902 aa24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 MAP3K20Q9NYL2 800 aaKnown RBP24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 MAGEC2Q9UBF1 373 aaPredicted RBP24.94■■□□□ 1.58
PDLIM2-202ENST00000308354 IRF6O14896 467 aa24.93■■□□□ 1.58
PDLIM2-202ENST00000308354 IREB2P48200 963 aaKnown RBP24.93■■□□□ 1.58
PDLIM2-202ENST00000308354 ITGB3BPQ13352 177 aaPredicted RBP24.93■■□□□ 1.58
PDLIM2-202ENST00000308354 BANK1Q8NDB2 785 aa24.93■■□□□ 1.58
PDLIM2-202ENST00000308354 RBM46Q8TBY0 533 aaKnown RBP24.93■■□□□ 1.58
PDLIM2-202ENST00000308354 L3MBTL3Q96JM7 780 aaPredicted RBP24.93■■□□□ 1.58
PDLIM2-202ENST00000308354 HOXC10Q9NYD6 342 aa24.93■■□□□ 1.58
PDLIM2-202ENST00000308354 PNMA2Q9UL42 364 aa24.93■■□□□ 1.58
PDLIM2-202ENST00000308354 PCDHA2Q9Y5H9 948 aa24.93■■□□□ 1.58
PDLIM2-202ENST00000308354 USP50Q70EL3 339 aaPredicted RBP24.93■■□□□ 1.58
PDLIM2-202ENST00000308354 TEX13BQ9BXU2 312 aa24.93■■□□□ 1.58
PDLIM2-202ENST00000308354 JADE2Q9NQC1 790 aa24.93■■□□□ 1.58
PDLIM2-202ENST00000308354 RSPH10B2B2RC85 870 aa24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 RSPH10BP0C881 870 aa24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 EEF1GP26641 437 aaKnown RBP24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 UBXN1Q04323 297 aa24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 B3GNT9Q6UX72 402 aa24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 SYT10Q6XYQ8 523 aa24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 TOGARAM2Q6ZUX3 1019 aa24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 REXO1L1PQ8IX06 675 aa24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 MYOCDQ8IZQ8 938 aa24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 CNOT6LQ96LI5 555 aaKnown RBP24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 PANX2Q96RD6 677 aa24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 RIT2Q99578 217 aa24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 AGO4Q9HCK5 861 aaKnown RBP24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 TUFT1Q9NNX1 390 aa24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 PPP2R2CQ9Y2T4 447 aa24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 TESPA1A2RU30 521 aaPredicted RBP24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 DHX15O43143 795 aaKnown RBP24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 EYA4O95677 639 aa24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 GYPCP04921 128 aa24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 BCRP11274 1271 aa24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 OAZ1P54368 228 aa24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 GADL1Q6ZQY3 521 aa24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 NELFCDQ8IXH7 590 aa24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 ZNF710Q8N1W2 664 aa24.92■■□□□ 1.58
PDLIM2-202ENST00000308354 FRMPD4Q14CM0 1322 aa24.91■■□□□ 1.58
PDLIM2-202ENST00000308354 ITIH6Q6UXX5 1313 aa24.91■■□□□ 1.58
PDLIM2-202ENST00000308354 MFAP3LO75121 409 aa24.91■■□□□ 1.58
PDLIM2-202ENST00000308354 ERCC3P19447 782 aa24.91■■□□□ 1.58
PDLIM2-202ENST00000308354 CASP14P31944 242 aa24.91■■□□□ 1.58
PDLIM2-202ENST00000308354 NOC3LQ8WTT2 800 aaKnown RBP24.91■■□□□ 1.58
PDLIM2-202ENST00000308354 OTOFQ9HC10 1997 aa24.91■■□□□ 1.58
PDLIM2-202ENST00000308354 ATP9AO75110 1047 aa24.9■■□□□ 1.58
PDLIM2-202ENST00000308354 LXNQ9BS40 222 aa24.9■■□□□ 1.58
PDLIM2-202ENST00000308354 TUBGCP2Q9BSJ2 902 aa24.9■■□□□ 1.58
PDLIM2-202ENST00000308354 WDR90Q96KV7 1748 aa24.9■■□□□ 1.58
PDLIM2-202ENST00000308354 FRMD3A2A2Y4 597 aa24.9■■□□□ 1.58
PDLIM2-202ENST00000308354 SFI1A8K8P3 1242 aa24.9■■□□□ 1.58
PDLIM2-202ENST00000308354 B4DLN1 442 aa24.9■■□□□ 1.58
PDLIM2-202ENST00000308354 ZSCAN12O43309 604 aa24.9■■□□□ 1.58
PDLIM2-202ENST00000308354 FXR1P51114 621 aaKnown RBP eCLIP24.9■■□□□ 1.58
PDLIM2-202ENST00000308354 CASP5P51878 434 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms