RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 ZBTB5O15062 677 aa17.29■□□□□ 0.36
USP42-201ENST00000306177 NDUFA10O95299 355 aa17.29■□□□□ 0.36
USP42-201ENST00000306177 OATP04181 439 aa17.29■□□□□ 0.36
USP42-201ENST00000306177 EPHB4P54760 987 aa17.29■□□□□ 0.36
USP42-201ENST00000306177 ALX1Q15699 326 aa17.29■□□□□ 0.36
USP42-201ENST00000306177 AP5M1Q9H0R1 490 aa17.29■□□□□ 0.36
USP42-201ENST00000306177 DAAM1Q9Y4D1 1078 aa17.29■□□□□ 0.36
USP42-201ENST00000306177 NEXMIFQ5QGS0 1516 aa17.29■□□□□ 0.36
USP42-201ENST00000306177 TTBK2Q6IQ55 1244 aa17.29■□□□□ 0.36
USP42-201ENST00000306177 MRPL47Q9HD33 250 aaKnown RBP17.29■□□□□ 0.36
USP42-201ENST00000306177 USP17L5A8MUK1 530 aa17.29■□□□□ 0.36
USP42-201ENST00000306177 HEXIM1O94992 359 aaKnown RBP17.29■□□□□ 0.36
USP42-201ENST00000306177 CTTNQ14247 550 aaKnown RBP17.29■□□□□ 0.36
USP42-201ENST00000306177 KRT31Q15323 416 aa17.29■□□□□ 0.36
USP42-201ENST00000306177 ENAHQ8N8S7 591 aaPredicted RBP17.29■□□□□ 0.36
USP42-201ENST00000306177 BHMT2Q9H2M3 363 aa17.29■□□□□ 0.36
USP42-201ENST00000306177 VCXQ9H320 206 aa17.29■□□□□ 0.36
USP42-201ENST00000306177 JRKLQ9Y4A0 524 aa17.29■□□□□ 0.36
USP42-201ENST00000306177 EIF2AK2P19525 551 aaKnown RBP17.29■□□□□ 0.36
USP42-201ENST00000306177 TFAMQ00059 246 aaKnown RBP17.29■□□□□ 0.36
USP42-201ENST00000306177 ITKQ08881 620 aa17.29■□□□□ 0.36
USP42-201ENST00000306177 PODNQ7Z5L7 613 aa17.29■□□□□ 0.36
USP42-201ENST00000306177 CDKL2Q92772 493 aa17.29■□□□□ 0.36
USP42-201ENST00000306177 SYNJ2BP-COX16A0A087WUM0 186 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 MB21D1Q8N884 522 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 PBKQ96KB5 322 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 HINFPQ9BQA5 517 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 ZNF341Q9BYN7 854 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 COX16Q9P0S2 106 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.28■□□□□ 0.36
USP42-201ENST00000306177 TAB3Q8N5C8 712 aaPredicted RBP17.28■□□□□ 0.36
USP42-201ENST00000306177 LY9Q9HBG7 655 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 BCAP29Q9UHQ4 241 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 MOCS3O95396 460 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 ATP1A3P13637 1013 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 SCARF1Q14162 830 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 MAP7Q14244 749 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 UNC13DQ70J99 1090 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 ATG9AQ7Z3C6 839 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 SLC44A5Q8NCS7 719 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 BCAS4Q8TDM0 211 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 MAD1L1Q9Y6D9 718 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 MYO3BQ8WXR4 1341 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 SGK1O00141 431 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 MED7O43513 233 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 HSPA6P17066 643 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 DDIT3P35638 169 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 IREB2P48200 963 aaKnown RBP17.28■□□□□ 0.36
USP42-201ENST00000306177 PCDHA13Q9Y5I0 950 aa17.28■□□□□ 0.36
USP42-201ENST00000306177 MROH7-TTC4A0A0A0MT08 1334 aa17.27■□□□□ 0.36
USP42-201ENST00000306177 UTYO14607 1347 aa17.27■□□□□ 0.36
USP42-201ENST00000306177 YWHAGP61981 247 aaKnown RBP eCLIP17.27■□□□□ 0.36
USP42-201ENST00000306177 PSMD6Q15008 389 aa17.27■□□□□ 0.36
USP42-201ENST00000306177 SGO2Q562F6 1265 aa17.27■□□□□ 0.36
USP42-201ENST00000306177 PDXDC2PQ6P474 469 aa17.27■□□□□ 0.36
USP42-201ENST00000306177 EPB41L5Q9HCM4 733 aa17.27■□□□□ 0.36
USP42-201ENST00000306177 SLC27A3Q5K4L6 730 aa17.27■□□□□ 0.36
USP42-201ENST00000306177 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.27■□□□□ 0.36
USP42-201ENST00000306177 SPTLC3Q9NUV7 552 aa17.27■□□□□ 0.36
USP42-201ENST00000306177 GARSP41250 739 aaKnown RBP17.27■□□□□ 0.35
USP42-201ENST00000306177 SNAP25P60880 206 aa17.27■□□□□ 0.35
USP42-201ENST00000306177 CUL4BQ13620 913 aa17.27■□□□□ 0.35
USP42-201ENST00000306177 SURF1Q15526 300 aa17.27■□□□□ 0.35
USP42-201ENST00000306177 PPP1R18Q6NYC8 613 aa17.27■□□□□ 0.35
USP42-201ENST00000306177 PCDHA6Q9UN73 950 aa17.27■□□□□ 0.35
USP42-201ENST00000306177 PCDHA8Q9Y5H6 950 aa17.27■□□□□ 0.35
USP42-201ENST00000306177 GSG1L2A8MUP6 293 aa17.27■□□□□ 0.35
USP42-201ENST00000306177 NMT2O60551 498 aa17.27■□□□□ 0.35
USP42-201ENST00000306177 SARM1Q6SZW1 724 aa17.27■□□□□ 0.35
USP42-201ENST00000306177 SNX25Q9H3E2 840 aa17.27■□□□□ 0.35
USP42-201ENST00000306177 ECEL1O95672 775 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 FTCDO95954 541 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 RNF207Q6ZRF8 634 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 PFDN6O15212 129 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 MFAP3LO75121 409 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 DNAJC24Q6P3W2 148 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 PHLDB2Q86SQ0 1253 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 FAM84BQ96KN1 310 aaPredicted RBP17.26■□□□□ 0.35
USP42-201ENST00000306177 GJD4Q96KN9 370 aaPredicted RBP17.26■□□□□ 0.35
USP42-201ENST00000306177 NBPF3Q9H094 633 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 TDRD3Q9H7E2 651 aaKnown RBP17.26■□□□□ 0.35
USP42-201ENST00000306177 PRPSAP1Q14558 356 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 NFIXQ14938 502 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 RAB3IPQ96QF0 476 aaPredicted RBP17.26■□□□□ 0.35
USP42-201ENST00000306177 SPZ1Q9BXG8 430 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 GDAQ9Y2T3 454 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 CPS1P31327 1500 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 GOLGA8SH3BPF8 625 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 ECE2O60344 883 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 JAK3P52333 1124 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 RPS6KA2Q15349 733 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 NLRP7Q8WX94 980 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 FAM149B1Q96BN6 582 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 PLA2G12BQ9BX93 195 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 PIM2Q9P1W9 311 aa17.26■□□□□ 0.35
USP42-201ENST00000306177 PPP1R12CQ9BZL4 782 aa17.25■□□□□ 0.35
USP42-201ENST00000306177 ALDH8A1Q9H2A2 487 aaPredicted RBP17.25■□□□□ 0.35
USP42-201ENST00000306177 CPVLQ9H3G5 476 aa17.25■□□□□ 0.35
USP42-201ENST00000306177 BAIAP2L1Q9UHR4 511 aa17.25■□□□□ 0.35
USP42-201ENST00000306177 GRM4Q14833 912 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms