RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 SPICE1Q8N0Z3 855 aa14.47□□□□□ -0.09
DDX54-201ENST00000306014 RAD54LQ92698 747 aa14.47□□□□□ -0.09
DDX54-201ENST00000306014 SFI1A8K8P3 1242 aa14.47□□□□□ -0.09
DDX54-201ENST00000306014 GUCY1A3Q02108 690 aa14.47□□□□□ -0.09
DDX54-201ENST00000306014 COASYQ13057 564 aa14.47□□□□□ -0.09
DDX54-201ENST00000306014 SEPT2Q15019 361 aa14.47□□□□□ -0.09
DDX54-201ENST00000306014 CCDC63Q8NA47 563 aa14.47□□□□□ -0.09
DDX54-201ENST00000306014 BHMT2Q9H2M3 363 aa14.47□□□□□ -0.09
DDX54-201ENST00000306014 CNTNAP5Q8WYK1 1306 aa14.46□□□□□ -0.09
DDX54-201ENST00000306014 hCG_1984214I3L0E3 225 aa14.46□□□□□ -0.09
DDX54-201ENST00000306014 RPSAP08865 295 aaKnown RBP14.46□□□□□ -0.09
DDX54-201ENST00000306014 CUL1Q13616 776 aa14.46□□□□□ -0.09
DDX54-201ENST00000306014 TBC1D10BQ4KMP7 808 aaPredicted RBP14.46□□□□□ -0.09
DDX54-201ENST00000306014 LIN9Q5TKA1 542 aa14.46□□□□□ -0.09
DDX54-201ENST00000306014 CAPN12Q6ZSI9 719 aa14.46□□□□□ -0.09
DDX54-201ENST00000306014 ZNF713Q8N859 430 aaPredicted RBP14.46□□□□□ -0.09
DDX54-201ENST00000306014 LARSQ9P2J5 1176 aaKnown RBP14.46□□□□□ -0.09
DDX54-201ENST00000306014 SERPINA10Q9UK55 444 aa14.46□□□□□ -0.09
DDX54-201ENST00000306014 EXOC7Q9UPT5 735 aa14.46□□□□□ -0.09
DDX54-201ENST00000306014 CEP83Q9Y592 693 aa14.46□□□□□ -0.09
DDX54-201ENST00000306014 DUSP10Q9Y6W6 482 aa14.46□□□□□ -0.09
DDX54-201ENST00000306014 LRRIQ3A6PVS8 624 aaPredicted RBP14.46□□□□□ -0.09
DDX54-201ENST00000306014 MYL7Q01449 175 aa14.46□□□□□ -0.09
DDX54-201ENST00000306014 HHATQ5VTY9 493 aa14.46□□□□□ -0.09
DDX54-201ENST00000306014 GIMAP8Q8ND71 665 aaPredicted RBP14.46□□□□□ -0.09
DDX54-201ENST00000306014 KLHL14Q9P2G3 628 aa14.46□□□□□ -0.09
DDX54-201ENST00000306014 AGTPBP1Q9UPW5 1226 aa14.46□□□□□ -0.09
DDX54-201ENST00000306014 THAP12O43422 761 aa14.46□□□□□ -0.09
DDX54-201ENST00000306014 ZNF131P52739 623 aa14.46□□□□□ -0.09
DDX54-201ENST00000306014 ZKSCAN8Q15776 578 aaPredicted RBP14.46□□□□□ -0.09
DDX54-201ENST00000306014 C10orf76Q5T2E6 689 aa14.46□□□□□ -0.09
DDX54-201ENST00000306014 MCTP2Q6DN12 878 aa14.46□□□□□ -0.09
DDX54-201ENST00000306014 PROM2Q8N271 834 aa14.46□□□□□ -0.09
DDX54-201ENST00000306014 ANKZF1Q9H8Y5 726 aa14.46□□□□□ -0.09
DDX54-201ENST00000306014 ANKRD26Q9UPS8 1709 aa14.46□□□□□ -0.1
DDX54-201ENST00000306014 FRMD3A2A2Y4 597 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 IFNB1P01574 187 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 MSANTD4Q8NCY6 345 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 JDP2Q8WYK2 163 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 IFT172Q9UG01 1749 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 KDM6AO15550 1401 aaPredicted RBP14.45□□□□□ -0.1
DDX54-201ENST00000306014 PNMA6FA0A0J9YX94 578 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 POTEB3A0JP26 581 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 POTECB2RU33 542 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 POTEBQ6S5H4 581 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 CLEC4GQ6UXB4 293 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 MIER3Q7Z3K6 550 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 VPS37BQ9H9H4 285 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 PASKQ96RG2 1323 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 USP17L15C9J2P7 530 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 USP17L13C9JLJ4 530 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 USP17L11C9JVI0 530 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 USP17L18D6R9N7 530 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 USP17L22D6RA61 530 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 USP17L17D6RBQ6 530 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 USP17L19D6RCP7 530 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 USP17L20D6RJB6 530 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 KRT14P02533 472 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 USP17L24Q0WX57 530 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 TBX2Q13207 712 aaPredicted RBP14.45□□□□□ -0.1
DDX54-201ENST00000306014 LRCH2Q5VUJ6 765 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 CDKAL1Q5VV42 579 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 HIBCHQ6NVY1 386 aaPredicted RBP14.45□□□□□ -0.1
DDX54-201ENST00000306014 PDXDC1Q6P996 788 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 USP17L6PQ6QN14 398 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 ZNF34Q8IZ26 560 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 NEK9Q8TD19 979 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 MICAL1Q8TDZ2 1067 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 FAM217BQ9NTX9 383 aaPredicted RBP14.45□□□□□ -0.1
DDX54-201ENST00000306014 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.45□□□□□ -0.1
DDX54-201ENST00000306014 PLEKP08567 350 aaPredicted RBP14.45□□□□□ -0.1
DDX54-201ENST00000306014 ATP2A2P16615 1042 aaKnown RBP14.45□□□□□ -0.1
DDX54-201ENST00000306014 BMP6P22004 513 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 DR1Q01658 176 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 ARHGEF2Q92974 986 aaKnown RBP14.45□□□□□ -0.1
DDX54-201ENST00000306014 SMC6Q96SB8 1091 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 SH2D4AQ9H788 454 aa14.45□□□□□ -0.1
DDX54-201ENST00000306014 CCDC188H7C350 402 aa14.44□□□□□ -0.1
DDX54-201ENST00000306014 FOSP01100 380 aaPredicted RBP14.44□□□□□ -0.1
DDX54-201ENST00000306014 SLC8A1P32418 973 aa14.44□□□□□ -0.1
DDX54-201ENST00000306014 FAM133BQ5BKY9 247 aaKnown RBP14.44□□□□□ -0.1
DDX54-201ENST00000306014 EARS2Q5JPH6 523 aaKnown RBP14.44□□□□□ -0.1
DDX54-201ENST00000306014 FYB2Q5VWT5 728 aa14.44□□□□□ -0.1
DDX54-201ENST00000306014 LACRTQ9GZZ8 138 aa14.44□□□□□ -0.1
DDX54-201ENST00000306014 PCIF1Q9H4Z3 704 aa14.44□□□□□ -0.1
DDX54-201ENST00000306014 RBM12Q9NTZ6 932 aaKnown RBP14.44□□□□□ -0.1
DDX54-201ENST00000306014 ZRANB2O95218 330 aaKnown RBP eCLIP14.44□□□□□ -0.1
DDX54-201ENST00000306014 SNX1Q13596 522 aa14.44□□□□□ -0.1
DDX54-201ENST00000306014 DCUN1D2Q6PH85 259 aa14.44□□□□□ -0.1
DDX54-201ENST00000306014 CCDC13Q8IYE1 715 aa14.44□□□□□ -0.1
DDX54-201ENST00000306014 KCND1Q9NSA2 647 aa14.44□□□□□ -0.1
DDX54-201ENST00000306014 EHD2Q9NZN4 543 aa14.44□□□□□ -0.1
DDX54-201ENST00000306014 SNX24Q9Y343 169 aa14.44□□□□□ -0.1
DDX54-201ENST00000306014 PDS5AQ29RF7 1337 aaKnown RBP14.44□□□□□ -0.1
DDX54-201ENST00000306014 DLATP10515 647 aaKnown RBP14.44□□□□□ -0.1
DDX54-201ENST00000306014 SARSP49591 514 aaKnown RBP14.44□□□□□ -0.1
DDX54-201ENST00000306014 IRAK1P51617 712 aa14.44□□□□□ -0.1
DDX54-201ENST00000306014 SNAP25P60880 206 aa14.44□□□□□ -0.1
DDX54-201ENST00000306014 C12orf60Q5U649 245 aa14.44□□□□□ -0.1
DDX54-201ENST00000306014 NSMFQ6X4W1 530 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms