RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ANKRD40Q6AI12 368 aa16.12■□□□□ 0.17
SHCBP1-201ENST00000303383 ARMCX5Q6P1M9 558 aa16.12■□□□□ 0.17
SHCBP1-201ENST00000303383 CCDC112Q8NEF3 446 aa16.12■□□□□ 0.17
SHCBP1-201ENST00000303383 PIGOQ8TEQ8 1089 aa16.12■□□□□ 0.17
SHCBP1-201ENST00000303383 UNC45AQ9H3U1 944 aa16.12■□□□□ 0.17
SHCBP1-201ENST00000303383 CCND2P30279 289 aa16.12■□□□□ 0.17
SHCBP1-201ENST00000303383 UBXN1Q04323 297 aa16.12■□□□□ 0.17
SHCBP1-201ENST00000303383 SH3D19Q5HYK7 790 aa16.12■□□□□ 0.17
SHCBP1-201ENST00000303383 TTI2Q6NXR4 508 aa16.12■□□□□ 0.17
SHCBP1-201ENST00000303383 ERO1BQ86YB8 467 aa16.12■□□□□ 0.17
SHCBP1-201ENST00000303383 KCTD17Q8N5Z5 321 aa16.12■□□□□ 0.17
SHCBP1-201ENST00000303383 SYT2Q8N9I0 419 aaPredicted RBP16.12■□□□□ 0.17
SHCBP1-201ENST00000303383 CPLX3Q8WVH0 158 aa16.12■□□□□ 0.17
SHCBP1-201ENST00000303383 DNAJC19Q96DA6 116 aa16.12■□□□□ 0.17
SHCBP1-201ENST00000303383 PXMP2Q9NR77 195 aa16.12■□□□□ 0.17
SHCBP1-201ENST00000303383 RPTORQ8N122 1335 aa16.12■□□□□ 0.17
SHCBP1-201ENST00000303383 SPDYE16A6NNV3 312 aaPredicted RBP16.11■□□□□ 0.17
SHCBP1-201ENST00000303383 EYA4O95677 639 aa16.11■□□□□ 0.17
SHCBP1-201ENST00000303383 BCRP11274 1271 aa16.11■□□□□ 0.17
SHCBP1-201ENST00000303383 SLC12A3P55017 1021 aa16.11■□□□□ 0.17
SHCBP1-201ENST00000303383 EPHA7Q15375 998 aa16.11■□□□□ 0.17
SHCBP1-201ENST00000303383 NIPA1Q7RTP0 329 aa16.11■□□□□ 0.17
SHCBP1-201ENST00000303383 PDCD2LQ9BRP1 358 aa16.11■□□□□ 0.17
SHCBP1-201ENST00000303383 JADE2Q9NQC1 790 aa16.11■□□□□ 0.17
SHCBP1-201ENST00000303383 ZNF214Q9UL59 606 aaPredicted RBP16.11■□□□□ 0.17
SHCBP1-201ENST00000303383 MYPNQ86TC9 1320 aa16.11■□□□□ 0.17
SHCBP1-201ENST00000303383 PPATQ06203 517 aa16.11■□□□□ 0.17
SHCBP1-201ENST00000303383 NACC1Q96RE7 527 aa16.11■□□□□ 0.17
SHCBP1-201ENST00000303383 ZNF408Q9H9D4 720 aa16.11■□□□□ 0.17
SHCBP1-201ENST00000303383 OFD1O75665 1012 aa16.11■□□□□ 0.17
SHCBP1-201ENST00000303383 MOB2Q70IA6 237 aa16.11■□□□□ 0.17
SHCBP1-201ENST00000303383 NLRX1Q86UT6 975 aa16.11■□□□□ 0.17
SHCBP1-201ENST00000303383 NSUN6Q8TEA1 469 aaKnown RBP16.11■□□□□ 0.17
SHCBP1-201ENST00000303383 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.11■□□□□ 0.179e-7■□□□□ 11
SHCBP1-201ENST00000303383 IRF6O14896 467 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 GHRHRQ02643 423 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 ANKRD35Q8N283 1001 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 PCMTD1Q96MG8 357 aaPredicted RBP16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 PAGR1Q9BTK6 254 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 TBC1D22BQ9NU19 505 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 UBIAD1Q9Y5Z9 338 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 PHIPQ8WWQ0 1821 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 FAM13AO94988 1023 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 CCZ1BP86790 482 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 CCZ1P86791 482 aaPredicted RBP16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 COBLL1Q53SF7 1204 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 TREML2Q5T2D2 321 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 NELFCDQ8IXH7 590 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 CLMNQ96JQ2 1002 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 CNOT6LQ96LI5 555 aaKnown RBP16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 PURBQ96QR8 312 aaKnown RBP16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 SLITRK3O94933 977 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 MRPS9P82933 396 aaKnown RBP16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 LRRC63Q05C16 580 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 GOLGA8FQ08AF8 430 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 GOLGA8DPQ0D2H9 430 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 PNMA8AQ86V59 439 aaPredicted RBP16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 BANK1Q8NDB2 785 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 NEK9Q8TD19 979 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 HSD17B14Q9BPX1 270 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 LXNQ9BS40 222 aa16.1■□□□□ 0.17
SHCBP1-201ENST00000303383 AKR1B15C9JRZ8 316 aaPredicted RBP16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 NR3C2P08235 984 aa16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 ADKP55263 362 aaKnown RBP16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 REPS2Q8NFH8 660 aa16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 REEP2Q9BRK0 252 aa16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 TAF1DQ9H5J8 278 aaPredicted RBP16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 AGO4Q9HCK5 861 aaKnown RBP16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 ADAMTS5Q9UNA0 930 aa16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 ARHGEF35A5YM69 484 aa16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 CENPPQ6IPU0 288 aa16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 XRRA1Q6P2D8 792 aa16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 DUSP9Q99956 384 aaKnown RBP16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 TUBGCP2Q9BSJ2 902 aa16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 TRMT1Q9NXH9 659 aaKnown RBP16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 COL4A3BPQ9Y5P4 624 aa16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 ZC3H4Q9UPT8 1303 aaKnown RBP16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 TRAF5O00463 557 aa16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 MUTP22033 750 aa16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 NOC4LQ9BVI4 516 aaKnown RBP16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 SEMA6BQ9H3T3 888 aa16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 SPTLC3Q9NUV7 552 aa16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 R3HCC1Q9Y3T6 440 aaKnown RBP16.09■□□□□ 0.17
SHCBP1-201ENST00000303383 SRCAPQ6ZRS2 3230 aa16.08■□□□□ 0.17
SHCBP1-201ENST00000303383 ATP2A1O14983 1001 aa16.08■□□□□ 0.16
SHCBP1-201ENST00000303383 GIT2Q14161 759 aa16.08■□□□□ 0.16
SHCBP1-201ENST00000303383 FKBP15Q5T1M5 1219 aa16.08■□□□□ 0.16
SHCBP1-201ENST00000303383 TRMT1LQ7Z2T5 733 aaKnown RBP16.08■□□□□ 0.16
SHCBP1-201ENST00000303383 NCAPG2Q86XI2 1143 aa16.08■□□□□ 0.16
SHCBP1-201ENST00000303383 MB21D1Q8N884 522 aa16.08■□□□□ 0.16
SHCBP1-201ENST00000303383 PROCA1Q8NCQ7 364 aaPredicted RBP16.08■□□□□ 0.16
SHCBP1-201ENST00000303383 LRRC10BA6NIK2 292 aa16.08■□□□□ 0.16
SHCBP1-201ENST00000303383 CXCL11O14625 94 aa16.08■□□□□ 0.16
SHCBP1-201ENST00000303383 ARSHQ5FYA8 562 aa16.08■□□□□ 0.16
SHCBP1-201ENST00000303383 APTXQ7Z2E3 356 aaKnown RBP16.08■□□□□ 0.16
SHCBP1-201ENST00000303383 CHST13Q8NET6 341 aa16.08■□□□□ 0.16
SHCBP1-201ENST00000303383 C16orf45Q96MC5 204 aaPredicted RBP16.08■□□□□ 0.16
SHCBP1-201ENST00000303383 MRPL44Q9H9J2 332 aaKnown RBP16.08■□□□□ 0.16
SHCBP1-201ENST00000303383 A1CFQ9NQ94 594 aaKnown RBP16.08■□□□□ 0.16
SHCBP1-201ENST00000303383 P4HBP07237 508 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms