RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 EIF3CLB5ME19 914 aaKnown RBP15.39■□□□□ 0.05
SDC2-201ENST00000302190 MAGEA9P43362 315 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 TMEM139Q8IV31 216 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 CCDC170Q8IYT3 715 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 BICD1Q96G01 975 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 CABS1Q96KC9 395 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 AK8Q96MA6 479 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 EIF3CQ99613 913 aaKnown RBP15.39■□□□□ 0.05
SDC2-201ENST00000302190 CXorf56Q9H5V9 222 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 FAM53CQ9NYF3 392 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 FAM184BQ9ULE4 1060 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 SPOPO43791 374 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 FLOT1O75955 427 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 ZRANB2O95218 330 aaKnown RBP eCLIP15.39■□□□□ 0.05
SDC2-201ENST00000302190 ACTN1P12814 892 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 BAG6P46379 1132 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 IFNAR2P48551 515 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 RSRC2Q7L4I2 434 aaKnown RBP15.39■□□□□ 0.05
SDC2-201ENST00000302190 HDAC7Q8WUI4 952 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 BHMT2Q9H2M3 363 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 L1RE1Q9UN81 338 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 PLA2G4BP0C869 781 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 HARSP12081 509 aaKnown RBP15.39■□□□□ 0.05
SDC2-201ENST00000302190 FAM83BQ5T0W9 1011 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 SLFN13Q68D06 897 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 PDXDC2PQ6P474 469 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 SLC30A10Q6XR72 485 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 CCDC127Q96BQ5 260 aa15.39■□□□□ 0.05
SDC2-201ENST00000302190 RBM17Q96I25 401 aaKnown RBP15.39■□□□□ 0.05
SDC2-201ENST00000302190 AKR1B1P15121 316 aa15.38■□□□□ 0.05
SDC2-201ENST00000302190 SEPT7Q16181 437 aaKnown RBP15.38■□□□□ 0.05
SDC2-201ENST00000302190 FAM212AQ96EL1 285 aa15.38■□□□□ 0.05
SDC2-201ENST00000302190 STIM2Q9P246 746 aa15.38■□□□□ 0.05
SDC2-201ENST00000302190 FRMD4BQ9Y2L6 1034 aa15.38■□□□□ 0.05
SDC2-201ENST00000302190 MYH3P11055 1940 aa15.38■□□□□ 0.05
SDC2-201ENST00000302190 ANKRD36CQ5JPF3 1778 aa15.38■□□□□ 0.05
SDC2-201ENST00000302190 ORC4O43929 436 aa15.38■□□□□ 0.05
SDC2-201ENST00000302190 EEF2P13639 858 aaKnown RBP15.38■□□□□ 0.05
SDC2-201ENST00000302190 SLCO1A2P46721 670 aa15.38■□□□□ 0.05
SDC2-201ENST00000302190 SF3B3Q15393 1217 aaKnown RBP15.38■□□□□ 0.05
SDC2-201ENST00000302190 CCDC50Q8IVM0 306 aa15.38■□□□□ 0.05
SDC2-201ENST00000302190 RETREG2Q8NC44 543 aa15.38■□□□□ 0.05
SDC2-201ENST00000302190 DDX47Q9H0S4 455 aaKnown RBP15.38■□□□□ 0.05
SDC2-201ENST00000302190 PCIF1Q9H4Z3 704 aa15.38■□□□□ 0.05
SDC2-201ENST00000302190 CD209Q9NNX6 404 aa15.38■□□□□ 0.05
SDC2-201ENST00000302190 GRM4Q14833 912 aa15.38■□□□□ 0.05
SDC2-201ENST00000302190 GALNT17Q6IS24 598 aa15.38■□□□□ 0.05
SDC2-201ENST00000302190 PACS2Q86VP3 889 aa15.38■□□□□ 0.05
SDC2-201ENST00000302190 LMBR1Q8WVP7 490 aa15.38■□□□□ 0.05
SDC2-201ENST00000302190 ATP8A1Q9Y2Q0 1164 aa15.38■□□□□ 0.05
SDC2-201ENST00000302190 ZSCAN5CA6NGD5 496 aaPredicted RBP15.37■□□□□ 0.05
SDC2-201ENST00000302190 CCDC169A6NNP5 214 aa15.37■□□□□ 0.05
SDC2-201ENST00000302190 H2AFZP0C0S5 128 aa15.37■□□□□ 0.05
SDC2-201ENST00000302190 STAT1P42224 750 aa15.37■□□□□ 0.05
SDC2-201ENST00000302190 GRIPAP1Q4V328 841 aa15.37■□□□□ 0.05
SDC2-201ENST00000302190 H2AFVQ71UI9 128 aa15.37■□□□□ 0.05
SDC2-201ENST00000302190 NT5C3AQ9H0P0 336 aa15.37■□□□□ 0.05
SDC2-201ENST00000302190 EHD4Q9H223 541 aa15.37■□□□□ 0.05
SDC2-201ENST00000302190 PTPN22Q9Y2R2 807 aa15.37■□□□□ 0.05
SDC2-201ENST00000302190 SRGNP10124 158 aa15.37■□□□□ 0.05
SDC2-201ENST00000302190 GPSM2P81274 684 aa15.37■□□□□ 0.05
SDC2-201ENST00000302190 PPP1R7Q15435 360 aa15.37■□□□□ 0.05
SDC2-201ENST00000302190 GLIS3Q8NEA6 775 aa15.37■□□□□ 0.05
SDC2-201ENST00000302190 HERVK_113P62684 666 aa15.37■□□□□ 0.05
SDC2-201ENST00000302190 TNIP1Q15025 636 aa15.37■□□□□ 0.05
SDC2-201ENST00000302190 IL17AQ16552 155 aa15.37■□□□□ 0.05
SDC2-201ENST00000302190 PNMA8AQ86V59 439 aaPredicted RBP15.37■□□□□ 0.05
SDC2-201ENST00000302190 GIMAP8Q8ND71 665 aaPredicted RBP15.37■□□□□ 0.05
SDC2-201ENST00000302190 DNAJC17Q9NVM6 304 aaKnown RBP15.37■□□□□ 0.05
SDC2-201ENST00000302190 UTP11Q9Y3A2 253 aaKnown RBP15.37■□□□□ 0.05
SDC2-201ENST00000302190 LY75O60449 1722 aa15.37■□□□□ 0.05
SDC2-201ENST00000302190 LAD1O00515 517 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 FANCGO15287 622 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 KRT5P13647 590 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 CTTNQ14247 550 aaKnown RBP15.36■□□□□ 0.05
SDC2-201ENST00000302190 GRIK5Q16478 980 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 TMED8Q6PL24 325 aaPredicted RBP15.36■□□□□ 0.05
SDC2-201ENST00000302190 DDX42Q86XP3 938 aaKnown RBP eCLIP15.36■□□□□ 0.05
SDC2-201ENST00000302190 CCDC26Q8TAB7 109 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 RBM12Q9NTZ6 932 aaKnown RBP15.36■□□□□ 0.05
SDC2-201ENST00000302190 STXBP3O00186 592 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 RASA1P20936 1047 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 EPHB4P54760 987 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 GUCY1A3Q02108 690 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 CERKLQ49MI3 558 aaPredicted RBP15.36■□□□□ 0.05
SDC2-201ENST00000302190 ALKBH5Q6P6C2 394 aaKnown RBP15.36■□□□□ 0.05
SDC2-201ENST00000302190 UNC13DQ70J99 1090 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 NLGN1Q8N2Q7 840 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 OR2W6PQ8NHA6 318 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 CUEDC2Q9H467 287 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 IL17RBQ9NRM6 502 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 HDAC9Q9UKV0 1011 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 SLC37A4O43826 429 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 TTLL1O95922 423 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 TAL1P17542 331 aaPredicted RBP15.36■□□□□ 0.05
SDC2-201ENST00000302190 ICA1Q05084 483 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 COASYQ13057 564 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 ZNF211Q13398 564 aaPredicted RBP15.36■□□□□ 0.05
SDC2-201ENST00000302190 CAPN12Q6ZSI9 719 aa15.36■□□□□ 0.05
SDC2-201ENST00000302190 ARFGAP2Q8N6H7 521 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms