RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 POLR2FP61218 127 aaKnown RBP11.92□□□□□ -0.5
ZNF558-201ENST00000301475 ZNF384Q8TF68 577 aa11.92□□□□□ -0.5
ZNF558-201ENST00000301475 PSMD1Q99460 953 aa11.92□□□□□ -0.5
ZNF558-201ENST00000301475 FAM129AQ9BZQ8 928 aa11.92□□□□□ -0.5
ZNF558-201ENST00000301475 TCP11L1Q9NUJ3 509 aa11.92□□□□□ -0.5
ZNF558-201ENST00000301475 CEP72Q9P209 647 aa11.92□□□□□ -0.5
ZNF558-201ENST00000301475 PNMA2Q9UL42 364 aa11.92□□□□□ -0.5
ZNF558-201ENST00000301475 SHANK3Q9BYB0 1731 aa11.92□□□□□ -0.5
ZNF558-201ENST00000301475 CTNND1O60716 968 aaKnown RBP11.92□□□□□ -0.5
ZNF558-201ENST00000301475 GRIK3Q13003 919 aa11.92□□□□□ -0.5
ZNF558-201ENST00000301475 RPS6KA1Q15418 735 aa11.92□□□□□ -0.5
ZNF558-201ENST00000301475 C11orf91Q3C1V1 193 aa11.92□□□□□ -0.5
ZNF558-201ENST00000301475 DHX37Q8IY37 1157 aaKnown RBP11.92□□□□□ -0.5
ZNF558-201ENST00000301475 CCDC197Q8NCU1 140 aa11.92□□□□□ -0.5
ZNF558-201ENST00000301475 TAF4BQ92750 862 aa11.92□□□□□ -0.5
ZNF558-201ENST00000301475 TLCD1Q96CP7 247 aa11.92□□□□□ -0.5
ZNF558-201ENST00000301475 RSRC1Q96IZ7 334 aaKnown RBP11.92□□□□□ -0.5
ZNF558-201ENST00000301475 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.92□□□□□ -0.5
ZNF558-201ENST00000301475 BRIP1Q9BX63 1249 aa11.92□□□□□ -0.5
ZNF558-201ENST00000301475 EDEM3Q9BZQ6 932 aa11.92□□□□□ -0.5
ZNF558-201ENST00000301475 KANSL2Q9H9L4 492 aa11.92□□□□□ -0.5
ZNF558-201ENST00000301475 AMACRQ9UHK6 382 aa11.92□□□□□ -0.5
ZNF558-201ENST00000301475 NOC2LQ9Y3T9 749 aaKnown RBP11.92□□□□□ -0.5
ZNF558-201ENST00000301475 CLTAP09496 248 aa11.91□□□□□ -0.5
ZNF558-201ENST00000301475 OR52Z1P0C646 297 aa11.91□□□□□ -0.5
ZNF558-201ENST00000301475 CDC25CP30307 473 aa11.91□□□□□ -0.5
ZNF558-201ENST00000301475 USP11P51784 963 aa11.91□□□□□ -0.5
ZNF558-201ENST00000301475 DYMQ7RTS9 669 aa11.91□□□□□ -0.5
ZNF558-201ENST00000301475 CCDC63Q8NA47 563 aa11.91□□□□□ -0.5
ZNF558-201ENST00000301475 LSM14BQ9BX40 385 aaKnown RBP11.91□□□□□ -0.5
ZNF558-201ENST00000301475 MTFR1LQ9H019 292 aa11.91□□□□□ -0.5
ZNF558-201ENST00000301475 ASAP1Q9ULH1 1129 aa11.91□□□□□ -0.5
ZNF558-201ENST00000301475 C15orf41Q9Y2V0 281 aa11.91□□□□□ -0.5
ZNF558-201ENST00000301475 LAD1O00515 517 aa11.91□□□□□ -0.5
ZNF558-201ENST00000301475 INHBEP58166 350 aa11.91□□□□□ -0.5
ZNF558-201ENST00000301475 DHX9Q08211 1270 aaKnown RBP11.91□□□□□ -0.5
ZNF558-201ENST00000301475 MTMR3Q13615 1198 aa11.91□□□□□ -0.5
ZNF558-201ENST00000301475 RAPGEF1Q13905 1077 aa11.91□□□□□ -0.5
ZNF558-201ENST00000301475 NKX1-1Q15270 411 aaPredicted RBP11.91□□□□□ -0.5
ZNF558-201ENST00000301475 LRRC41Q15345 812 aa11.91□□□□□ -0.5
ZNF558-201ENST00000301475 PNMA8AQ86V59 439 aaPredicted RBP11.91□□□□□ -0.5
ZNF558-201ENST00000301475 GUF1Q8N442 669 aaKnown RBP11.91□□□□□ -0.5
ZNF558-201ENST00000301475 FAM133AQ8N9E0 248 aa11.91□□□□□ -0.5
ZNF558-201ENST00000301475 AK8Q96MA6 479 aa11.91□□□□□ -0.5
ZNF558-201ENST00000301475 CELF4Q9BZC1 486 aaKnown RBP11.91□□□□□ -0.5
ZNF558-201ENST00000301475 SH3GLB2Q9NR46 395 aa11.91□□□□□ -0.5
ZNF558-201ENST00000301475 BLOC1S4Q9NUP1 217 aa11.91□□□□□ -0.5
ZNF558-201ENST00000301475 TMOD3Q9NYL9 352 aa11.91□□□□□ -0.5
ZNF558-201ENST00000301475 TTI1O43156 1089 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 CAND2O75155 1236 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 CYP2D6P10635 497 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 TECP42680 631 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 TMED8Q6PL24 325 aaPredicted RBP11.9□□□□□ -0.5
ZNF558-201ENST00000301475 TBC1D1Q86TI0 1168 aaPredicted RBP11.9□□□□□ -0.5
ZNF558-201ENST00000301475 ACTRT1Q8TDG2 376 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 AGAP11Q8TF27 550 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 ATXN2LQ8WWM7 1075 aaKnown RBP11.9□□□□□ -0.5
ZNF558-201ENST00000301475 AGAP1Q9UPQ3 857 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 WTIPA6NIX2 430 aaPredicted RBP11.9□□□□□ -0.5
ZNF558-201ENST00000301475 CES2O00748 559 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 ANP32DO95626 131 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 CHN1P15882 459 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 IRX1P78414 480 aaPredicted RBP11.9□□□□□ -0.5
ZNF558-201ENST00000301475 LRRC63Q05C16 580 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 LETM2Q2VYF4 491 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 CRELD2Q6UXH1 353 aaPredicted RBP11.9□□□□□ -0.5
ZNF558-201ENST00000301475 UNC13DQ70J99 1090 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 BZW1Q7L1Q6 419 aaKnown RBP11.9□□□□□ -0.5
ZNF558-201ENST00000301475 HEATR3Q7Z4Q2 680 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 METTL13Q8N6R0 699 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 LRRC57Q8N9N7 239 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 SYN2Q92777 582 aaPredicted RBP11.9□□□□□ -0.5
ZNF558-201ENST00000301475 ZNF570Q96NI8 536 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 DPH5Q9H2P9 285 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 ADAM7Q9H2U9 754 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 KCNMB3Q9NPA1 279 aa11.9□□□□□ -0.5
ZNF558-201ENST00000301475 LUC7LQ9NQ29 371 aaKnown RBP11.9□□□□□ -0.5
ZNF558-201ENST00000301475 COL4A1P02462 1669 aa11.9□□□□□ -0.51
ZNF558-201ENST00000301475 EME2A4GXA9 379 aaPredicted RBP11.89□□□□□ -0.51
ZNF558-201ENST00000301475 PGRMC1O00264 195 aaKnown RBP11.89□□□□□ -0.51
ZNF558-201ENST00000301475 CYTH3O43739 400 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 MMEP08473 750 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 AMPD3Q01432 767 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 GRB10Q13322 594 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 FAM133BQ5BKY9 247 aaKnown RBP11.89□□□□□ -0.51
ZNF558-201ENST00000301475 DAGLBQ8NCG7 672 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 ZNF483Q8TF39 744 aaPredicted RBP11.89□□□□□ -0.51
ZNF558-201ENST00000301475 LMBR1Q8WVP7 490 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 SPDL1Q96EA4 605 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 L3MBTL3Q96JM7 780 aaPredicted RBP11.89□□□□□ -0.51
ZNF558-201ENST00000301475 CALR3Q96L12 384 aaKnown RBP11.89□□□□□ -0.51
ZNF558-201ENST00000301475 PANK4Q9NVE7 773 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 SWAP70Q9UH65 585 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 LAMB1P07942 1786 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 STXBP3O00186 592 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 CCNT1O60563 726 aaKnown RBP11.89□□□□□ -0.51
ZNF558-201ENST00000301475 SHBGP04278 402 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 GSTA1P08263 222 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 PCP11498 1178 aaKnown RBP11.89□□□□□ -0.51
ZNF558-201ENST00000301475 KIF5BP33176 963 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms