RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 TANGO6Q9C0B7 1094 aa21.04■□□□□ 0.96
TRA2A-201ENST00000297071 NRAPQ86VF7 1730 aa21.04■□□□□ 0.96
TRA2A-201ENST00000297071 KIF4AO95239 1232 aa21.04■□□□□ 0.96
TRA2A-201ENST00000297071 LDHBP07195 334 aaKnown RBP21.04■□□□□ 0.96
TRA2A-201ENST00000297071 MNAT1P51948 309 aa21.04■□□□□ 0.96
TRA2A-201ENST00000297071 KCTD16Q68DU8 428 aa21.04■□□□□ 0.96
TRA2A-201ENST00000297071 SNX29Q8TEQ0 813 aa21.04■□□□□ 0.96
TRA2A-201ENST00000297071 SEC14L1Q92503 715 aa21.04■□□□□ 0.96
TRA2A-201ENST00000297071 SLITRK6Q9H5Y7 841 aa21.04■□□□□ 0.96
TRA2A-201ENST00000297071 BMP2KQ9NSY1 1161 aaPredicted RBP21.04■□□□□ 0.96
TRA2A-201ENST00000297071 FBXL5Q9UKA1 691 aa21.04■□□□□ 0.96
TRA2A-201ENST00000297071 THRAP3Q9Y2W1 955 aaKnown RBP21.04■□□□□ 0.96
TRA2A-201ENST00000297071 GCOM1H8Y6P7 765 aaPredicted RBP21.03■□□□□ 0.96
TRA2A-201ENST00000297071 CHUKO15111 745 aa21.03■□□□□ 0.96
TRA2A-201ENST00000297071 MYZAPP0CAP1 466 aa21.03■□□□□ 0.96
TRA2A-201ENST00000297071 ZBTB48P10074 688 aaPredicted RBP21.03■□□□□ 0.96
TRA2A-201ENST00000297071 GCFC2P16383 781 aaKnown RBP21.03■□□□□ 0.96
TRA2A-201ENST00000297071 KLRK1P26718 216 aa21.03■□□□□ 0.96
TRA2A-201ENST00000297071 ECHS1P30084 290 aa21.03■□□□□ 0.96
TRA2A-201ENST00000297071 PRKCIP41743 596 aa21.03■□□□□ 0.96
TRA2A-201ENST00000297071 NPEPPSP55786 919 aa21.03■□□□□ 0.96
TRA2A-201ENST00000297071 POLR2FP61218 127 aaKnown RBP21.03■□□□□ 0.96
TRA2A-201ENST00000297071 GUCY1A3Q02108 690 aa21.03■□□□□ 0.96
TRA2A-201ENST00000297071 KLHL30Q0D2K2 578 aa21.03■□□□□ 0.96
TRA2A-201ENST00000297071 KIAA0753Q2KHM9 967 aa21.03■□□□□ 0.96
TRA2A-201ENST00000297071 DYMQ7RTS9 669 aa21.03■□□□□ 0.96
TRA2A-201ENST00000297071 RASGEF1CQ8N431 466 aa21.03■□□□□ 0.96
TRA2A-201ENST00000297071 SH3RF3Q8TEJ3 882 aaPredicted RBP21.03■□□□□ 0.96
TRA2A-201ENST00000297071 HINFPQ9BQA5 517 aa21.03■□□□□ 0.96
TRA2A-201ENST00000297071 SLC12A6Q9UHW9 1150 aa21.03■□□□□ 0.96
TRA2A-201ENST00000297071 NENFQ9UMX5 172 aa21.03■□□□□ 0.96
TRA2A-201ENST00000297071 STX8Q9UNK0 236 aa21.03■□□□□ 0.96
TRA2A-201ENST00000297071 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.03■□□□□ 0.96
TRA2A-201ENST00000297071 A0A087X0T9 212 aa21.02■□□□□ 0.96
TRA2A-201ENST00000297071 TRAF5O00463 557 aa21.02■□□□□ 0.96
TRA2A-201ENST00000297071 RASSF9O75901 435 aa21.02■□□□□ 0.96
TRA2A-201ENST00000297071 FAM228BP0C875 321 aa21.02■□□□□ 0.96
TRA2A-201ENST00000297071 ADCY7P51828 1080 aa21.02■□□□□ 0.96
TRA2A-201ENST00000297071 SKIDA1Q1XH10 827 aa21.02■□□□□ 0.96
TRA2A-201ENST00000297071 CEP85LQ5SZL2 805 aa21.02■□□□□ 0.96
TRA2A-201ENST00000297071 TTC19Q6DKK2 380 aaPredicted RBP21.02■□□□□ 0.96
TRA2A-201ENST00000297071 CCDC50Q8IVM0 306 aa21.02■□□□□ 0.96
TRA2A-201ENST00000297071 CCDC65Q8IXS2 484 aa21.02■□□□□ 0.96
TRA2A-201ENST00000297071 MAGEC3Q8TD91 643 aa21.02■□□□□ 0.96
TRA2A-201ENST00000297071 LMBR1Q8WVP7 490 aa21.02■□□□□ 0.96
TRA2A-201ENST00000297071 NLRC4Q9NPP4 1024 aa21.02■□□□□ 0.96
TRA2A-201ENST00000297071 PCDHA2Q9Y5H9 948 aa21.02■□□□□ 0.96
TRA2A-201ENST00000297071 GMNCA6NCL1 334 aa21.01■□□□□ 0.95
TRA2A-201ENST00000297071 H0YHG0 523 aa21.01■□□□□ 0.95
TRA2A-201ENST00000297071 EDIL3O43854 480 aa21.01■□□□□ 0.95
TRA2A-201ENST00000297071 GFPT2O94808 682 aa21.01■□□□□ 0.95
TRA2A-201ENST00000297071 FTCDO95954 541 aa21.01■□□□□ 0.95
TRA2A-201ENST00000297071 HSD17B3P37058 310 aa21.01■□□□□ 0.95
TRA2A-201ENST00000297071 MRPS25P82663 173 aaKnown RBP21.01■□□□□ 0.95
TRA2A-201ENST00000297071 ZNF772Q68DY9 489 aaPredicted RBP21.01■□□□□ 0.95
TRA2A-201ENST00000297071 C15orf52Q6ZUT6 534 aaKnown RBP21.01■□□□□ 0.95
TRA2A-201ENST00000297071 SLFN11Q7Z7L1 901 aa21.01■□□□□ 0.95
TRA2A-201ENST00000297071 LRRC57Q8N9N7 239 aa21.01■□□□□ 0.95
TRA2A-201ENST00000297071 PANK4Q9NVE7 773 aa21.01■□□□□ 0.95
TRA2A-201ENST00000297071 TTC7AQ9ULT0 858 aaPredicted RBP21.01■□□□□ 0.95
TRA2A-201ENST00000297071 PITPNM2Q9BZ72 1349 aa21.01■□□□□ 0.95
TRA2A-201ENST00000297071 GUCY2FP51841 1108 aa21.01■□□□□ 0.95
TRA2A-201ENST00000297071 ERVK-9P63128 1117 aa21.01■□□□□ 0.95
TRA2A-201ENST00000297071 ASPRV1Q53RT3 343 aa21.01■□□□□ 0.95
TRA2A-201ENST00000297071 NLRP3Q96P20 1036 aa21.01■□□□□ 0.95
TRA2A-201ENST00000297071 EYA3Q99504 573 aa21.01■□□□□ 0.95
TRA2A-201ENST00000297071 GOLGA6L7A0A1B0GV03 622 aa21■□□□□ 0.95
TRA2A-201ENST00000297071 FRMD3A2A2Y4 597 aa21■□□□□ 0.95
TRA2A-201ENST00000297071 ZSCAN5CA6NGD5 496 aaPredicted RBP21■□□□□ 0.95
TRA2A-201ENST00000297071 PGRMC1O00264 195 aaKnown RBP21■□□□□ 0.95
TRA2A-201ENST00000297071 TRAPPC3O43617 180 aa21■□□□□ 0.95
TRA2A-201ENST00000297071 CDK8P49336 464 aa21■□□□□ 0.95
TRA2A-201ENST00000297071 PPP2R5EQ16537 467 aa21■□□□□ 0.95
TRA2A-201ENST00000297071 LACTB2Q53H82 288 aaPredicted RBP21■□□□□ 0.95
TRA2A-201ENST00000297071 MAATS1Q7Z4T9 603 aa21■□□□□ 0.95
TRA2A-201ENST00000297071 FRMD5Q7Z6J6 570 aa21■□□□□ 0.95
TRA2A-201ENST00000297071 CENPTQ96BT3 561 aa21■□□□□ 0.95
TRA2A-201ENST00000297071 CYFIP2Q96F07 1278 aa21■□□□□ 0.95
TRA2A-201ENST00000297071 BUD13Q9BRD0 619 aaKnown RBP eCLIP21■□□□□ 0.952e-9■■■□□ 15
TRA2A-201ENST00000297071 KCTD10Q9H3F6 313 aa21■□□□□ 0.95
TRA2A-201ENST00000297071 TFCP2L1Q9NZI6 479 aa21■□□□□ 0.95
TRA2A-201ENST00000297071 BIN2Q9UBW5 565 aaPredicted RBP21■□□□□ 0.95
TRA2A-201ENST00000297071 DIS3Q9Y2L1 958 aaKnown RBP21■□□□□ 0.95
TRA2A-201ENST00000297071 TMCO5BA8MYB1 307 aa20.99■□□□□ 0.95
TRA2A-201ENST00000297071 SLC37A4O43826 429 aa20.99■□□□□ 0.95
TRA2A-201ENST00000297071 DPY19L2P1Q6NXN4 242 aa20.99■□□□□ 0.95
TRA2A-201ENST00000297071 IRF2BP2Q7Z5L9 587 aa20.99■□□□□ 0.95
TRA2A-201ENST00000297071 PIGSQ96S52 555 aa20.99■□□□□ 0.95
TRA2A-201ENST00000297071 SUCLA2Q9P2R7 463 aaPredicted RBP20.99■□□□□ 0.95
TRA2A-201ENST00000297071 SWAP70Q9UH65 585 aa20.99■□□□□ 0.95
TRA2A-201ENST00000297071 LEMD3Q9Y2U8 911 aa20.99■□□□□ 0.95
TRA2A-201ENST00000297071 ESYT3A0FGR9 886 aa20.99■□□□□ 0.95
TRA2A-201ENST00000297071 TULP1O00294 542 aaPredicted RBP20.99■□□□□ 0.95
TRA2A-201ENST00000297071 GOLGA8HP0CJ92 632 aa20.99■□□□□ 0.95
TRA2A-201ENST00000297071 PLCG2P16885 1265 aa20.99■□□□□ 0.95
TRA2A-201ENST00000297071 CLK2P49760 499 aaKnown RBP20.99■□□□□ 0.95
TRA2A-201ENST00000297071 EIF3BP55884 814 aaKnown RBP20.99■□□□□ 0.95
TRA2A-201ENST00000297071 HDLBPQ00341 1268 aaKnown RBP20.99■□□□□ 0.95
TRA2A-201ENST00000297071 RAPGEF1Q13905 1077 aa20.99■□□□□ 0.95
TRA2A-201ENST00000297071 UAP1Q16222 522 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms