RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 DHX38Q92620 1227 aaKnown RBP13.38□□□□□ -0.27
SLX4-201ENST00000294008 TMEM87BQ96K49 555 aa13.38□□□□□ -0.27
SLX4-201ENST00000294008 ZNF668Q96K58 619 aaPredicted RBP13.38□□□□□ -0.27
SLX4-201ENST00000294008 SMYD3Q9H7B4 428 aa13.38□□□□□ -0.27
SLX4-201ENST00000294008 ANGEL1Q9UNK9 670 aaKnown RBP13.38□□□□□ -0.27
SLX4-201ENST00000294008 CCDC141Q6ZP82 1450 aa13.38□□□□□ -0.27
SLX4-201ENST00000294008 SKAP2O75563 359 aaPredicted RBP13.37□□□□□ -0.27
SLX4-201ENST00000294008 HSPA4LO95757 839 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 CAPN1P07384 714 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 SLC16A1P53985 500 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 SYTL3Q4VX76 610 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 PPP6R3Q5H9R7 873 aaPredicted RBP13.37□□□□□ -0.27
SLX4-201ENST00000294008 OR9Q1Q8NGQ5 310 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 BCL2L14Q9BZR8 327 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 PSDA5PKW4 1024 aaPredicted RBP13.37□□□□□ -0.27
SLX4-201ENST00000294008 SLCO1A2P46721 670 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 POLE2P56282 527 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 IL9RQ01113 521 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 SLC10A5Q5PT55 438 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 NT5C1BQ96P26 610 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 UPF3AQ9H1J1 476 aaKnown RBP13.37□□□□□ -0.27
SLX4-201ENST00000294008 GINM1Q9NU53 330 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 DONSONQ9NYP3 566 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 MEIS1O00470 390 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 RASGRF2O14827 1237 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 ALDH1L1O75891 902 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 ATP8B2P98198 1209 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 KRT72Q14CN4 511 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 PARP10Q53GL7 1025 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 DNAJC24Q6P3W2 148 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 TMTC1Q8IUR5 882 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 CENPKQ9BS16 269 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 COPG1Q9Y678 874 aaKnown RBP13.37□□□□□ -0.27
SLX4-201ENST00000294008 FPGT-TNNI3KV9GXZ4 949 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 CCDC195A0A1B0GUA6 201 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 GTF2H3Q13889 308 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 SDR42E1Q8WUS8 393 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 SCG3Q8WXD2 468 aaKnown RBP13.37□□□□□ -0.27
SLX4-201ENST00000294008 OPTNQ96CV9 577 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 LZTS2Q9BRK4 669 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 DBNDD1Q9H9R9 158 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 MAP3K15Q6ZN16 1313 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 MT-ND3P03897 115 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 SUPT20HL1Q3ZLR7 823 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 CCDC92Q53HC0 331 aaPredicted RBP13.37□□□□□ -0.27
SLX4-201ENST00000294008 CATSPER4Q7RTX7 472 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 ADD3Q9UEY8 706 aaKnown RBP13.37□□□□□ -0.27
SLX4-201ENST00000294008 LRRD1A4D1F6 860 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 MED7O43513 233 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 MYO1DO94832 1006 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 BTDP43251 543 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 C10orf76Q5T2E6 689 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 GRAMD4Q6IC98 578 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 NANOGNBQ7Z5D8 188 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 NBPF15Q8N660 670 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 USE1Q9NZ43 259 aa13.37□□□□□ -0.27
SLX4-201ENST00000294008 A1BGP04217 495 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 SLFN13Q68D06 897 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 MMS22LQ6ZRQ5 1243 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 LRRC37BQ96QE4 947 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 SERTAD1Q9UHV2 236 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 CAB39Q9Y376 341 aaPredicted RBP13.36□□□□□ -0.27
SLX4-201ENST00000294008 NFE2L3Q9Y4A8 694 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 VGLL3A8MV65 326 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 KCNJ18B7U540 433 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 TRIM37O94972 964 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 KCNJ6P48051 423 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 KCNJ12Q14500 433 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 MAGOHBQ96A72 148 aaKnown RBP13.36□□□□□ -0.27
SLX4-201ENST00000294008 PPP1R36Q96LQ0 422 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 SEL1LQ9UBV2 794 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 ZNF202O95125 648 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 PAPOLAP51003 745 aaKnown RBP13.36□□□□□ -0.27
SLX4-201ENST00000294008 NME3Q13232 169 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 SGO2Q562F6 1265 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 BMP2KLQ5H9B9 411 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 CEP85Q6P2H3 762 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 PCDHA5Q9Y5H7 936 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 TROQ12816 1431 aaPredicted RBP13.36□□□□□ -0.27
SLX4-201ENST00000294008 SBNO1A3KN83 1393 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 IREB2P48200 963 aaKnown RBP13.36□□□□□ -0.27
SLX4-201ENST00000294008 TSPY1Q01534 308 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 IQCDQ96DY2 449 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 ASPSCR1Q9BZE9 553 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 DDX28Q9NUL7 540 aaKnown RBP13.36□□□□□ -0.27
SLX4-201ENST00000294008 ABCC11Q96J66 1382 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 CUTAO60888 179 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 ZNF394Q53GI3 561 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 RAET1EQ8TD07 263 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 SP110Q9HB58 689 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 KLHL8Q9P2G9 620 aaPredicted RBP13.36□□□□□ -0.27
SLX4-201ENST00000294008 EFCAB8A8MWE9 144 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 SOX11P35716 441 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 CSE1LP55060 971 aaKnown RBP13.36□□□□□ -0.27
SLX4-201ENST00000294008 FAM173BQ6P4H8 233 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 ANKRD13CQ8N6S4 541 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 CUX1P39880 1505 aa13.36□□□□□ -0.27
SLX4-201ENST00000294008 TUBBP07437 444 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 KLHL24Q6TFL4 600 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 KIFC3Q9BVG8 833 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms