RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 ZNF804AQ7Z570 1209 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 RNPC3Q96LT9 517 aaKnown RBP11.41□□□□□ -0.58
SKA1-201ENST00000285116 SETDB2Q96T68 719 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 HINFPQ9BQA5 517 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 SLC39A2Q9NP94 309 aa11.41□□□□□ -0.58
SKA1-201ENST00000285116 GAKO14976 1311 aa11.4□□□□□ -0.58
SKA1-201ENST00000285116 MYBP10242 640 aa11.4□□□□□ -0.58
SKA1-201ENST00000285116 CLK2P49760 499 aaKnown RBP11.4□□□□□ -0.58
SKA1-201ENST00000285116 CDR1P51861 262 aa11.4□□□□□ -0.58
SKA1-201ENST00000285116 KCNMA1Q12791 1236 aa11.4□□□□□ -0.58
SKA1-201ENST00000285116 PTGISQ16647 500 aa11.4□□□□□ -0.58
SKA1-201ENST00000285116 CFAP58Q5T655 872 aa11.4□□□□□ -0.58
SKA1-201ENST00000285116 RNF187Q5TA31 235 aaPredicted RBP11.4□□□□□ -0.58
SKA1-201ENST00000285116 IFT20Q8IY31 132 aa11.4□□□□□ -0.58
SKA1-201ENST00000285116 SH2D3CQ8N5H7 860 aa11.4□□□□□ -0.58
SKA1-201ENST00000285116 COL4A3BPQ9Y5P4 624 aa11.4□□□□□ -0.58
SKA1-201ENST00000285116 IGKV6D-41A0A0C4DH26 115 aa11.4□□□□□ -0.58
SKA1-201ENST00000285116 NKRFO15226 690 aaKnown RBP eCLIP11.4□□□□□ -0.58
SKA1-201ENST00000285116 ZPR1O75312 459 aa11.4□□□□□ -0.58
SKA1-201ENST00000285116 MYCNP04198 464 aaPredicted RBP11.4□□□□□ -0.58
SKA1-201ENST00000285116 GCFC2P16383 781 aaKnown RBP11.4□□□□□ -0.58
SKA1-201ENST00000285116 FKBP3Q00688 224 aaKnown RBP11.4□□□□□ -0.58
SKA1-201ENST00000285116 SLC7A5Q01650 507 aa11.4□□□□□ -0.58
SKA1-201ENST00000285116 CCDC181Q5TID7 509 aa11.4□□□□□ -0.58
SKA1-201ENST00000285116 RRAGAQ7L523 313 aa11.4□□□□□ -0.58
SKA1-201ENST00000285116 IQCKQ8N0W5 287 aa11.4□□□□□ -0.58
SKA1-201ENST00000285116 DNAJC19Q96DA6 116 aa11.4□□□□□ -0.58
SKA1-201ENST00000285116 AIPL1Q9NZN9 384 aa11.4□□□□□ -0.58
SKA1-201ENST00000285116 ATF5Q9Y2D1 282 aaPredicted RBP11.4□□□□□ -0.58
SKA1-201ENST00000285116 KDM3AQ9Y4C1 1321 aa11.4□□□□□ -0.59
SKA1-201ENST00000285116 NOL4O94818 638 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 ZBTB7AO95365 584 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 ADCY7P51828 1080 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 SLC9C1Q4G0N8 1177 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 CEP85LQ5SZL2 805 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 KCTD16Q68DU8 428 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 C8orf74Q6P047 294 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 NFRKBQ6P4R8 1299 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 NLRP14Q86W24 1093 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 NBPF5PQ86XG9 351 aaPredicted RBP11.39□□□□□ -0.59
SKA1-201ENST00000285116 CCDC50Q8IVM0 306 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 CCDC13Q8IYE1 715 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 MYOCDQ8IZQ8 938 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 ACTR5Q9H9F9 607 aaPredicted RBP11.39□□□□□ -0.59
SKA1-201ENST00000285116 VEZTQ9HBM0 779 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 FAM207AQ9NSI2 230 aaPredicted RBP11.39□□□□□ -0.59
SKA1-201ENST00000285116 SWAP70Q9UH65 585 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 STX8Q9UNK0 236 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 ATP6V0A2Q9Y487 856 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 KRT14P02533 472 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 IL1R1P14778 569 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 NR1D1P20393 614 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 PAK2Q13177 524 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 GRAPQ13588 217 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 MEI1Q5TIA1 1274 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 KRT79Q5XKE5 535 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 TRIM59Q8IWR1 403 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 MYCBPAPQ8TBZ2 947 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 GRAPLQ8TC17 118 aaPredicted RBP11.39□□□□□ -0.59
SKA1-201ENST00000285116 SMCR8Q8TEV9 937 aaPredicted RBP11.39□□□□□ -0.59
SKA1-201ENST00000285116 TGFBRAP1Q8WUH2 860 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 MTMR8Q96EF0 704 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 CCT8L2Q96SF2 557 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 SALL4Q9UJQ4 1053 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 TMEM59LQ9UK28 342 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 PCDHA2Q9Y5H9 948 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 GOLGA6L7A0A1B0GV03 622 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 FRMD3A2A2Y4 597 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 FAM107AO95990 144 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 MDH1P40925 334 aaKnown RBP11.39□□□□□ -0.59
SKA1-201ENST00000285116 MATR3P43243 847 aaKnown RBP eCLIP11.39□□□□□ -0.595e-6■■□□□ 12.5
SKA1-201ENST00000285116 GUCY1A3Q02108 690 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 SLC18A3Q16572 532 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 EDRF1Q3B7T1 1238 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 SFMBT2Q5VUG0 894 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 SLF2Q8IX21 1173 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 SLC44A5Q8NCS7 719 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 WHAMMQ8TF30 809 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 DDX12PQ92771 950 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 MIEF2Q96C03 454 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 CDK5RAP3Q96JB5 506 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 INPP4AQ96PE3 977 aaPredicted RBP11.39□□□□□ -0.59
SKA1-201ENST00000285116 PIGSQ96S52 555 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 NT5C3AQ9H0P0 336 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 MMRN2Q9H8L6 949 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 ODF2LQ9ULJ1 636 aa11.39□□□□□ -0.59
SKA1-201ENST00000285116 RTCBQ9Y3I0 505 aaKnown RBP11.39□□□□□ -0.59
SKA1-201ENST00000285116 PDHBP11177 359 aa11.38□□□□□ -0.59
SKA1-201ENST00000285116 COASYQ13057 564 aa11.38□□□□□ -0.59
SKA1-201ENST00000285116 IFNLR1Q8IU57 520 aaPredicted RBP11.38□□□□□ -0.59
SKA1-201ENST00000285116 N4BP2L2Q92802 583 aaPredicted RBP11.38□□□□□ -0.59
SKA1-201ENST00000285116 CCDC43Q96MW1 224 aaKnown RBP11.38□□□□□ -0.59
SKA1-201ENST00000285116 SLC40A1Q9NP59 571 aa11.38□□□□□ -0.59
SKA1-201ENST00000285116 ZNF233A6NK53 670 aa11.38□□□□□ -0.59
SKA1-201ENST00000285116 HMGB1P1B2RPK0 211 aaPredicted RBP11.38□□□□□ -0.59
SKA1-201ENST00000285116 SLC37A4O43826 429 aa11.38□□□□□ -0.59
SKA1-201ENST00000285116 TLR2O60603 784 aa11.38□□□□□ -0.59
SKA1-201ENST00000285116 GOLGA8HP0CJ92 632 aa11.38□□□□□ -0.59
SKA1-201ENST00000285116 TXKP42681 527 aa11.38□□□□□ -0.59
SKA1-201ENST00000285116 SLC1A4P43007 532 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms