RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 RETREG2Q8NC44 543 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 hCG_1984214I3L0E3 225 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 CALUO43852 315 aaPredicted RBP13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 WDR59Q6PJI9 974 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 CATSPER3Q86XQ3 398 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 ZNF713Q8N859 430 aaPredicted RBP13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 GLT8D2Q9H1C3 349 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 GOPCQ9HD26 462 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 CAPN6Q9Y6Q1 641 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 SPATA31A6Q5VVP1 1343 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 GFPT2O94808 682 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 SLC9A1P19634 815 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 SSR1P43307 286 aaKnown RBP13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 ZC2HC1CQ53FD0 456 aaPredicted RBP13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 ODF2Q5BJF6 829 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 HAS1Q92839 578 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 NAP1L4Q99733 375 aaKnown RBP13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 ZNF577Q9BSK1 485 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 IKZF4Q9H2S9 585 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 CCPG1Q9ULG6 757 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 DUOX1Q9NRD9 1551 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 GAKO14976 1311 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 TESPA1A2RU30 521 aaPredicted RBP13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 LRRC10BA6NIK2 292 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 PDIA5Q14554 519 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 HHIPL2Q6UWX4 724 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 REEP2Q9BRK0 252 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 TMEM39BQ9GZU3 492 aa13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 REXO2Q9Y3B8 237 aaKnown RBP13.04□□□□□ -0.32
SLC13A3-201ENST00000279027 ANKRD65E5RJM6 399 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 FXR2P51116 673 aaKnown RBP eCLIP13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 SF3A3Q12874 501 aaKnown RBP eCLIP13.03□□□□□ -0.322e-7■□□□□ 10.9
SLC13A3-201ENST00000279027 GJB7Q6PEY0 223 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 CCDC170Q8IYT3 715 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 COG1Q8WTW3 980 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 BCAS3Q9H6U6 928 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 EHMT1Q9H9B1 1298 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 ARHGAP20Q9P2F6 1191 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 MYO1AQ9UBC5 1043 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 FRMD4BQ9Y2L6 1034 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 STRCQ7RTU9 1775 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 JDP2Q8WYK2 163 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 CCDC127Q96BQ5 260 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 FAM163AQ96GL9 167 aaPredicted RBP13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 MTMR9Q96QG7 549 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 PODXL2Q9NZ53 605 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 PRR12Q9ULL5 1215 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 ABCB11O95342 1321 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 KRT13P13646 458 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 EIF2AK2P19525 551 aaKnown RBP13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 MCM3P25205 808 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 HOXA10P31260 410 aaPredicted RBP13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 EZH2Q15910 746 aaKnown RBP13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 WDR78Q5VTH9 848 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 CERKQ8TCT0 537 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 KRT12Q99456 494 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 KCND1Q9NSA2 647 aa13.03□□□□□ -0.32
SLC13A3-201ENST00000279027 ESYT2A0FGR8 921 aa13.02□□□□□ -0.32
SLC13A3-201ENST00000279027 PALMO75781 387 aa13.02□□□□□ -0.32
SLC13A3-201ENST00000279027 TRIM49P0CI25 452 aa13.02□□□□□ -0.32
SLC13A3-201ENST00000279027 TRIM49CP0CI26 452 aa13.02□□□□□ -0.32
SLC13A3-201ENST00000279027 TUBB2AQ13885 445 aa13.02□□□□□ -0.32
SLC13A3-201ENST00000279027 KCTD16Q68DU8 428 aa13.02□□□□□ -0.32
SLC13A3-201ENST00000279027 BICD1Q96G01 975 aa13.02□□□□□ -0.32
SLC13A3-201ENST00000279027 TUBB2BQ9BVA1 445 aa13.02□□□□□ -0.32
SLC13A3-201ENST00000279027 EIF3CLB5ME19 914 aaKnown RBP13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 ZEB2O60315 1214 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 CYP11B2P19099 503 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 STRIP1Q5VSL9 837 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 PRAMEF18Q5VWM3 479 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 CENPPQ6IPU0 288 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 MIER3Q7Z3K6 550 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 CHURC1Q8WUH1 139 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 DCAF4Q8WV16 495 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 EIF3CQ99613 913 aaKnown RBP13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 EIF2AK1Q9BQI3 630 aaKnown RBP13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 ANKZF1Q9H8Y5 726 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 FAM198AQ9UFP1 575 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 MYH6P13533 1939 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 GOLGA8IPA6NC78 632 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 GOLGA8JA6NMD2 632 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 FLOT1O75955 427 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 HARSP12081 509 aaKnown RBP13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 GUCY2DQ02846 1103 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 PROM2Q8N271 834 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 ZNF507Q8TCN5 953 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 DNAJC7Q99615 494 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 ZNF341Q9BYN7 854 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 CWC15Q9P013 229 aaKnown RBP13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 GCNT4Q9P109 453 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 PHLPP1O60346 1717 aa13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 XIRP1Q702N8 1843 aaKnown RBP13.02□□□□□ -0.33
SLC13A3-201ENST00000279027 SRCAPQ6ZRS2 3230 aa13.01□□□□□ -0.33
SLC13A3-201ENST00000279027 K7ENM7 598 aa13.01□□□□□ -0.33
SLC13A3-201ENST00000279027 M0R2N6 131 aa13.01□□□□□ -0.33
SLC13A3-201ENST00000279027 CASP4P49662 377 aa13.01□□□□□ -0.33
SLC13A3-201ENST00000279027 KCNA1Q09470 495 aa13.01□□□□□ -0.33
SLC13A3-201ENST00000279027 RSRC2Q7L4I2 434 aaKnown RBP13.01□□□□□ -0.33
SLC13A3-201ENST00000279027 SMIM23A6NLE4 172 aa13.01□□□□□ -0.33
SLC13A3-201ENST00000279027 FAM86B1E9PN63 330 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms