RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 CREBRFQ8IUR6 639 aa13.09□□□□□ -0.31
SSRP1-201ENST00000278412 NSUN6Q8TEA1 469 aaKnown RBP13.09□□□□□ -0.31
SSRP1-201ENST00000278412 PDCL3Q9H2J4 239 aa13.09□□□□□ -0.31
SSRP1-201ENST00000278412 MYPNQ86TC9 1320 aa13.09□□□□□ -0.31
SSRP1-201ENST00000278412 ZNF157P51786 506 aaPredicted RBP13.08□□□□□ -0.31
SSRP1-201ENST00000278412 CASP5P51878 434 aa13.08□□□□□ -0.31
SSRP1-201ENST00000278412 MYL5Q02045 173 aa13.08□□□□□ -0.31
SSRP1-201ENST00000278412 GOLGA8FQ08AF8 430 aa13.08□□□□□ -0.31
SSRP1-201ENST00000278412 GOLGA8DPQ0D2H9 430 aa13.08□□□□□ -0.31
SSRP1-201ENST00000278412 PPP2R5CQ13362 524 aa13.08□□□□□ -0.31
SSRP1-201ENST00000278412 GJC2Q5T442 439 aaPredicted RBP13.08□□□□□ -0.31
SSRP1-201ENST00000278412 FASTKD5Q7L8L6 764 aaKnown RBP13.08□□□□□ -0.31
SSRP1-201ENST00000278412 C7orf25Q9BPX7 421 aa13.08□□□□□ -0.31
SSRP1-201ENST00000278412 LXNQ9BS40 222 aa13.08□□□□□ -0.31
SSRP1-201ENST00000278412 XPO4Q9C0E2 1151 aaKnown RBP13.08□□□□□ -0.31
SSRP1-201ENST00000278412 INTS13Q9NVM9 706 aa13.08□□□□□ -0.31
SSRP1-201ENST00000278412 FDX1P10109 184 aa13.08□□□□□ -0.32
SSRP1-201ENST00000278412 ALDH5A1P51649 535 aaPredicted RBP13.08□□□□□ -0.32
SSRP1-201ENST00000278412 HYIQ5T013 277 aa13.08□□□□□ -0.32
SSRP1-201ENST00000278412 SAPCD2Q86UD0 394 aa13.08□□□□□ -0.32
SSRP1-201ENST00000278412 NAP1L4Q99733 375 aaKnown RBP13.08□□□□□ -0.32
SSRP1-201ENST00000278412 TEKT3Q9BXF9 490 aa13.08□□□□□ -0.32
SSRP1-201ENST00000278412 CPA4Q9UI42 421 aa13.08□□□□□ -0.32
SSRP1-201ENST00000278412 ARIH2O95376 493 aa13.08□□□□□ -0.32
SSRP1-201ENST00000278412 PLA2G4FQ68DD2 849 aa13.08□□□□□ -0.32
SSRP1-201ENST00000278412 MCTP2Q6DN12 878 aa13.08□□□□□ -0.32
SSRP1-201ENST00000278412 KSR1Q8IVT5 923 aa13.08□□□□□ -0.32
SSRP1-201ENST00000278412 NELFBQ8WX92 580 aa13.08□□□□□ -0.32
SSRP1-201ENST00000278412 NAT10Q9H0A0 1025 aaKnown RBP13.08□□□□□ -0.32
SSRP1-201ENST00000278412 EHMT1Q9H9B1 1298 aa13.08□□□□□ -0.32
SSRP1-201ENST00000278412 SYNRGQ9UMZ2 1314 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 POTEB2H3BUK9 544 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 KCNA2P16389 499 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 CCND2P30279 289 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 SOX10P56693 466 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 ZNF658Q5TYW1 1059 aaPredicted RBP13.07□□□□□ -0.32
SSRP1-201ENST00000278412 RASAL3Q86YV0 1011 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 C17orf53Q8N3J3 647 aaPredicted RBP13.07□□□□□ -0.32
SSRP1-201ENST00000278412 MLKLQ8NB16 471 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 ANP32BQ92688 251 aaKnown RBP13.07□□□□□ -0.32
SSRP1-201ENST00000278412 INPP4AQ96PE3 977 aaPredicted RBP13.07□□□□□ -0.32
SSRP1-201ENST00000278412 REEP2Q9BRK0 252 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 PDGFCQ9NRA1 345 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 WDR81Q562E7 1941 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 RHOBTB3O94955 611 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 CETPP11597 493 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 OSBPP22059 807 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 KCNA1Q09470 495 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 MIER3Q7Z3K6 550 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 FBXO16Q8IX29 292 aaPredicted RBP13.07□□□□□ -0.32
SSRP1-201ENST00000278412 FAM133AQ8N9E0 248 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 CHST13Q8NET6 341 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 COPS5Q92905 334 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 BPIFA3Q9BQP9 254 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.07□□□□□ -0.32
SSRP1-201ENST00000278412 STK17AQ9UEE5 414 aa13.07□□□□□ -0.32
SSRP1-201ENST00000278412 A0A0U1RQG5 324 aaPredicted RBP13.06□□□□□ -0.32
SSRP1-201ENST00000278412 KIF3CO14782 793 aa13.06□□□□□ -0.32
SSRP1-201ENST00000278412 GTF2A2P52657 109 aa13.06□□□□□ -0.32
SSRP1-201ENST00000278412 NPEPPSP55786 919 aa13.06□□□□□ -0.32
SSRP1-201ENST00000278412 FANCCQ00597 558 aa13.06□□□□□ -0.32
SSRP1-201ENST00000278412 SETQ01105 290 aaPredicted RBP13.06□□□□□ -0.32
SSRP1-201ENST00000278412 COASYQ13057 564 aa13.06□□□□□ -0.32
SSRP1-201ENST00000278412 LY6KQ17RY6 165 aa13.06□□□□□ -0.32
SSRP1-201ENST00000278412 CYFIP1Q7L576 1253 aa13.06□□□□□ -0.32
SSRP1-201ENST00000278412 ADSSL1Q8N142 457 aa13.06□□□□□ -0.32
SSRP1-201ENST00000278412 GIMAP8Q8ND71 665 aaPredicted RBP13.06□□□□□ -0.32
SSRP1-201ENST00000278412 EXOC1Q9NV70 894 aa13.06□□□□□ -0.32
SSRP1-201ENST00000278412 TRPM7Q96QT4 1865 aa13.06□□□□□ -0.32
SSRP1-201ENST00000278412 LRMPQ12912 555 aa13.06□□□□□ -0.32
SSRP1-201ENST00000278412 NELFCDQ8IXH7 590 aa13.06□□□□□ -0.32
SSRP1-201ENST00000278412 MB21D1Q8N884 522 aa13.06□□□□□ -0.32
SSRP1-201ENST00000278412 TRIML1Q8N9V2 468 aa13.06□□□□□ -0.32
SSRP1-201ENST00000278412 GPBP1L1Q9HC44 474 aaPredicted RBP13.06□□□□□ -0.32
SSRP1-201ENST00000278412 RABGAP1Q9Y3P9 1069 aa13.06□□□□□ -0.32
SSRP1-201ENST00000278412 TPM2P07951 284 aa13.05□□□□□ -0.32
SSRP1-201ENST00000278412 BCRP11274 1271 aa13.05□□□□□ -0.32
SSRP1-201ENST00000278412 GIT2Q14161 759 aa13.05□□□□□ -0.32
SSRP1-201ENST00000278412 HAUS3Q68CZ6 603 aa13.05□□□□□ -0.32
SSRP1-201ENST00000278412 MMP19Q99542 508 aa13.05□□□□□ -0.32
SSRP1-201ENST00000278412 SEMA6BQ9H3T3 888 aa13.05□□□□□ -0.32
SSRP1-201ENST00000278412 DNM3Q9UQ16 869 aa13.05□□□□□ -0.32
SSRP1-201ENST00000278412 ZNF862O60290 1169 aa13.05□□□□□ -0.32
SSRP1-201ENST00000278412 ZNF18P17022 549 aa13.05□□□□□ -0.32
SSRP1-201ENST00000278412 ANKRD40Q6AI12 368 aa13.05□□□□□ -0.32
SSRP1-201ENST00000278412 IRF2BP1Q8IU81 584 aa13.05□□□□□ -0.32
SSRP1-201ENST00000278412 KCNF1Q9H3M0 494 aa13.05□□□□□ -0.32
SSRP1-201ENST00000278412 GPRC5CQ9NQ84 441 aa13.05□□□□□ -0.32
SSRP1-201ENST00000278412 PANK4Q9NVE7 773 aa13.05□□□□□ -0.32
SSRP1-201ENST00000278412 IKBKBO14920 756 aa13.04□□□□□ -0.32
SSRP1-201ENST00000278412 TEX33O43247 280 aa13.04□□□□□ -0.32
SSRP1-201ENST00000278412 PTMAP06454 111 aaKnown RBP13.04□□□□□ -0.32
SSRP1-201ENST00000278412 HTRA3P83110 453 aa13.04□□□□□ -0.32
SSRP1-201ENST00000278412 EHHADHQ08426 723 aa13.04□□□□□ -0.32
SSRP1-201ENST00000278412 RINT1Q6NUQ1 792 aa13.04□□□□□ -0.32
SSRP1-201ENST00000278412 APTXQ7Z2E3 356 aaKnown RBP13.04□□□□□ -0.32
SSRP1-201ENST00000278412 FILIP1Q7Z7B0 1213 aa13.04□□□□□ -0.32
SSRP1-201ENST00000278412 SFR1Q86XK3 245 aa13.04□□□□□ -0.32
SSRP1-201ENST00000278412 CCDC60Q8IWA6 550 aaPredicted RBP13.04□□□□□ -0.32
SSRP1-201ENST00000278412 DRC7Q8IY82 874 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms