RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 CCDC91Q7Z6B0 441 aa11.44□□□□□ -0.58
UPF3B-201ENST00000276201 IRF2BP1Q8IU81 584 aa11.44□□□□□ -0.58
UPF3B-201ENST00000276201 ADSSL1Q8N142 457 aa11.44□□□□□ -0.58
UPF3B-201ENST00000276201 CCDC155Q8N6L0 562 aa11.44□□□□□ -0.58
UPF3B-201ENST00000276201 JAKMIP2Q96AA8 810 aa11.44□□□□□ -0.58
UPF3B-201ENST00000276201 CHP1Q99653 195 aa11.44□□□□□ -0.58
UPF3B-201ENST00000276201 GOLGA6AQ9NYA3 693 aa11.44□□□□□ -0.58
UPF3B-201ENST00000276201 GUCA1BQ9UMX6 200 aa11.44□□□□□ -0.58
UPF3B-201ENST00000276201 TTC26A0AVF1 554 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 GOLGA6BA6NDN3 693 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 GPR25O00155 361 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 PDHXO00330 501 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 MPHOSPH10O00566 681 aaKnown RBP11.43□□□□□ -0.58
UPF3B-201ENST00000276201 PARP1P09874 1014 aaKnown RBP11.43□□□□□ -0.58
UPF3B-201ENST00000276201 CCT6AP40227 531 aaKnown RBP11.43□□□□□ -0.58
UPF3B-201ENST00000276201 PPP1R2P41236 205 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 MTMR2Q13614 643 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 SH3D19Q5HYK7 790 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 TTC38Q5R3I4 469 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 CCDC122Q5T0U0 273 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 B4GALNT4Q76KP1 1039 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 YTHDF3Q7Z739 585 aaKnown RBP11.43□□□□□ -0.58
UPF3B-201ENST00000276201 CNPY4Q8N129 248 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 PLCD3Q8N3E9 789 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 SHISA4Q96DD7 197 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 VPS16Q9H269 839 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 ZNHIT6Q9NWK9 470 aaKnown RBP11.43□□□□□ -0.58
UPF3B-201ENST00000276201 TAB2Q9NYJ8 693 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 GRIN2DO15399 1336 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 PHACTR2O75167 634 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 ERLIN2O94905 339 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 TFRCP02786 760 aaKnown RBP11.43□□□□□ -0.58
UPF3B-201ENST00000276201 RPN1P04843 607 aaKnown RBP11.43□□□□□ -0.58
UPF3B-201ENST00000276201 RASA1P20936 1047 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 HOXA7P31268 230 aaPredicted RBP11.43□□□□□ -0.58
UPF3B-201ENST00000276201 HNRNPH3P31942 346 aaKnown RBP11.43□□□□□ -0.58
UPF3B-201ENST00000276201 LONP1P36776 959 aaKnown RBP11.43□□□□□ -0.58
UPF3B-201ENST00000276201 BACE1P56817 501 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 UBXN1Q04323 297 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 PPARAQ07869 468 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 GLE1Q53GS7 698 aaKnown RBP11.43□□□□□ -0.58
UPF3B-201ENST00000276201 TREML2Q5T2D2 321 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 ZNF296Q8WUU4 475 aaPredicted RBP11.43□□□□□ -0.58
UPF3B-201ENST00000276201 CAPS2Q9BXY5 557 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 KAT14Q9H8E8 782 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 FAM169AQ9Y6X4 670 aa11.43□□□□□ -0.58
UPF3B-201ENST00000276201 EPHB4P54760 987 aa11.42□□□□□ -0.58
UPF3B-201ENST00000276201 ZBED6P86452 979 aa11.42□□□□□ -0.58
UPF3B-201ENST00000276201 CTDSPL2Q05D32 466 aa11.42□□□□□ -0.58
UPF3B-201ENST00000276201 NPY5RQ15761 445 aa11.42□□□□□ -0.58
UPF3B-201ENST00000276201 COBLL1Q53SF7 1204 aa11.42□□□□□ -0.58
UPF3B-201ENST00000276201 TMEM179Q6ZVK1 233 aa11.42□□□□□ -0.58
UPF3B-201ENST00000276201 CLEC10AQ8IUN9 316 aa11.42□□□□□ -0.58
UPF3B-201ENST00000276201 PROCA1Q8NCQ7 364 aaPredicted RBP11.42□□□□□ -0.58
UPF3B-201ENST00000276201 ACER1Q8TDN7 264 aa11.42□□□□□ -0.58
UPF3B-201ENST00000276201 CCDC17Q96LX7 622 aa11.42□□□□□ -0.58
UPF3B-201ENST00000276201 ZFYVE28Q9HCC9 887 aa11.42□□□□□ -0.58
UPF3B-201ENST00000276201 AGTPBP1Q9UPW5 1226 aa11.42□□□□□ -0.58
UPF3B-201ENST00000276201 ADGRA2Q96PE1 1338 aa11.42□□□□□ -0.58
UPF3B-201ENST00000276201 GREB1LQ9C091 1923 aaPredicted RBP11.42□□□□□ -0.58
UPF3B-201ENST00000276201 USP17L10C9JJH3 530 aa11.42□□□□□ -0.58
UPF3B-201ENST00000276201 LCA5LO95447 670 aa11.42□□□□□ -0.58
UPF3B-201ENST00000276201 VAV2P52735 878 aa11.42□□□□□ -0.58
UPF3B-201ENST00000276201 CD302Q8IX05 232 aa11.42□□□□□ -0.58
UPF3B-201ENST00000276201 TRIM58Q8NG06 486 aa11.42□□□□□ -0.58
UPF3B-201ENST00000276201 MAGEF1Q9HAY2 307 aa11.42□□□□□ -0.58
UPF3B-201ENST00000276201 SNX12Q9UMY4 172 aa11.42□□□□□ -0.58
UPF3B-201ENST00000276201 DDAH1O94760 285 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 FSBPO95073 299 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 FGRP09769 529 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 CDC25AP30304 524 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 KIAA1328Q86T90 577 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 SMYD4Q8IYR2 804 aaPredicted RBP11.41□□□□□ -0.58
UPF3B-201ENST00000276201 MICALL1Q8N3F8 863 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 PRPF38AQ8NAV1 312 aaKnown RBP11.41□□□□□ -0.58
UPF3B-201ENST00000276201 DHTKD1Q96HY7 919 aaPredicted RBP11.41□□□□□ -0.58
UPF3B-201ENST00000276201 MTRQ99707 1265 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 RNF14Q9UBS8 474 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 SLC45A1Q9Y2W3 748 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 A0A1W2PRG0 241 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 C19orf81C9J6K1 198 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 TLR2O60603 784 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 FKTNO75072 461 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 PRDM1O75626 825 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 IPO7O95373 1038 aaKnown RBP11.41□□□□□ -0.58
UPF3B-201ENST00000276201 CYP2C8P10632 490 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 TCP1P17987 556 aaKnown RBP11.41□□□□□ -0.58
UPF3B-201ENST00000276201 SIAH1Q8IUQ4 282 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 MREGQ8N565 214 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 ERGIC2Q96RQ1 377 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 KIAA1683Q9H0B3 1180 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 MKNK2Q9HBH9 465 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 EMILIN3Q9NT22 766 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 HDAC6Q9UBN7 1215 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 TRIM10Q9UDY6 481 aa11.41□□□□□ -0.58
UPF3B-201ENST00000276201 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.41□□□□□ -0.58
UPF3B-201ENST00000276201 PDE2AO00408 941 aaPredicted RBP11.4□□□□□ -0.58
UPF3B-201ENST00000276201 RHOBTB3O94955 611 aa11.4□□□□□ -0.58
UPF3B-201ENST00000276201 MYBL2P10244 700 aa11.4□□□□□ -0.58
UPF3B-201ENST00000276201 PRCPP42785 496 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms