RNA–Protein interactions for RNA: ENST00000272454.10

RGPD5-202, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 2 BASIC

Gene RGPD5, Length 2,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-202ENST00000272454 FKBP3Q00688 224 aaKnown RBP16.96■□□□□ 0.3
RGPD5-202ENST00000272454 ZCWPW2Q504Y3 356 aa16.96■□□□□ 0.3
RGPD5-202ENST00000272454 B4GALNT4Q76KP1 1039 aa16.96■□□□□ 0.3
RGPD5-202ENST00000272454 NLRP14Q86W24 1093 aa16.96■□□□□ 0.3
RGPD5-202ENST00000272454 USP38Q8NB14 1042 aa16.96■□□□□ 0.3
RGPD5-202ENST00000272454 MYCBPAPQ8TBZ2 947 aa16.96■□□□□ 0.3
RGPD5-202ENST00000272454 IQCDQ96DY2 449 aa16.96■□□□□ 0.3
RGPD5-202ENST00000272454 ODF2LQ9ULJ1 636 aa16.96■□□□□ 0.3
RGPD5-202ENST00000272454 MDH1P40925 334 aaKnown RBP16.95■□□□□ 0.3
RGPD5-202ENST00000272454 SLC18A3Q16572 532 aa16.95■□□□□ 0.3
RGPD5-202ENST00000272454 TMEM266Q2M3C6 531 aa16.95■□□□□ 0.3
RGPD5-202ENST00000272454 FAM26FQ5R3K3 315 aa16.95■□□□□ 0.3
RGPD5-202ENST00000272454 NBPF5PQ86XG9 351 aaPredicted RBP16.95■□□□□ 0.3
RGPD5-202ENST00000272454 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.95■□□□□ 0.3
RGPD5-202ENST00000272454 LAMB1P07942 1786 aa16.95■□□□□ 0.3
RGPD5-202ENST00000272454 ITGB3BPQ13352 177 aaPredicted RBP16.95■□□□□ 0.3
RGPD5-202ENST00000272454 UAP1Q16222 522 aaPredicted RBP16.95■□□□□ 0.3
RGPD5-202ENST00000272454 CEP57Q86XR8 500 aa16.95■□□□□ 0.3
RGPD5-202ENST00000272454 DDX47Q9H0S4 455 aaKnown RBP16.95■□□□□ 0.3
RGPD5-202ENST00000272454 DOT1LQ8TEK3 1739 aa16.95■□□□□ 0.3
RGPD5-202ENST00000272454 MARCH6O60337 910 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 ITGA4P13612 1032 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 HSD17B3P37058 310 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 FXR2P51116 673 aaKnown RBP eCLIP16.94■□□□□ 0.3
RGPD5-202ENST00000272454 PTK2Q05397 1052 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 NFIXQ14938 502 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 SPRED3Q2MJR0 410 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 CHADLQ6NUI6 762 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 A1CFQ9NQ94 594 aaKnown RBP16.94■□□□□ 0.3
RGPD5-202ENST00000272454 MCM8Q9UJA3 840 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 PCDHGC5Q9Y5F6 944 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 FRMD3A2A2Y4 597 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 DCDC2CA8MYV0 355 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 C21orf2O43822 256 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 SLC9A1P19634 815 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 PAX7P23759 505 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 ECHS1P30084 290 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 BTDP43251 543 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 DDR1Q08345 913 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 LZTS2Q9BRK4 669 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 TSKSQ9UJT2 592 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 SNED1Q8TER0 1413 aa16.94■□□□□ 0.3
RGPD5-202ENST00000272454 ASIC2Q16515 512 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 SPTY2D1Q68D10 685 aaPredicted RBP16.93■□□□□ 0.3
RGPD5-202ENST00000272454 PTF1AQ7RTS3 328 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 HAS1Q92839 578 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 BCAS3Q9H6U6 928 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 RREB1Q92766 1687 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 SLURP2P0DP57 97 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 ADCY7P51828 1080 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 RPS6KA1Q15418 735 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 TMEM119Q4V9L6 283 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 HERC4Q5GLZ8 1057 aaPredicted RBP16.93■□□□□ 0.3
RGPD5-202ENST00000272454 ZNF571Q7Z3V5 609 aaPredicted RBP16.93■□□□□ 0.3
RGPD5-202ENST00000272454 TAF4BQ92750 862 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 RIC8AQ9NPQ8 531 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 KIAA1024Q9UPX6 916 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 COL22A1Q8NFW1 1626 aaPredicted RBP16.93■□□□□ 0.3
RGPD5-202ENST00000272454 ATP2C2O75185 946 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 FSBPO95073 299 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 BAG3O95817 575 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 QPCTQ16769 361 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 CLEC4GQ6UXB4 293 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 TRIM59Q8IWR1 403 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 ANKRD2Q9GZV1 360 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 TAF1DQ9H5J8 278 aaPredicted RBP16.93■□□□□ 0.3
RGPD5-202ENST00000272454 KLC4Q9NSK0 619 aa16.93■□□□□ 0.3
RGPD5-202ENST00000272454 POTEB3A0JP26 581 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 POTECB2RU33 542 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 SLC16A2P36021 539 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 STAT3P40763 770 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 EPS15P42566 896 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 CASP5P51878 434 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 SF3B2Q13435 895 aaKnown RBP16.92■□□□□ 0.3
RGPD5-202ENST00000272454 TTBK2Q6IQ55 1244 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 POTEBQ6S5H4 581 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 TEX11Q8IYF3 940 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 TMBIM4Q9HC24 238 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 ABCB11O95342 1321 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 TMCO5BA8MYB1 307 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 PPP1R12AO14974 1030 aaPredicted RBP16.92■□□□□ 0.3
RGPD5-202ENST00000272454 TNNC1P63316 161 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 KCNH2Q12809 1159 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 ADAM9Q13443 819 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 GJB7Q6PEY0 223 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 MREGQ8N565 214 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 NEDD1Q8NHV4 660 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 SCFD1Q8WVM8 642 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 UBLCP1Q8WVY7 318 aaPredicted RBP16.92■□□□□ 0.3
RGPD5-202ENST00000272454 RTFDC1Q9BY42 306 aaPredicted RBP16.92■□□□□ 0.3
RGPD5-202ENST00000272454 CELF4Q9BZC1 486 aaKnown RBP16.92■□□□□ 0.3
RGPD5-202ENST00000272454 TRIM31Q9BZY9 425 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 GANQ9H2C0 597 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 CNOT8Q9UFF9 292 aaKnown RBP16.92■□□□□ 0.3
RGPD5-202ENST00000272454 AJAP1Q9UKB5 411 aaPredicted RBP16.92■□□□□ 0.3
RGPD5-202ENST00000272454 ROBO3Q96MS0 1386 aa16.92■□□□□ 0.3
RGPD5-202ENST00000272454 PPP1R11O60927 126 aaPredicted RBP16.91■□□□□ 0.3
RGPD5-202ENST00000272454 PDHBP11177 359 aa16.91■□□□□ 0.3
RGPD5-202ENST00000272454 HSPA9P38646 679 aaKnown RBP16.91■□□□□ 0.3
RGPD5-202ENST00000272454 CDR1P51861 262 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms