RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 FIS1Q9Y3D6 152 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 DDAH1O94760 285 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 PYGMP11217 842 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 SMARCA1P28370 1054 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 SLC39A6Q13433 755 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 RGS9BPQ6ZS82 235 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 HORMAD1Q86X24 394 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 PHF21AQ96BD5 680 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 TUBGCP2Q9BSJ2 902 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 VAMP4O75379 141 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 COPB1P53618 953 aaKnown RBP13□□□□□ -0.33
SRRM4-201ENST00000267260 GUCY1A3Q02108 690 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 CPXCR1Q8N123 301 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 DNAJC17Q9NVM6 304 aaKnown RBP13□□□□□ -0.33
SRRM4-201ENST00000267260 GJA3Q9Y6H8 435 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 TESPA1A2RU30 521 aaPredicted RBP12.99□□□□□ -0.33
SRRM4-201ENST00000267260 ZNF189O75820 626 aaPredicted RBP12.99□□□□□ -0.33
SRRM4-201ENST00000267260 ALDH1B1P30837 517 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 DRP2Q13474 957 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 ARHGEF25Q86VW2 580 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 PYROXD1Q8WU10 500 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 APOBEC2Q9Y235 224 aaKnown RBP12.99□□□□□ -0.33
SRRM4-201ENST00000267260 ATP10DQ9P241 1426 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 ADGRF5Q8IZF2 1346 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 CFAP73A6NFT4 308 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 ORC4O43929 436 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 RSRC2Q7L4I2 434 aaKnown RBP12.99□□□□□ -0.33
SRRM4-201ENST00000267260 ZNF654Q8IZM8 581 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 RYBPQ8N488 228 aaPredicted RBP12.99□□□□□ -0.33
SRRM4-201ENST00000267260 KIF2CQ99661 725 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 TSPOAP1O95153 1857 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 GADD45BO75293 160 aaPredicted RBP12.99□□□□□ -0.33
SRRM4-201ENST00000267260 AARSP49588 968 aaKnown RBP eCLIP12.99□□□□□ -0.33
SRRM4-201ENST00000267260 DEPDC1Q5TB30 811 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 ZNF713Q8N859 430 aaPredicted RBP12.99□□□□□ -0.33
SRRM4-201ENST00000267260 NEK9Q8TD19 979 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 CSADQ9Y600 493 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 SYNGAP1Q96PV0 1343 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 MYO1EQ12965 1108 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 TBC1D1Q86TI0 1168 aaPredicted RBP12.99□□□□□ -0.33
SRRM4-201ENST00000267260 TUBGCP3Q96CW5 907 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 VPS39Q96JC1 886 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.99□□□□□ -0.33
SRRM4-201ENST00000267260 OSBPL1AQ9BXW6 950 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 TBK1Q9UHD2 729 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 SH3TC1Q8TE82 1336 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 TRAPPC8Q9Y2L5 1435 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 AFPP02771 609 aaKnown RBP12.99□□□□□ -0.33
SRRM4-201ENST00000267260 SOX5P35711 763 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 SURF1Q15526 300 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 ADCK1Q86TW2 530 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 PHACTR3Q96KR7 559 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 PITPNM3Q9BZ71 974 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 CAB39Q9Y376 341 aaPredicted RBP12.99□□□□□ -0.33
SRRM4-201ENST00000267260 ZNF532Q9HCE3 1301 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 DHX9Q08211 1270 aaKnown RBP12.99□□□□□ -0.33
SRRM4-201ENST00000267260 TLK2Q86UE8 772 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 ZFP69BQ9UJL9 534 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 LZTS1Q9Y250 596 aa12.99□□□□□ -0.33
SRRM4-201ENST00000267260 LUZP2Q86TE4 346 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.98□□□□□ -0.33
SRRM4-201ENST00000267260 PLEKHG3A1L390 1219 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 HNRNPRO43390 633 aaKnown RBP12.98□□□□□ -0.33
SRRM4-201ENST00000267260 LZTS3O60299 673 aaPredicted RBP12.98□□□□□ -0.33
SRRM4-201ENST00000267260 SERPING1P05155 500 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 C4BPBP20851 252 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 EMBQ6PCB8 327 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 FBXO18Q8NFZ0 1043 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 ZNF653Q96CK0 615 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 GCNAQ96QF7 691 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 MTRQ99707 1265 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 CDCA7Q9BWT1 371 aaPredicted RBP12.98□□□□□ -0.33
SRRM4-201ENST00000267260 KDM4CQ9H3R0 1056 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 SMYD3Q9H7B4 428 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 TMEM206Q9H813 350 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 ELMSAN1Q6PJG2 1045 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 LRRIQ4A6NIV6 560 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 TRAPPC10P48553 1259 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 GCNT4Q9P109 453 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 RNF103-CHMP3A0A140T963 221 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 H0YIN7 160 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 MYO1CO00159 1063 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 MEIS1O00470 390 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 MAP4P27816 1152 aaKnown RBP12.98□□□□□ -0.33
SRRM4-201ENST00000267260 EIF4A2Q14240 407 aaKnown RBP12.98□□□□□ -0.33
SRRM4-201ENST00000267260 TTLL7Q6ZT98 887 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 ABI1Q8IZP0 508 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 GCOM2Q9BZD3 368 aaPredicted RBP12.98□□□□□ -0.33
SRRM4-201ENST00000267260 ASCC2Q9H1I8 757 aaPredicted RBP12.98□□□□□ -0.33
SRRM4-201ENST00000267260 TRAF3IP3Q9Y228 551 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 TMEM191CA6NGB0 347 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 STXBP3O00186 592 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 SLC9A1P19634 815 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 PAPOLAP51003 745 aaKnown RBP12.98□□□□□ -0.33
SRRM4-201ENST00000267260 BASP1P80723 227 aaKnown RBP12.98□□□□□ -0.33
SRRM4-201ENST00000267260 CYP4F22Q6NT55 531 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 PARP9Q8IXQ6 854 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 PDIK1LQ8N165 341 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 KCNJ14Q9UNX9 436 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 UHRF1BP1LA0JNW5 1464 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms