RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 ZBTB16Q05516 673 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 TROAPQ12815 778 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 SEL1L2Q5TEA6 688 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 LRCH2Q5VUJ6 765 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 VSIG1Q86XK7 387 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 CCDC63Q8NA47 563 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 NOA1Q8NC60 698 aaKnown RBP12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 H3BQF6 201 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 FOSP01100 380 aaPredicted RBP12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 ATP1A1P05023 1023 aaKnown RBP12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 FGRP09769 529 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 EIF4A3P38919 411 aaKnown RBP12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 SPON1Q9HCB6 807 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 MTMR4Q9NYA4 1195 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 TBC1D7Q9P0N9 293 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 STK38LQ9Y2H1 464 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 FXR1P51114 621 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 POLR2FP61218 127 aaKnown RBP12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 HS2ST1Q7LGA3 356 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 NEK8Q86SG6 692 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 TCP11Q8WWU5 503 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 PNKPQ96T60 521 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 THAP9Q9H5L6 903 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 L1RE1Q9UN81 338 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 FRMPD2Q68DX3 1309 aaPredicted RBP12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 TARSL2A2RTX5 802 aaKnown RBP12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 LGALS16A8MUM7 142 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 NMT2O60551 498 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 ZRANB2O95218 330 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 KIF11P52732 1056 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 ORC2Q13416 577 aaPredicted RBP12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 COL9A3Q14050 684 aaPredicted RBP12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 R3HDM1Q15032 1099 aaKnown RBP12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 TRIM65Q6PJ69 517 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 WHAMMQ8TF30 809 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 MMS19Q96T76 1030 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 AMNQ9BXJ7 453 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 NYAP2Q9P242 653 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 PCDHA13Q9Y5I0 950 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 CD2APQ9Y5K6 639 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 PNMA6FA0A0J9YX94 578 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 HMGB1P1B2RPK0 211 aaPredicted RBP12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 GUCY2CP25092 1073 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 PEX19P40855 299 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 NCAPHQ15003 741 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 USP17L2Q6R6M4 530 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 CCDC197Q8NCU1 140 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 OXER1Q8TDS5 423 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 FAM151AQ8WW52 585 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 ADD3Q9UEY8 706 aaKnown RBP12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 SCN7AQ01118 1682 aa12.6□□□□□ -0.39
CLSTN3-201ENST00000266546 NPM3O75607 178 aaKnown RBP12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 SASH3O75995 380 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 ASNSP08243 561 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 BMP3P12645 472 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 CTNNA2P26232 953 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 GUCY1A2P33402 732 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 CUL4BQ13620 913 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 DACT2Q5SW24 774 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 FBXO11Q86XK2 927 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 CEP83Q9Y592 693 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 EPB41P11171 864 aaKnown RBP12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 CCNE1P24864 410 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 TECP42680 631 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 SLC20A2Q08357 652 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 FBXW10Q5XX13 1052 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 ARMC9Q7Z3E5 817 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 CHP1Q99653 195 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 PSTPIP2Q9H939 334 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 AMFRQ9UKV5 643 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 FTCDO95954 541 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 OR52Z1P0C646 297 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 AKR1B1P15121 316 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 TNFAIP3P21580 790 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 GBP1P32455 592 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 CALCRLQ16602 461 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 ARL6IP4Q66PJ3 421 aaKnown RBP12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 HIBCHQ6NVY1 386 aaPredicted RBP12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 RSRC2Q7L4I2 434 aaKnown RBP12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 FAM160B2Q86V87 743 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 MYOCDQ8IZQ8 938 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 NBPF3Q9H094 633 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 HOMER3Q9NSC5 361 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 PPFIBP2Q8ND30 876 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 MGARPQ8TDB4 240 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 IDI2Q9BXS1 227 aa12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 MRPL11Q9Y3B7 192 aaKnown RBP12.59□□□□□ -0.39
CLSTN3-201ENST00000266546 TRIM49BA6NDI0 452 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 FOXP2O15409 715 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 CTNND1O60716 968 aaKnown RBP12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 GCFC2P16383 781 aaKnown RBP12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 PLS1Q14651 629 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 PPP2R5AQ15172 486 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 SUPT20HL1Q3ZLR7 823 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 SRBD1Q8N5C6 995 aaKnown RBP12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 PPP1R12CQ9BZL4 782 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 TMOD4Q9NZQ9 345 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 FBXO2Q9UK22 296 aaPredicted RBP12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 CCDC169A6NNP5 214 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 SPOPO43791 374 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms