RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 PEX3P56589 373 aa16.78■□□□□ 0.28
TIMP3-201ENST00000266085 CDC42EP5Q6NZY7 148 aa16.78■□□□□ 0.28
TIMP3-201ENST00000266085 B4GALNT4Q76KP1 1039 aa16.78■□□□□ 0.28
TIMP3-201ENST00000266085 NSUN6Q8TEA1 469 aaKnown RBP16.78■□□□□ 0.28
TIMP3-201ENST00000266085 OTUD5Q96G74 571 aa16.78■□□□□ 0.28
TIMP3-201ENST00000266085 MED10Q9BTT4 135 aa16.78■□□□□ 0.28
TIMP3-201ENST00000266085 POLD4Q9HCU8 107 aa16.78■□□□□ 0.28
TIMP3-201ENST00000266085 CNOT7Q9UIV1 285 aaKnown RBP16.78■□□□□ 0.28
TIMP3-201ENST00000266085 SRGAP2CP0DJJ0 459 aa16.78■□□□□ 0.28
TIMP3-201ENST00000266085 VPS41P49754 854 aa16.78■□□□□ 0.28
TIMP3-201ENST00000266085 GUCY2FP51841 1108 aa16.78■□□□□ 0.28
TIMP3-201ENST00000266085 STXBP2Q15833 593 aa16.78■□□□□ 0.28
TIMP3-201ENST00000266085 PPP4R3CPQ6ZMV5 832 aa16.78■□□□□ 0.28
TIMP3-201ENST00000266085 POTEDQ86YR6 584 aa16.78■□□□□ 0.28
TIMP3-201ENST00000266085 MICALL2Q8IY33 904 aa16.78■□□□□ 0.28
TIMP3-201ENST00000266085 RSAD2Q8WXG1 361 aa16.78■□□□□ 0.28
TIMP3-201ENST00000266085 RPS6KC1Q96S38 1066 aa16.78■□□□□ 0.28
TIMP3-201ENST00000266085 KIF28PB7ZC32 967 aa16.77■□□□□ 0.28
TIMP3-201ENST00000266085 XPOTO43592 962 aaKnown RBP16.77■□□□□ 0.28
TIMP3-201ENST00000266085 TDP2O95551 362 aa16.77■□□□□ 0.28
TIMP3-201ENST00000266085 PPP2R5DQ14738 602 aa16.77■□□□□ 0.28
TIMP3-201ENST00000266085 RAB3IL1Q8TBN0 382 aa16.77■□□□□ 0.28
TIMP3-201ENST00000266085 NSMCE1Q8WV22 266 aa16.77■□□□□ 0.28
TIMP3-201ENST00000266085 CEP63Q96MT8 703 aa16.77■□□□□ 0.28
TIMP3-201ENST00000266085 GOLPH3LQ9H4A5 285 aa16.77■□□□□ 0.28
TIMP3-201ENST00000266085 GCNT4Q9P109 453 aa16.77■□□□□ 0.28
TIMP3-201ENST00000266085 TTLL3Q9Y4R7 772 aa16.77■□□□□ 0.28
TIMP3-201ENST00000266085 E9PMD0 336 aa16.77■□□□□ 0.28
TIMP3-201ENST00000266085 UNC13DQ70J99 1090 aa16.77■□□□□ 0.28
TIMP3-201ENST00000266085 ADAT2Q7Z6V5 191 aaKnown RBP16.77■□□□□ 0.28
TIMP3-201ENST00000266085 HHIPL2Q6UWX4 724 aa16.77■□□□□ 0.28
TIMP3-201ENST00000266085 NBPF3Q9H094 633 aa16.77■□□□□ 0.28
TIMP3-201ENST00000266085 PCDHB4Q9Y5E5 795 aa16.77■□□□□ 0.28
TIMP3-201ENST00000266085 PP2D1A8MPX8 630 aa16.77■□□□□ 0.27
TIMP3-201ENST00000266085 ENC1O14682 589 aa16.77■□□□□ 0.27
TIMP3-201ENST00000266085 TBC1D8O95759 1140 aa16.77■□□□□ 0.27
TIMP3-201ENST00000266085 OAS2P29728 719 aaKnown RBP16.77■□□□□ 0.27
TIMP3-201ENST00000266085 CTNNA1P35221 906 aaKnown RBP16.77■□□□□ 0.27
TIMP3-201ENST00000266085 OSTNP61366 133 aa16.77■□□□□ 0.27
TIMP3-201ENST00000266085 MESDQ14696 234 aa16.77■□□□□ 0.27
TIMP3-201ENST00000266085 KRT31Q15323 416 aa16.77■□□□□ 0.27
TIMP3-201ENST00000266085 RSPH3Q86UC2 560 aa16.77■□□□□ 0.27
TIMP3-201ENST00000266085 FAM81BQ96LP2 452 aa16.77■□□□□ 0.27
TIMP3-201ENST00000266085 PPP1R16BQ96T49 567 aa16.77■□□□□ 0.27
TIMP3-201ENST00000266085 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.76■□□□□ 0.27
TIMP3-201ENST00000266085 ALCAMQ13740 583 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 SLC15A2Q16348 729 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 CCDC170Q8IYT3 715 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 GRK7Q8WTQ7 553 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 NLRP4Q96MN2 994 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 FAM193BQ96PV7 902 aaPredicted RBP16.76■□□□□ 0.27
TIMP3-201ENST00000266085 PPANQ9NQ55 473 aaKnown RBP16.76■□□□□ 0.27
TIMP3-201ENST00000266085 POTEB3A0JP26 581 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 POTECB2RU33 542 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 TLR3O15455 904 aaKnown RBP16.76■□□□□ 0.27
TIMP3-201ENST00000266085 GYS1P13807 737 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 KLRK1P26718 216 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 KRT81Q14533 505 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 ARHGEF6Q15052 776 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 TCP11X2Q5H9J9 407 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 POTEBQ6S5H4 581 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 VPS37BQ9H9H4 285 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 ABCB11O95342 1321 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 WDR64B1ANS9 1081 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 ADCY8P40145 1251 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 RABGGTAQ92696 567 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 SPZ1Q9BXG8 430 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 PLCB1Q9NQ66 1216 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 HMGCS2P54868 508 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 SRGAP1Q7Z6B7 1085 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 DEFB132Q7Z7B7 95 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 FAM133AQ8N9E0 248 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 TBC1D22BQ9NU19 505 aa16.76■□□□□ 0.27
TIMP3-201ENST00000266085 GOLGA8IPA6NC78 632 aa16.75■□□□□ 0.27
TIMP3-201ENST00000266085 GOLGA8JA6NMD2 632 aa16.75■□□□□ 0.27
TIMP3-201ENST00000266085 JAK3P52333 1124 aa16.75■□□□□ 0.27
TIMP3-201ENST00000266085 ANTXR2P58335 489 aa16.75■□□□□ 0.27
TIMP3-201ENST00000266085 ORC2Q13416 577 aaPredicted RBP16.75■□□□□ 0.27
TIMP3-201ENST00000266085 MAP7D1Q3KQU3 841 aa16.75■□□□□ 0.27
TIMP3-201ENST00000266085 ZBTB33Q86T24 672 aa16.75■□□□□ 0.27
TIMP3-201ENST00000266085 NLRP7Q8WX94 980 aa16.75■□□□□ 0.27
TIMP3-201ENST00000266085 DPH5Q9H2P9 285 aa16.75■□□□□ 0.27
TIMP3-201ENST00000266085 NXF1Q9UBU9 619 aaKnown RBP16.75■□□□□ 0.27
TIMP3-201ENST00000266085 NDUFB10O96000 172 aa16.75■□□□□ 0.27
TIMP3-201ENST00000266085 PRELPP51888 382 aa16.75■□□□□ 0.27
TIMP3-201ENST00000266085 ZNF543Q08ER8 600 aa16.75■□□□□ 0.27
TIMP3-201ENST00000266085 HHATQ5VTY9 493 aa16.75■□□□□ 0.27
TIMP3-201ENST00000266085 FYB2Q5VWT5 728 aa16.75■□□□□ 0.27
TIMP3-201ENST00000266085 NAA35Q5VZE5 725 aa16.75■□□□□ 0.27
TIMP3-201ENST00000266085 BANK1Q8NDB2 785 aa16.75■□□□□ 0.27
TIMP3-201ENST00000266085 ANKRD36BP1Q96IX9 119 aa16.75■□□□□ 0.27
TIMP3-201ENST00000266085 LDHDQ86WU2 507 aa16.75■□□□□ 0.27
TIMP3-201ENST00000266085 RGS16O15492 202 aaPredicted RBP16.74■□□□□ 0.27
TIMP3-201ENST00000266085 ENTPD3O75355 529 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 STAT3P40763 770 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 EZH2Q15910 746 aaKnown RBP16.74■□□□□ 0.27
TIMP3-201ENST00000266085 BSPRYQ5W0U4 402 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 SARM1Q6SZW1 724 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 PLCD3Q8N3E9 789 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 PANX2Q96RD6 677 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms