RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 PCIF1Q9H4Z3 704 aa18.62■□□□□ 0.57
SRF-201ENST00000265354 POC1B-GALNT4F8VUJ3 575 aa18.62■□□□□ 0.57
SRF-201ENST00000265354 WDR66Q8TBY9 1149 aa18.62■□□□□ 0.57
SRF-201ENST00000265354 TAF1DQ9H5J8 278 aaPredicted RBP18.62■□□□□ 0.57
SRF-201ENST00000265354 HOMER2Q9NSB8 354 aa18.62■□□□□ 0.57
SRF-201ENST00000265354 PCDHA1Q9Y5I3 950 aa18.62■□□□□ 0.57
SRF-201ENST00000265354 SMIM24O75264 130 aa18.61■□□□□ 0.57
SRF-201ENST00000265354 ZC3H12CQ9C0D7 883 aaKnown RBP18.61■□□□□ 0.57
SRF-201ENST00000265354 USP17L15C9J2P7 530 aa18.61■□□□□ 0.57
SRF-201ENST00000265354 USP17L13C9JLJ4 530 aa18.61■□□□□ 0.57
SRF-201ENST00000265354 USP17L11C9JVI0 530 aa18.61■□□□□ 0.57
SRF-201ENST00000265354 USP17L18D6R9N7 530 aa18.61■□□□□ 0.57
SRF-201ENST00000265354 USP17L22D6RA61 530 aa18.61■□□□□ 0.57
SRF-201ENST00000265354 USP17L17D6RBQ6 530 aa18.61■□□□□ 0.57
SRF-201ENST00000265354 USP17L19D6RCP7 530 aa18.61■□□□□ 0.57
SRF-201ENST00000265354 USP17L20D6RJB6 530 aa18.61■□□□□ 0.57
SRF-201ENST00000265354 USP17L24Q0WX57 530 aa18.61■□□□□ 0.57
SRF-201ENST00000265354 ZNF746Q6NUN9 644 aaPredicted RBP18.61■□□□□ 0.57
SRF-201ENST00000265354 USP17L6PQ6QN14 398 aa18.61■□□□□ 0.57
SRF-201ENST00000265354 NT5C3AQ9H0P0 336 aa18.61■□□□□ 0.57
SRF-201ENST00000265354 TNIP1Q15025 636 aa18.61■□□□□ 0.57
SRF-201ENST00000265354 ZNF449Q6P9G9 518 aa18.61■□□□□ 0.57
SRF-201ENST00000265354 IQCGQ9H095 443 aaKnown RBP18.61■□□□□ 0.57
SRF-201ENST00000265354 CUEDC2Q9H467 287 aa18.61■□□□□ 0.57
SRF-201ENST00000265354 ARHGAP20Q9P2F6 1191 aa18.61■□□□□ 0.57
SRF-201ENST00000265354 THRAP3Q9Y2W1 955 aaKnown RBP18.61■□□□□ 0.57
SRF-201ENST00000265354 THAP12O43422 761 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 ALDH3A1P30838 453 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 HP1BP3Q5SSJ5 553 aaPredicted RBP18.6■□□□□ 0.57
SRF-201ENST00000265354 FAM182BQ5T319 152 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 PPP1R14CQ8TAE6 165 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 SH3RF3Q8TEJ3 882 aaPredicted RBP18.6■□□□□ 0.57
SRF-201ENST00000265354 PACSIN1Q9BY11 444 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 TMOD4Q9NZQ9 345 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 PNMA2Q9UL42 364 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 G3BP2Q9UN86 482 aaKnown RBP18.6■□□□□ 0.57
SRF-201ENST00000265354 PXDNQ92626 1479 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 PLA2G4BP0C869 781 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 PPP2R2AP63151 447 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 DR1Q01658 176 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 HOMEZQ8IX15 550 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 SPICE1Q8N0Z3 855 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 IQCDQ96DY2 449 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 ZMYND12Q9H0C1 365 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 SUDS3Q9H7L9 328 aaPredicted RBP18.6■□□□□ 0.57
SRF-201ENST00000265354 POTEB3A0JP26 581 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 USP17L5A8MUK1 530 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 POTECB2RU33 542 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 POTEBQ6S5H4 581 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 PARP9Q8IXQ6 854 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 NEK9Q8TD19 979 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 VPS37BQ9H9H4 285 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 RNF14Q9UBS8 474 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 LOC102724428A0A0B4J2F2 783 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 MYMKA6NI61 221 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 SIK1P57059 783 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 NSMFQ6X4W1 530 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 UNC13DQ70J99 1090 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 GIMAP8Q8ND71 665 aaPredicted RBP18.6■□□□□ 0.57
SRF-201ENST00000265354 PCDHA6Q9UN73 950 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 PCDHA8Q9Y5H6 950 aa18.6■□□□□ 0.57
SRF-201ENST00000265354 WDR91A4D1P6 747 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 SKAP2O75563 359 aaPredicted RBP18.59■□□□□ 0.57
SRF-201ENST00000265354 GNA14O95837 355 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 STAT3P40763 770 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 RANBP1P43487 201 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 PKN1Q16512 942 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 SEPT14Q6ZU15 432 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 ADGRA1Q86SQ6 560 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 GLYCTKQ8IVS8 523 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 PIGOQ8TEQ8 1089 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 MTMR8Q96EF0 704 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 ZNF804BA4D1E1 1349 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 ADAMTS13Q76LX8 1427 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 USP32Q8NFA0 1604 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 RASGRF2O14827 1237 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 AFPP02771 609 aaKnown RBP18.59■□□□□ 0.57
SRF-201ENST00000265354 CCDC13Q8IYE1 715 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 SPDL1Q96EA4 605 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 MED15Q96RN5 788 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 AZI2Q9H6S1 392 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 YY1AP1Q9H869 796 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 RIC8AQ9NPQ8 531 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 A0A087X0T9 212 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 CSF1RP07333 972 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 FAM228BP0C875 321 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 PAPD7Q5XG87 772 aaKnown RBP18.59■□□□□ 0.57
SRF-201ENST00000265354 NAIF1Q69YI7 327 aaPredicted RBP18.59■□□□□ 0.57
SRF-201ENST00000265354 PSMD1Q99460 953 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 LZTS2Q9BRK4 669 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 BHMT2Q9H2M3 363 aa18.59■□□□□ 0.57
SRF-201ENST00000265354 NOC2LQ9Y3T9 749 aaKnown RBP18.59■□□□□ 0.57
SRF-201ENST00000265354 PTPRUQ92729 1446 aa18.58■□□□□ 0.57
SRF-201ENST00000265354 IL6STP40189 918 aaPredicted RBP18.58■□□□□ 0.57
SRF-201ENST00000265354 BIRC3Q13489 604 aa18.58■□□□□ 0.57
SRF-201ENST00000265354 KAZNQ674X7 775 aa18.58■□□□□ 0.57
SRF-201ENST00000265354 CYFIP2Q96F07 1278 aa18.58■□□□□ 0.57
SRF-201ENST00000265354 WDR17Q8IZU2 1322 aa18.58■□□□□ 0.57
SRF-201ENST00000265354 RHOBTB3O94955 611 aa18.58■□□□□ 0.56
SRF-201ENST00000265354 EVX2Q03828 476 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms