RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 ZNF131P52739 623 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 MSL1Q68DK7 614 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 FRMD5Q7Z6J6 570 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 PLCB1Q9NQ66 1216 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 ZNF70Q9UC06 446 aaPredicted RBP12.35□□□□□ -0.43
MSH3-201ENST00000265081 TLR2O60603 784 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 KIF20AO95235 890 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 TERF2Q15554 542 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 GPBP1Q86WP2 473 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 FIZ1Q96SL8 496 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 WDR18Q9BV38 432 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 A0A0G2JMZ2 1700 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 G3V3G9 751 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 PDXKO00764 312 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 EIF3DO15371 548 aaKnown RBP eCLIP12.35□□□□□ -0.43
MSH3-201ENST00000265081 EYA4O95677 639 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 ATP1A1P05023 1023 aaKnown RBP12.35□□□□□ -0.43
MSH3-201ENST00000265081 STAT3P40763 770 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 DCAF8Q5TAQ9 597 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 OTOP1Q7RTM1 612 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 RTKN2Q8IZC4 609 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 MYH11P35749 1972 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 LCTP09848 1927 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 LRRC53A6NM62 1247 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 HSD17B4P51659 736 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 CSRNP1Q96S65 589 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 EPC1Q9H2F5 836 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 EMILIN3Q9NT22 766 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 ZBTB21Q9ULJ3 1066 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 ASTN1O14525 1302 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 PTGER2P43116 358 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 STAT2P52630 851 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 PSMC6P62333 389 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 ERMNQ8TAM6 284 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 KCND2Q9NZV8 630 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 PCDHA13Q9Y5I0 950 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 NPHP3-ACAD11A0A0J9YXS1 232 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 POTEFA5A3E0 1075 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 PLEKP08567 350 aaPredicted RBP12.34□□□□□ -0.43
MSH3-201ENST00000265081 POTEIP0CG38 1075 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 KIF11P52732 1056 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 POTEGQ6S5H5 508 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 POTEEQ6S8J3 1075 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 AGBL3Q8NEM8 1001 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 OLIG1Q8TAK6 271 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 REEP2Q9BRK0 252 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 L1RE1Q9UN81 338 aa12.34□□□□□ -0.43
MSH3-201ENST00000265081 CASP5P51878 434 aa12.33□□□□□ -0.43
MSH3-201ENST00000265081 LRRC41Q15345 812 aa12.33□□□□□ -0.43
MSH3-201ENST00000265081 CCDC122Q5T0U0 273 aa12.33□□□□□ -0.43
MSH3-201ENST00000265081 GOPCQ9HD26 462 aa12.33□□□□□ -0.43
MSH3-201ENST00000265081 BMP2KQ9NSY1 1161 aaPredicted RBP12.33□□□□□ -0.43
MSH3-201ENST00000265081 GTPBP10A4D1E9 387 aaKnown RBP12.33□□□□□ -0.44
MSH3-201ENST00000265081 ANXA13P27216 316 aa12.33□□□□□ -0.44
MSH3-201ENST00000265081 TSR1Q2NL82 804 aaKnown RBP12.33□□□□□ -0.44
MSH3-201ENST00000265081 ARHGEF10LQ9HCE6 1279 aa12.33□□□□□ -0.44
MSH3-201ENST00000265081 COL11A1P12107 1806 aaPredicted RBP12.33□□□□□ -0.44
MSH3-201ENST00000265081 BCRP11274 1271 aa12.33□□□□□ -0.44
MSH3-201ENST00000265081 USP14P54578 494 aa12.33□□□□□ -0.44
MSH3-201ENST00000265081 JAM2P57087 298 aa12.33□□□□□ -0.44
MSH3-201ENST00000265081 C1orf186Q6ZWK4 172 aa12.33□□□□□ -0.44
MSH3-201ENST00000265081 NIPA1Q7RTP0 329 aa12.33□□□□□ -0.44
MSH3-201ENST00000265081 RNF10Q8N5U6 811 aaKnown RBP12.33□□□□□ -0.44
MSH3-201ENST00000265081 VCPKMTQ9H867 229 aa12.33□□□□□ -0.44
MSH3-201ENST00000265081 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.33□□□□□ -0.44
MSH3-201ENST00000265081 SAR1BQ9Y6B6 198 aa12.33□□□□□ -0.44
MSH3-201ENST00000265081 CTAGE15A4D2H0 777 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 EML1O00423 815 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 SEC31AO94979 1220 aaKnown RBP12.32□□□□□ -0.44
MSH3-201ENST00000265081 CTAGE8P0CG41 777 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 KNOP1Q1ED39 458 aaKnown RBP12.32□□□□□ -0.44
MSH3-201ENST00000265081 LONRF2Q1L5Z9 754 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 PRR16Q569H4 304 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 TEX35Q5T0J7 233 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 CTAGE6Q86UF2 777 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 FAM160B2Q86V87 743 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 CTAGE4Q8IX94 777 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 SAMD3Q8N6K7 520 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 TRIM58Q8NG06 486 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 EIF2AK1Q9BQI3 630 aaKnown RBP12.32□□□□□ -0.44
MSH3-201ENST00000265081 GUCA1BQ9UMX6 200 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 JRKLQ9Y4A0 524 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 SPDYE3A6NKU9 549 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 PHF20L1A8MW92 1017 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 SERPING1P05155 500 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 ECE1P42892 770 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 CREG2Q8IUH2 290 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 ARFGAP3Q9NP61 516 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 GINM1Q9NU53 330 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 SNX12Q9UMY4 172 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 RABGAP1Q9Y3P9 1069 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 ZNF536O15090 1300 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 SLITRK3O94933 977 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 TFRCP02786 760 aaKnown RBP12.32□□□□□ -0.44
MSH3-201ENST00000265081 GAP43P17677 238 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 ATP2B2Q01814 1243 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 CCDC155Q8N6L0 562 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 NOA1Q8NC60 698 aaKnown RBP12.32□□□□□ -0.44
MSH3-201ENST00000265081 TFR2Q9UP52 801 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 DNM3Q9UQ16 869 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms