RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ALCAMQ13740 583 aa15.21■□□□□ 0.03
CDH3-201ENST00000264012 TRIM11Q96F44 468 aa15.21■□□□□ 0.03
CDH3-201ENST00000264012 KIDINS220Q9ULH0 1771 aa15.21■□□□□ 0.03
CDH3-201ENST00000264012 TRIM49BA6NDI0 452 aa15.21■□□□□ 0.02
CDH3-201ENST00000264012 TLR3O15455 904 aaKnown RBP15.21■□□□□ 0.02
CDH3-201ENST00000264012 QRICH1Q2TAL8 776 aa15.21■□□□□ 0.02
CDH3-201ENST00000264012 EXOC8Q8IYI6 725 aa15.21■□□□□ 0.02
CDH3-201ENST00000264012 UHMK1Q8TAS1 419 aaKnown RBP15.21■□□□□ 0.02
CDH3-201ENST00000264012 FAM81BQ96LP2 452 aa15.21■□□□□ 0.02
CDH3-201ENST00000264012 JCADQ9P266 1359 aa15.21■□□□□ 0.02
CDH3-201ENST00000264012 MOCS3O95396 460 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 FTCDO95954 541 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 ATF2P15336 505 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 GUCY1A2P33402 732 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 RFX5P48382 616 aaPredicted RBP15.2■□□□□ 0.02
CDH3-201ENST00000264012 SPATA31A1Q5TZJ5 1347 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 GOLGA8KD6RF30 607 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 AKR1B1P15121 316 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 VPS72Q15906 364 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 POTEDQ86YR6 584 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 STAG2Q8N3U4 1231 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 HAUS1Q96CS2 278 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 ZNF512BQ96KM6 892 aaPredicted RBP15.2■□□□□ 0.02
CDH3-201ENST00000264012 RMDN3Q96TC7 470 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 MED4Q9NPJ6 270 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 HOMER3Q9NSC5 361 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 JRKLQ9Y4A0 524 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 CD163L1Q9NR16 1453 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 NRXN1Q9ULB1 1477 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 MAPK4P31152 587 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 STX2P32856 288 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 KIF22Q14807 665 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 SHC4Q6S5L8 630 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 SMC1BQ8NDV3 1235 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 FAM20AQ96MK3 541 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 TYW1Q9NV66 732 aaKnown RBP15.2■□□□□ 0.02
CDH3-201ENST00000264012 E9PMD0 336 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 PRR29P0C7W0 189 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 CXCR5P32302 372 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 PRCPP42785 496 aa15.2■□□□□ 0.02
CDH3-201ENST00000264012 SARNPP82979 210 aaKnown RBP15.2■□□□□ 0.02
CDH3-201ENST00000264012 ORC2Q13416 577 aaPredicted RBP15.2■□□□□ 0.02
CDH3-201ENST00000264012 PVALEFA0A1B0GWK0 134 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 I3L4J1 428 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 XPOTO43592 962 aaKnown RBP15.19■□□□□ 0.02
CDH3-201ENST00000264012 PEX3P56589 373 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 GNGT1P63211 74 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 ADGRF4Q8IZF3 695 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 TBC1D16Q8TBP0 767 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 BPIFA3Q9BQP9 254 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 ZNF277Q9NRM2 450 aaPredicted RBP15.19■□□□□ 0.02
CDH3-201ENST00000264012 ADAMTS1Q9UHI8 967 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 FEM1BQ9UK73 627 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 PCDHA13Q9Y5I0 950 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 PGRMC1O00264 195 aaKnown RBP15.19■□□□□ 0.02
CDH3-201ENST00000264012 ATP1A2P50993 1020 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 MTMR1Q13613 665 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 SRBD1Q8N5C6 995 aaKnown RBP15.19■□□□□ 0.02
CDH3-201ENST00000264012 RAD54LQ92698 747 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 GOLGA8IPA6NC78 632 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 GOLGA8JA6NMD2 632 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 LGALS16A8MUM7 142 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 PHBP35232 272 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 CAPN12Q6ZSI9 719 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 SFR1Q86XK3 245 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 PDE11AQ9HCR9 933 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 ZC3H13Q5T200 1668 aaKnown RBP15.19■□□□□ 0.02
CDH3-201ENST00000264012 PP2D1A8MPX8 630 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 CRCPO75575 148 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 ZMYND10O75800 440 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 HEXIM1O94992 359 aaKnown RBP15.19■□□□□ 0.02
CDH3-201ENST00000264012 PRR5LQ6MZQ0 368 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 IGDCC4Q8TDY8 1250 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 STMN2Q93045 179 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 RAVER2Q9HCJ3 691 aaKnown RBP15.19■□□□□ 0.02
CDH3-201ENST00000264012 SUGT1Q9Y2Z0 365 aa15.19■□□□□ 0.02
CDH3-201ENST00000264012 K7ERI5 159 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 GBP1P32455 592 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 ARHGAP25P42331 645 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 FRMPD1Q5SYB0 1578 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 SPOUT1Q5T280 376 aaKnown RBP15.18■□□□□ 0.02
CDH3-201ENST00000264012 C10orf76Q5T2E6 689 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 MAP7D3Q8IWC1 876 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 TAB3Q8N5C8 712 aaPredicted RBP15.18■□□□□ 0.02
CDH3-201ENST00000264012 BBOF1Q8ND07 529 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 CCT6BQ92526 530 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 RPS6KC1Q96S38 1066 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 NUB1Q9Y5A7 615 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 ZHX2Q9Y6X8 837 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 POTEB3A0JP26 581 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 POTECB2RU33 542 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 NTSR2O95665 410 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 PRELPP51888 382 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 JAK3P52333 1124 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 ATP2C1P98194 919 aaPredicted RBP15.18■□□□□ 0.02
CDH3-201ENST00000264012 POTEBQ6S5H4 581 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 LINC00116Q8NCU8 138 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 AP5M1Q9H0R1 490 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 NXF1Q9UBU9 619 aaKnown RBP15.18■□□□□ 0.02
CDH3-201ENST00000264012 PTPN22Q9Y2R2 807 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms