RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 NAP1L4Q99733 375 aaKnown RBP20.73■□□□□ 0.91
SDF4-201ENST00000263741 UNC45AQ9H3U1 944 aa20.73■□□□□ 0.91
SDF4-201ENST00000263741 MOXD2PA6NHM9 499 aa20.72■□□□□ 0.91
SDF4-201ENST00000263741 PSMD10O75832 226 aa20.72■□□□□ 0.91
SDF4-201ENST00000263741 VTI1AQ96AJ9 217 aa20.72■□□□□ 0.91
SDF4-201ENST00000263741 TSEN34Q9BSV6 310 aaKnown RBP20.72■□□□□ 0.91
SDF4-201ENST00000263741 ZEB2O60315 1214 aa20.71■□□□□ 0.91
SDF4-201ENST00000263741 MARCH6O60337 910 aa20.71■□□□□ 0.91
SDF4-201ENST00000263741 LGALS2P05162 132 aa20.71■□□□□ 0.91
SDF4-201ENST00000263741 TRAPPC10P48553 1259 aa20.71■□□□□ 0.91
SDF4-201ENST00000263741 BRAPQ7Z569 592 aa20.71■□□□□ 0.91
SDF4-201ENST00000263741 TEKT3Q9BXF9 490 aa20.71■□□□□ 0.91
SDF4-201ENST00000263741 STARD7Q9NQZ5 370 aa20.71■□□□□ 0.91
SDF4-201ENST00000263741 TBC1D22BQ9NU19 505 aa20.71■□□□□ 0.91
SDF4-201ENST00000263741 ELP1O95163 1332 aa20.71■□□□□ 0.91
SDF4-201ENST00000263741 HOXD8P13378 290 aaPredicted RBP20.71■□□□□ 0.91
SDF4-201ENST00000263741 RILPL1Q5EBL4 403 aa20.71■□□□□ 0.91
SDF4-201ENST00000263741 KAT2BQ92831 832 aa20.71■□□□□ 0.91
SDF4-201ENST00000263741 GLT1D1Q96MS3 346 aa20.71■□□□□ 0.91
SDF4-201ENST00000263741 POLR3EQ9NVU0 708 aa20.71■□□□□ 0.91
SDF4-201ENST00000263741 PCDH10Q9P2E7 1040 aa20.71■□□□□ 0.91
SDF4-201ENST00000263741 VAV3Q9UKW4 847 aa20.71■□□□□ 0.91
SDF4-201ENST00000263741 ZSCAN22P10073 491 aaPredicted RBP20.7■□□□□ 0.9
SDF4-201ENST00000263741 TXKP42681 527 aa20.7■□□□□ 0.9
SDF4-201ENST00000263741 RIT2Q99578 217 aa20.7■□□□□ 0.9
SDF4-201ENST00000263741 C16orf70Q9BSU1 422 aa20.7■□□□□ 0.9
SDF4-201ENST00000263741 MTG1Q9BT17 334 aaPredicted RBP20.7■□□□□ 0.9
SDF4-201ENST00000263741 SEPT1Q8WYJ6 367 aa20.69■□□□□ 0.9
SDF4-201ENST00000263741 MTMR9Q96QG7 549 aa20.69■□□□□ 0.9
SDF4-201ENST00000263741 PCYT2Q99447 389 aa20.69■□□□□ 0.9
SDF4-201ENST00000263741 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.69■□□□□ 0.9
SDF4-201ENST00000263741 SAMM50Q9Y512 469 aa20.69■□□□□ 0.9
SDF4-201ENST00000263741 GRIN2DO15399 1336 aa20.69■□□□□ 0.9
SDF4-201ENST00000263741 PPFIA4O75335 1185 aa20.69■□□□□ 0.9
SDF4-201ENST00000263741 F13A1P00488 732 aa20.69■□□□□ 0.9
SDF4-201ENST00000263741 MARK3P27448 753 aa20.69■□□□□ 0.9
SDF4-201ENST00000263741 PTGDRQ13258 359 aa20.69■□□□□ 0.9
SDF4-201ENST00000263741 LRRC26Q2I0M4 334 aa20.69■□□□□ 0.9
SDF4-201ENST00000263741 FAM20AQ96MK3 541 aa20.69■□□□□ 0.9
SDF4-201ENST00000263741 TCEAL9Q9UHQ7 104 aa20.69■□□□□ 0.9
SDF4-201ENST00000263741 ZDHHC9Q9Y397 364 aa20.69■□□□□ 0.9
SDF4-201ENST00000263741 F2P00734 622 aa20.68■□□□□ 0.9
SDF4-201ENST00000263741 OR52Z1P0C646 297 aa20.68■□□□□ 0.9
SDF4-201ENST00000263741 KRT76Q01546 638 aa20.68■□□□□ 0.9
SDF4-201ENST00000263741 CEBPZQ03701 1054 aaKnown RBP20.68■□□□□ 0.9
SDF4-201ENST00000263741 PDE4DIPQ5VU43 2346 aa20.68■□□□□ 0.9
SDF4-201ENST00000263741 CCDC60Q8IWA6 550 aaPredicted RBP20.68■□□□□ 0.9
SDF4-201ENST00000263741 EML1O00423 815 aa20.68■□□□□ 0.9
SDF4-201ENST00000263741 TBX3O15119 743 aa20.68■□□□□ 0.9
SDF4-201ENST00000263741 SUPT20HL2P0C7V6 817 aa20.68■□□□□ 0.9
SDF4-201ENST00000263741 ZNF746Q6NUN9 644 aaPredicted RBP20.68■□□□□ 0.9
SDF4-201ENST00000263741 C4orf32Q8N8J7 132 aa20.68■□□□□ 0.9
SDF4-201ENST00000263741 CHAMP1Q96JM3 812 aa20.68■□□□□ 0.9
SDF4-201ENST00000263741 TTC12Q9H892 705 aaPredicted RBP20.68■□□□□ 0.9
SDF4-201ENST00000263741 CEP290O15078 2479 aa20.68■□□□□ 0.9
SDF4-201ENST00000263741 POTEMA6NI47 508 aa20.67■□□□□ 0.9
SDF4-201ENST00000263741 BACH1O14867 736 aa20.67■□□□□ 0.9
SDF4-201ENST00000263741 SPIRE1Q08AE8 756 aa20.67■□□□□ 0.9
SDF4-201ENST00000263741 NCAPH2Q6IBW4 605 aa20.67■□□□□ 0.9
SDF4-201ENST00000263741 B3GNT9Q6UX72 402 aa20.67■□□□□ 0.9
SDF4-201ENST00000263741 ABHD15Q6UXT9 468 aa20.67■□□□□ 0.9
SDF4-201ENST00000263741 TRMT1LQ7Z2T5 733 aaKnown RBP20.67■□□□□ 0.9
SDF4-201ENST00000263741 GLG1Q92896 1179 aa20.67■□□□□ 0.9
SDF4-201ENST00000263741 CLIC4Q9Y696 253 aa20.67■□□□□ 0.9
SDF4-201ENST00000263741 ARID2Q68CP9 1835 aa20.67■□□□□ 0.9
SDF4-201ENST00000263741 H3BRB1 525 aa20.66■□□□□ 0.9
SDF4-201ENST00000263741 BAG4O95429 457 aaKnown RBP20.66■□□□□ 0.9
SDF4-201ENST00000263741 PSEN2P49810 448 aa20.66■□□□□ 0.9
SDF4-201ENST00000263741 ITGA7Q13683 1181 aa20.66■□□□□ 0.9
SDF4-201ENST00000263741 MFSD10Q14728 455 aa20.66■□□□□ 0.9
SDF4-201ENST00000263741 UGCGQ16739 394 aa20.66■□□□□ 0.9
SDF4-201ENST00000263741 KIAA0753Q2KHM9 967 aa20.66■□□□□ 0.9
SDF4-201ENST00000263741 NBPF20Q3BBV1 942 aa20.66■□□□□ 0.9
SDF4-201ENST00000263741 TRIM60Q495X7 471 aa20.66■□□□□ 0.9
SDF4-201ENST00000263741 FAM47CQ5HY64 1035 aa20.66■□□□□ 0.9
SDF4-201ENST00000263741 SLC39A5Q6ZMH5 540 aa20.66■□□□□ 0.9
SDF4-201ENST00000263741 MIER3Q7Z3K6 550 aa20.66■□□□□ 0.9
SDF4-201ENST00000263741 SLFN12Q8IYM2 578 aa20.66■□□□□ 0.9
SDF4-201ENST00000263741 TUT1Q9H6E5 874 aaKnown RBP20.66■□□□□ 0.9
SDF4-201ENST00000263741 DISC1Q9NRI5 854 aa20.66■□□□□ 0.9
SDF4-201ENST00000263741 EMSYQ7Z589 1322 aa20.66■□□□□ 0.9
SDF4-201ENST00000263741 WDR64B1ANS9 1081 aa20.66■□□□□ 0.9
SDF4-201ENST00000263741 KPNA6O60684 536 aa20.66■□□□□ 0.9
SDF4-201ENST00000263741 SF3A1Q15459 793 aaKnown RBP20.66■□□□□ 0.9
SDF4-201ENST00000263741 SWSAP1Q6NVH7 229 aa20.66■□□□□ 0.9
SDF4-201ENST00000263741 USP28Q96RU2 1077 aa20.66■□□□□ 0.9
SDF4-201ENST00000263741 ZSCAN16Q9H4T2 348 aaPredicted RBP20.66■□□□□ 0.9
SDF4-201ENST00000263741 PCDHA12Q9UN75 941 aa20.66■□□□□ 0.9
SDF4-201ENST00000263741 A0A0U1RQG5 324 aaPredicted RBP20.65■□□□□ 0.9
SDF4-201ENST00000263741 PQBP1O60828 265 aaKnown RBP20.65■□□□□ 0.9
SDF4-201ENST00000263741 ATG7O95352 703 aa20.65■□□□□ 0.9
SDF4-201ENST00000263741 BRD1O95696 1058 aa20.65■□□□□ 0.9
SDF4-201ENST00000263741 CAPN2P17655 700 aa20.65■□□□□ 0.9
SDF4-201ENST00000263741 TECP42680 631 aa20.65■□□□□ 0.9
SDF4-201ENST00000263741 PPP2R5CQ13362 524 aa20.65■□□□□ 0.9
SDF4-201ENST00000263741 ORC2Q13416 577 aaPredicted RBP20.65■□□□□ 0.9
SDF4-201ENST00000263741 MIS18BP1Q6P0N0 1132 aa20.65■□□□□ 0.9
SDF4-201ENST00000263741 ATP11BQ9Y2G3 1177 aa20.65■□□□□ 0.9
SDF4-201ENST00000263741 PCDHA10Q9Y5I2 948 aa20.65■□□□□ 0.9
SDF4-201ENST00000263741 EVPLQ92817 2033 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms