RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 LRRIQ4A6NIV6 560 aa13.88□□□□□ -0.19
TTC39A-202ENST00000262676 TRAPPC10P48553 1259 aa13.88□□□□□ -0.19
TTC39A-202ENST00000262676 ARHGEF18Q6ZSZ5 1173 aa13.88□□□□□ -0.19
TTC39A-202ENST00000262676 REXO1Q8N1G1 1221 aaKnown RBP13.88□□□□□ -0.19
TTC39A-202ENST00000262676 DEPDC1BQ8WUY9 529 aa13.88□□□□□ -0.19
TTC39A-202ENST00000262676 EXT2Q93063 718 aa13.88□□□□□ -0.19
TTC39A-202ENST00000262676 SLC39A2Q9NP94 309 aa13.88□□□□□ -0.19
TTC39A-202ENST00000262676 HESX1Q9UBX0 185 aa13.88□□□□□ -0.19
TTC39A-202ENST00000262676 PYGLP06737 847 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 SRGAP2BP0DMP2 458 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 TRIP13Q15645 432 aaPredicted RBP13.87□□□□□ -0.19
TTC39A-202ENST00000262676 KIF19Q2TAC6 998 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 TRIM67Q6ZTA4 783 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 NCLNQ969V3 563 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 JRKLQ9Y4A0 524 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 MAGI2Q86UL8 1455 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 PSMC1P62191 440 aaKnown RBP13.87□□□□□ -0.19
TTC39A-202ENST00000262676 HDLBPQ00341 1268 aaKnown RBP13.87□□□□□ -0.19
TTC39A-202ENST00000262676 THOC5Q13769 683 aaKnown RBP13.87□□□□□ -0.19
TTC39A-202ENST00000262676 PTPN21Q16825 1174 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 TTLL11Q8NHH1 800 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 CCDC127Q96BQ5 260 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 SERPINI1Q99574 410 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 NEUROG2Q9H2A3 272 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 TTC37Q6PGP7 1564 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 E9PMD0 336 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 MT-ND3P03897 115 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 PLS3P13797 630 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 POLGP54098 1239 aaPredicted RBP13.87□□□□□ -0.19
TTC39A-202ENST00000262676 TMC4Q7Z404 712 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 TBC1D1Q86TI0 1168 aaPredicted RBP13.87□□□□□ -0.19
TTC39A-202ENST00000262676 CCNYQ8ND76 341 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 PNMA1Q8ND90 353 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 NT5C3AQ9H0P0 336 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 A0A087WUV0 522 aaPredicted RBP13.87□□□□□ -0.19
TTC39A-202ENST00000262676 SNAP23O00161 211 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 CXCR5P32302 372 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 C1orf228Q6PIY5 440 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 KIAA2013Q8IYS2 634 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 DNAAF3Q8N9W5 541 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 TRIM15Q9C019 465 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 PNMA3Q9UL41 463 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 KLRF2D3W0D1 207 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 ZBTB7BO15156 539 aaPredicted RBP13.87□□□□□ -0.19
TTC39A-202ENST00000262676 CYP27B1O15528 508 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 RUNDC3BQ96NL0 473 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 KIAA1468Q9P260 1216 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 ARMCX3Q9UH62 379 aaPredicted RBP13.87□□□□□ -0.19
TTC39A-202ENST00000262676 SEPT9Q9UHD8 586 aaPredicted RBP13.87□□□□□ -0.19
TTC39A-202ENST00000262676 TLK1Q9UKI8 766 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 ZNF711Q9Y462 761 aa13.87□□□□□ -0.19
TTC39A-202ENST00000262676 SAMD9LQ8IVG5 1584 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 KRT14P02533 472 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 H2AFZP0C0S5 128 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 H2AFVQ71UI9 128 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 FANCLQ9NW38 375 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 PCDHB4Q9Y5E5 795 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 SPAG7O75391 227 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 NSFP46459 744 aaKnown RBP13.86□□□□□ -0.19
TTC39A-202ENST00000262676 NNTQ13423 1086 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 TRIM60Q495X7 471 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 PI16Q6UXB8 463 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 ENOX1Q8TC92 643 aaKnown RBP13.86□□□□□ -0.19
TTC39A-202ENST00000262676 KCNV2Q8TDN2 545 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 PAWRQ96IZ0 340 aaKnown RBP13.86□□□□□ -0.19
TTC39A-202ENST00000262676 KIFC3Q9BVG8 833 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 TRPV6Q9H1D0 765 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 ELP3Q9H9T3 547 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 BLMP54132 1417 aaPredicted RBP13.86□□□□□ -0.19
TTC39A-202ENST00000262676 TTI1O43156 1089 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 HEXIM1O94992 359 aaKnown RBP13.86□□□□□ -0.19
TTC39A-202ENST00000262676 CCDC92Q53HC0 331 aaPredicted RBP13.86□□□□□ -0.19
TTC39A-202ENST00000262676 DYNLL2Q96FJ2 89 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 ADPGKQ9BRR6 497 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 CCDC90BQ9GZT6 254 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 COG4Q9H9E3 785 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 H0Y3Z8 333 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 MOCS3O95396 460 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 HOXD10P28358 340 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 OCRLQ01968 901 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 SZRD1Q7Z422 152 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 PLA2G4DQ86XP0 818 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 SMYD3Q9H7B4 428 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 DDX28Q9NUL7 540 aaKnown RBP13.86□□□□□ -0.19
TTC39A-202ENST00000262676 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.86□□□□□ -0.19
TTC39A-202ENST00000262676 NOVA2Q9UNW9 492 aaKnown RBP13.86□□□□□ -0.19
TTC39A-202ENST00000262676 EPN1Q9Y6I3 576 aaPredicted RBP13.86□□□□□ -0.19
TTC39A-202ENST00000262676 ANKARQ7Z5J8 1434 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 SGO2Q562F6 1265 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 GIPC2Q8TF65 315 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 ZBTB40Q9NUA8 1239 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 NARFQ9UHQ1 456 aa13.86□□□□□ -0.19
TTC39A-202ENST00000262676 USP6P35125 1406 aa13.85□□□□□ -0.19
TTC39A-202ENST00000262676 BASP1P80723 227 aaKnown RBP13.85□□□□□ -0.19
TTC39A-202ENST00000262676 MYL7Q01449 175 aa13.85□□□□□ -0.19
TTC39A-202ENST00000262676 ARMCX5Q6P1M9 558 aa13.85□□□□□ -0.19
TTC39A-202ENST00000262676 ZBTB8OSQ8IWT0 167 aa13.85□□□□□ -0.19
TTC39A-202ENST00000262676 ZSCAN10Q96SZ4 725 aaPredicted RBP13.85□□□□□ -0.19
TTC39A-202ENST00000262676 TUBB6Q9BUF5 446 aa13.85□□□□□ -0.19
TTC39A-202ENST00000262676 FAM49AQ9H0Q0 323 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms