RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 BRD2P25440 801 aaKnown RBP13.43□□□□□ -0.26
USP30-201ENST00000257548 GNAQP50148 359 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 TAOK1Q7L7X3 1001 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 LRRC34Q8IZ02 419 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 TAB3Q8N5C8 712 aaPredicted RBP13.43□□□□□ -0.26
USP30-201ENST00000257548 CALR3Q96L12 384 aaKnown RBP13.43□□□□□ -0.26
USP30-201ENST00000257548 ECT2Q9H8V3 914 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 HOMER3Q9NSC5 361 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 PANK4Q9NVE7 773 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 ABCC12Q96J65 1359 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 PPP1R12AO14974 1030 aaPredicted RBP13.42□□□□□ -0.26
USP30-201ENST00000257548 SHOX2O60902 331 aaPredicted RBP13.42□□□□□ -0.26
USP30-201ENST00000257548 CAND2O75155 1236 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 CDC37Q16543 378 aaPredicted RBP13.42□□□□□ -0.26
USP30-201ENST00000257548 USP17L2Q6R6M4 530 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 MAPKAPK5Q8IW41 473 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 SYCP3Q8IZU3 236 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 DDX12PQ92771 950 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 XPO6Q96QU8 1125 aaKnown RBP13.42□□□□□ -0.26
USP30-201ENST00000257548 FGFR1OP2Q9NVK5 253 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 ARMCX3Q9UH62 379 aaPredicted RBP13.42□□□□□ -0.26
USP30-201ENST00000257548 CCT8L1PA6NM43 557 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 G3V3G9 751 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 RASGRF2O14827 1237 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 TNFAIP3P21580 790 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 ERVK-9P63128 1117 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 BIRC3Q13489 604 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 DCAF8Q5TAQ9 597 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 SMIM5Q71RC9 77 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 NEK8Q86SG6 692 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 CCDC65Q8IXS2 484 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 SLC44A5Q8NCS7 719 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.42□□□□□ -0.26
USP30-201ENST00000257548 TSC22D3Q99576 134 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 OSBPL7Q9BZF2 842 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 TMOD4Q9NZQ9 345 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 RNF14Q9UBS8 474 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 COL4A3BPQ9Y5P4 624 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 XRN1Q8IZH2 1706 aaKnown RBP13.42□□□□□ -0.26
USP30-201ENST00000257548 TRAPPC10P48553 1259 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 PICALMQ13492 652 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 CRYMQ14894 314 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 PKN1Q16512 942 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 PPP4R3AQ6IN85 833 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 RFX8Q6ZV50 586 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 NLRP10Q86W26 655 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 GIMAP8Q8ND71 665 aaPredicted RBP13.42□□□□□ -0.26
USP30-201ENST00000257548 ACSBG1Q96GR2 724 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 OSBPL1AQ9BXW6 950 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 STMN4Q9H169 189 aaPredicted RBP13.42□□□□□ -0.26
USP30-201ENST00000257548 ATP6V0A2Q9Y487 856 aa13.42□□□□□ -0.26
USP30-201ENST00000257548 TCP11X1B4DZS4 312 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 IGF2BP3O00425 579 aaKnown RBP eCLIP13.41□□□□□ -0.26
USP30-201ENST00000257548 TBCAO75347 108 aaKnown RBP13.41□□□□□ -0.26
USP30-201ENST00000257548 GBP1P32455 592 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 PSEN1P49768 467 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 SKOR1P84550 965 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 DR1Q01658 176 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 CYP4A11Q02928 519 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 CUL1Q13616 776 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 MESDQ14696 234 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 EXOC3L4Q17RC7 722 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 GSTA5Q7RTV2 222 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 MSL3Q8N5Y2 521 aaKnown RBP13.41□□□□□ -0.26
USP30-201ENST00000257548 SPDYE1Q8NFV5 336 aaPredicted RBP13.41□□□□□ -0.26
USP30-201ENST00000257548 KIAA1024Q9UPX6 916 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 USH1CQ9Y6N9 552 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 FAM208AQ9UK61 1670 aaKnown RBP13.41□□□□□ -0.26
USP30-201ENST00000257548 F8W031 263 aaPredicted RBP13.41□□□□□ -0.26
USP30-201ENST00000257548 MEIS1O00470 390 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 AP1G2O75843 785 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 XRCC5P13010 732 aaKnown RBP13.41□□□□□ -0.26
USP30-201ENST00000257548 CYP4F22Q6NT55 531 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 GPBP1Q86WP2 473 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 COA7Q96BR5 231 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 G3BP2Q9UN86 482 aaKnown RBP13.41□□□□□ -0.26
USP30-201ENST00000257548 CASP7P55210 303 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 KCNQ4P56696 695 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 EAPPQ56P03 285 aaPredicted RBP13.41□□□□□ -0.26
USP30-201ENST00000257548 HP1BP3Q5SSJ5 553 aaPredicted RBP13.41□□□□□ -0.26
USP30-201ENST00000257548 ARL6IP4Q66PJ3 421 aaKnown RBP13.41□□□□□ -0.26
USP30-201ENST00000257548 TRPM8Q7Z2W7 1104 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 PHLDB2Q86SQ0 1253 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 USP38Q8NB14 1042 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 ZBTB1Q9Y2K1 713 aa13.41□□□□□ -0.26
USP30-201ENST00000257548 NKRFO15226 690 aaKnown RBP eCLIP13.4□□□□□ -0.26
USP30-201ENST00000257548 ATP6V1G2O95670 118 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 KRT15P19012 456 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 STAT1P42224 750 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 CCNHP51946 323 aaPredicted RBP13.4□□□□□ -0.26
USP30-201ENST00000257548 CHRNDQ07001 517 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 UAP1Q16222 522 aaPredicted RBP13.4□□□□□ -0.26
USP30-201ENST00000257548 TBC1D10BQ4KMP7 808 aaPredicted RBP13.4□□□□□ -0.26
USP30-201ENST00000257548 RASIP1Q5U651 963 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 PDXDC1Q6P996 788 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 IQCKQ8N0W5 287 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 SPATA20Q8TB22 786 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 TGFBRAP1Q8WUH2 860 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 DUSP9Q99956 384 aaKnown RBP13.4□□□□□ -0.26
USP30-201ENST00000257548 TMBIM4Q9HC24 238 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms