RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 TBC1D9BQ66K14 1250 aa14.72□□□□□ -0.05
H3F3B-201ENST00000254810 SCFD2Q8WU76 684 aa14.72□□□□□ -0.05
H3F3B-201ENST00000254810 ZKSCAN4Q969J2 545 aaPredicted RBP14.72□□□□□ -0.05
H3F3B-201ENST00000254810 GPR101Q96P66 508 aaPredicted RBP14.72□□□□□ -0.05
H3F3B-201ENST00000254810 TSG101Q99816 390 aa14.72□□□□□ -0.05
H3F3B-201ENST00000254810 OSBPL7Q9BZF2 842 aa14.72□□□□□ -0.05
H3F3B-201ENST00000254810 FAM170AA1A519 330 aa14.71□□□□□ -0.05
H3F3B-201ENST00000254810 DNM1LO00429 736 aa14.71□□□□□ -0.05
H3F3B-201ENST00000254810 KIF4AO95239 1232 aa14.71□□□□□ -0.05
H3F3B-201ENST00000254810 C1orf131Q8NDD1 294 aaKnown RBP14.71□□□□□ -0.05
H3F3B-201ENST00000254810 CEP95Q96GE4 821 aa14.71□□□□□ -0.05
H3F3B-201ENST00000254810 RIC8AQ9NPQ8 531 aa14.71□□□□□ -0.05
H3F3B-201ENST00000254810 PCDHA2Q9Y5H9 948 aa14.71□□□□□ -0.05
H3F3B-201ENST00000254810 BHMG1C9JSJ3 638 aaPredicted RBP14.71□□□□□ -0.06
H3F3B-201ENST00000254810 CEP104O60308 925 aa14.71□□□□□ -0.06
H3F3B-201ENST00000254810 SSBP05455 408 aaKnown RBP eCLIP14.71□□□□□ -0.06
H3F3B-201ENST00000254810 UBE2SQ16763 222 aa14.71□□□□□ -0.06
H3F3B-201ENST00000254810 SPATS2Q86XZ4 545 aaKnown RBP14.71□□□□□ -0.06
H3F3B-201ENST00000254810 LRRC57Q8N9N7 239 aa14.71□□□□□ -0.06
H3F3B-201ENST00000254810 HAS1Q92839 578 aa14.71□□□□□ -0.06
H3F3B-201ENST00000254810 EYA3Q99504 573 aa14.71□□□□□ -0.06
H3F3B-201ENST00000254810 LZTS2Q9BRK4 669 aa14.71□□□□□ -0.06
H3F3B-201ENST00000254810 CXorf56Q9H5V9 222 aa14.71□□□□□ -0.06
H3F3B-201ENST00000254810 SLC40A1Q9NP59 571 aa14.71□□□□□ -0.06
H3F3B-201ENST00000254810 PANK4Q9NVE7 773 aa14.71□□□□□ -0.06
H3F3B-201ENST00000254810 AIPL1Q9NZN9 384 aa14.71□□□□□ -0.06
H3F3B-201ENST00000254810 BCCIPQ9P287 314 aaKnown RBP eCLIP14.71□□□□□ -0.06
H3F3B-201ENST00000254810 FBXL5Q9UKA1 691 aa14.71□□□□□ -0.06
H3F3B-201ENST00000254810 AJAP1Q9UKB5 411 aaPredicted RBP14.71□□□□□ -0.06
H3F3B-201ENST00000254810 DDX60LQ5H9U9 1706 aaKnown RBP14.7□□□□□ -0.06
H3F3B-201ENST00000254810 E9PMD0 336 aa14.7□□□□□ -0.06
H3F3B-201ENST00000254810 SLC9A1P19634 815 aa14.7□□□□□ -0.06
H3F3B-201ENST00000254810 MAP2K2P36507 400 aa14.7□□□□□ -0.06
H3F3B-201ENST00000254810 CDK8P49336 464 aa14.7□□□□□ -0.06
H3F3B-201ENST00000254810 TNNC1P63316 161 aa14.7□□□□□ -0.06
H3F3B-201ENST00000254810 DDR1Q08345 913 aa14.7□□□□□ -0.06
H3F3B-201ENST00000254810 RPS6KA1Q15418 735 aa14.7□□□□□ -0.06
H3F3B-201ENST00000254810 FAM26FQ5R3K3 315 aa14.7□□□□□ -0.06
H3F3B-201ENST00000254810 PPP4R3AQ6IN85 833 aa14.7□□□□□ -0.06
H3F3B-201ENST00000254810 IRF2BP2Q7Z5L9 587 aa14.7□□□□□ -0.06
H3F3B-201ENST00000254810 PROM2Q8N271 834 aa14.7□□□□□ -0.06
H3F3B-201ENST00000254810 KLC4Q9NSK0 619 aa14.7□□□□□ -0.06
H3F3B-201ENST00000254810 SEC63Q9UGP8 760 aaKnown RBP14.7□□□□□ -0.06
H3F3B-201ENST00000254810 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.7□□□□□ -0.06
H3F3B-201ENST00000254810 SART1O43290 800 aaKnown RBP14.7□□□□□ -0.06
H3F3B-201ENST00000254810 IBSPP21815 317 aaPredicted RBP14.7□□□□□ -0.06
H3F3B-201ENST00000254810 CTNNA1P35221 906 aaKnown RBP14.7□□□□□ -0.06
H3F3B-201ENST00000254810 ASIC2Q16515 512 aa14.7□□□□□ -0.06
H3F3B-201ENST00000254810 CLEC10AQ8IUN9 316 aa14.7□□□□□ -0.06
H3F3B-201ENST00000254810 METTL13Q8N6R0 699 aa14.7□□□□□ -0.06
H3F3B-201ENST00000254810 SCFD1Q8WVM8 642 aa14.7□□□□□ -0.06
H3F3B-201ENST00000254810 ROBO1Q9Y6N7 1651 aa14.7□□□□□ -0.06
H3F3B-201ENST00000254810 NAV1Q8NEY1 1877 aa14.69□□□□□ -0.06
H3F3B-201ENST00000254810 GCOM1H8Y6P7 765 aaPredicted RBP14.69□□□□□ -0.06
H3F3B-201ENST00000254810 DAPK3O43293 454 aa14.69□□□□□ -0.06
H3F3B-201ENST00000254810 TRAPPC3O43617 180 aa14.69□□□□□ -0.06
H3F3B-201ENST00000254810 CLSTN1O94985 981 aa14.69□□□□□ -0.06
H3F3B-201ENST00000254810 LDHBP07195 334 aaKnown RBP14.69□□□□□ -0.06
H3F3B-201ENST00000254810 MYZAPP0CAP1 466 aa14.69□□□□□ -0.06
H3F3B-201ENST00000254810 USP11P51784 963 aa14.69□□□□□ -0.06
H3F3B-201ENST00000254810 KRT79Q5XKE5 535 aa14.69□□□□□ -0.06
H3F3B-201ENST00000254810 MICALCLQ6ZW33 695 aa14.69□□□□□ -0.06
H3F3B-201ENST00000254810 RBM46Q8TBY0 533 aaKnown RBP14.69□□□□□ -0.06
H3F3B-201ENST00000254810 CELF4Q9BZC1 486 aaKnown RBP14.69□□□□□ -0.06
H3F3B-201ENST00000254810 KCTD10Q9H3F6 313 aa14.69□□□□□ -0.06
H3F3B-201ENST00000254810 AMACRQ9UHK6 382 aa14.69□□□□□ -0.06
H3F3B-201ENST00000254810 NOC2LQ9Y3T9 749 aaKnown RBP14.69□□□□□ -0.06
H3F3B-201ENST00000254810 GMNCA6NCL1 334 aa14.69□□□□□ -0.06
H3F3B-201ENST00000254810 USP8P40818 1118 aa14.69□□□□□ -0.06
H3F3B-201ENST00000254810 TNNI2P48788 182 aa14.69□□□□□ -0.06
H3F3B-201ENST00000254810 CASP5P51878 434 aa14.69□□□□□ -0.06
H3F3B-201ENST00000254810 SMTNP53814 917 aa14.69□□□□□ -0.06
H3F3B-201ENST00000254810 LRIG3Q6UXM1 1119 aa14.69□□□□□ -0.06
H3F3B-201ENST00000254810 FAM228AQ86W67 206 aa14.69□□□□□ -0.06
H3F3B-201ENST00000254810 ZNF652Q9Y2D9 606 aa14.69□□□□□ -0.06
H3F3B-201ENST00000254810 LEMD3Q9Y2U8 911 aa14.69□□□□□ -0.06
H3F3B-201ENST00000254810 KCNQ2O43526 872 aa14.68□□□□□ -0.06
H3F3B-201ENST00000254810 PDHBP11177 359 aa14.68□□□□□ -0.06
H3F3B-201ENST00000254810 KCNH2Q12809 1159 aa14.68□□□□□ -0.06
H3F3B-201ENST00000254810 PSMD2Q13200 908 aa14.68□□□□□ -0.06
H3F3B-201ENST00000254810 TMEM266Q2M3C6 531 aa14.68□□□□□ -0.06
H3F3B-201ENST00000254810 UBLCP1Q8WVY7 318 aaPredicted RBP14.68□□□□□ -0.06
H3F3B-201ENST00000254810 RAPGEF5Q92565 580 aa14.68□□□□□ -0.06
H3F3B-201ENST00000254810 TAF4BQ92750 862 aa14.68□□□□□ -0.06
H3F3B-201ENST00000254810 NOVA2Q9UNW9 492 aaKnown RBP14.68□□□□□ -0.06
H3F3B-201ENST00000254810 NR2E1Q9Y466 385 aa14.68□□□□□ -0.06
H3F3B-201ENST00000254810 PPP1R11O60927 126 aaPredicted RBP14.68□□□□□ -0.06
H3F3B-201ENST00000254810 PDIA5Q14554 519 aa14.68□□□□□ -0.06
H3F3B-201ENST00000254810 MARCH10Q8NA82 808 aaPredicted RBP14.68□□□□□ -0.06
H3F3B-201ENST00000254810 LINC00116Q8NCU8 138 aa14.68□□□□□ -0.06
H3F3B-201ENST00000254810 NUCKS1Q9H1E3 243 aaKnown RBP14.68□□□□□ -0.06
H3F3B-201ENST00000254810 BCAS3Q9H6U6 928 aa14.68□□□□□ -0.06
H3F3B-201ENST00000254810 HAUS2Q9NVX0 235 aa14.68□□□□□ -0.06
H3F3B-201ENST00000254810 PHF20L1A8MW92 1017 aa14.67□□□□□ -0.06
H3F3B-201ENST00000254810 TTI1O43156 1089 aa14.67□□□□□ -0.06
H3F3B-201ENST00000254810 NEDD1Q8NHV4 660 aa14.67□□□□□ -0.06
H3F3B-201ENST00000254810 MDM1Q8TC05 714 aa14.67□□□□□ -0.06
H3F3B-201ENST00000254810 ACTRT1Q8TDG2 376 aa14.67□□□□□ -0.06
H3F3B-201ENST00000254810 RIOX1Q9H6W3 641 aa14.67□□□□□ -0.06
H3F3B-201ENST00000254810 ESYT2A0FGR8 921 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms