RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 TRIM10Q9UDY6 481 aa16.34■□□□□ 0.21
MBD4-201ENST00000249910 DDX39AO00148 427 aaKnown RBP16.33■□□□□ 0.2
MBD4-201ENST00000249910 FECHP22830 423 aa16.33■□□□□ 0.2
MBD4-201ENST00000249910 CASQ1P31415 396 aa16.33■□□□□ 0.2
MBD4-201ENST00000249910 ZNF280AP59817 542 aaPredicted RBP16.33■□□□□ 0.2
MBD4-201ENST00000249910 LRRC63Q05C16 580 aa16.33■□□□□ 0.2
MBD4-201ENST00000249910 KIF4BQ2VIQ3 1234 aa16.33■□□□□ 0.2
MBD4-201ENST00000249910 VWA3BQ502W6 1294 aa16.33■□□□□ 0.2
MBD4-201ENST00000249910 MCTP2Q6DN12 878 aa16.33■□□□□ 0.2
MBD4-201ENST00000249910 NLGN2Q8NFZ4 835 aa16.33■□□□□ 0.2
MBD4-201ENST00000249910 HOOK2Q96ED9 719 aa16.33■□□□□ 0.2
MBD4-201ENST00000249910 RUSC1Q9BVN2 902 aa16.33■□□□□ 0.2
MBD4-201ENST00000249910 GOLGA6L9A6NEM1 432 aa16.33■□□□□ 0.2
MBD4-201ENST00000249910 SLITRK3O94933 977 aa16.33■□□□□ 0.2
MBD4-201ENST00000249910 ALAS1P13196 640 aa16.33■□□□□ 0.2
MBD4-201ENST00000249910 ZCWPW2Q504Y3 356 aa16.33■□□□□ 0.2
MBD4-201ENST00000249910 TAF3Q5VWG9 929 aa16.33■□□□□ 0.2
MBD4-201ENST00000249910 TRMT1LQ7Z2T5 733 aaKnown RBP16.33■□□□□ 0.2
MBD4-201ENST00000249910 FAM160B2Q86V87 743 aa16.33■□□□□ 0.2
MBD4-201ENST00000249910 PDCL2Q8N4E4 241 aa16.33■□□□□ 0.2
MBD4-201ENST00000249910 SYT2Q8N9I0 419 aaPredicted RBP16.33■□□□□ 0.2
MBD4-201ENST00000249910 CNKSR2Q8WXI2 1034 aa16.33■□□□□ 0.2
MBD4-201ENST00000249910 DNAJC7Q99615 494 aa16.33■□□□□ 0.2
MBD4-201ENST00000249910 MMRN2Q9H8L6 949 aa16.33■□□□□ 0.2
MBD4-201ENST00000249910 EPN1Q9Y6I3 576 aaPredicted RBP16.33■□□□□ 0.2
MBD4-201ENST00000249910 FLOT1O75955 427 aa16.32■□□□□ 0.2
MBD4-201ENST00000249910 KCNA1Q09470 495 aa16.32■□□□□ 0.2
MBD4-201ENST00000249910 SPP2Q13103 211 aa16.32■□□□□ 0.2
MBD4-201ENST00000249910 TNFAIP1Q13829 316 aa16.32■□□□□ 0.2
MBD4-201ENST00000249910 ARHGAP29Q52LW3 1261 aa16.32■□□□□ 0.2
MBD4-201ENST00000249910 FKBP15Q5T1M5 1219 aa16.32■□□□□ 0.2
MBD4-201ENST00000249910 SFR1Q86XK3 245 aa16.32■□□□□ 0.2
MBD4-201ENST00000249910 PRPF38AQ8NAV1 312 aaKnown RBP16.32■□□□□ 0.2
MBD4-201ENST00000249910 IL31RAQ8NI17 732 aa16.32■□□□□ 0.2
MBD4-201ENST00000249910 SMCR8Q8TEV9 937 aaPredicted RBP16.32■□□□□ 0.2
MBD4-201ENST00000249910 DYDC2Q96IM9 177 aa16.32■□□□□ 0.2
MBD4-201ENST00000249910 WNK4Q96J92 1243 aa16.32■□□□□ 0.2
MBD4-201ENST00000249910 PURBQ96QR8 312 aaKnown RBP16.32■□□□□ 0.2
MBD4-201ENST00000249910 HSD17B14Q9BPX1 270 aa16.32■□□□□ 0.2
MBD4-201ENST00000249910 GTPBP4Q9BZE4 634 aaKnown RBP16.32■□□□□ 0.2
MBD4-201ENST00000249910 WRAP73Q9P2S5 460 aaPredicted RBP16.32■□□□□ 0.2
MBD4-201ENST00000249910 REXO2Q9Y3B8 237 aaKnown RBP16.32■□□□□ 0.2
MBD4-201ENST00000249910 GAS7O60861 476 aa16.31■□□□□ 0.2
MBD4-201ENST00000249910 PSMD10O75832 226 aa16.31■□□□□ 0.2
MBD4-201ENST00000249910 NDUFA10O95299 355 aa16.31■□□□□ 0.2
MBD4-201ENST00000249910 TFRCP02786 760 aaKnown RBP16.31■□□□□ 0.2
MBD4-201ENST00000249910 TUBB4AP04350 444 aa16.31■□□□□ 0.2
MBD4-201ENST00000249910 IRX3P78415 501 aaPredicted RBP16.31■□□□□ 0.2
MBD4-201ENST00000249910 FKBP3Q00688 224 aaKnown RBP16.31■□□□□ 0.2
MBD4-201ENST00000249910 ZNF569Q5MCW4 686 aa16.31■□□□□ 0.2
MBD4-201ENST00000249910 ERO1AQ96HE7 468 aa16.31■□□□□ 0.2
MBD4-201ENST00000249910 CARD6Q9BX69 1037 aa16.31■□□□□ 0.2
MBD4-201ENST00000249910 IKZF4Q9H2S9 585 aa16.31■□□□□ 0.2
MBD4-201ENST00000249910 ICAM1P05362 532 aa16.31■□□□□ 0.2
MBD4-201ENST00000249910 PLEKP08567 350 aaPredicted RBP16.31■□□□□ 0.2
MBD4-201ENST00000249910 ITGB5P18084 799 aa16.31■□□□□ 0.2
MBD4-201ENST00000249910 APBA1Q02410 837 aa16.31■□□□□ 0.2
MBD4-201ENST00000249910 TSR1Q2NL82 804 aaKnown RBP16.31■□□□□ 0.2
MBD4-201ENST00000249910 MUM1L1Q5H9M0 696 aa16.31■□□□□ 0.2
MBD4-201ENST00000249910 ERGIC2Q96RQ1 377 aa16.31■□□□□ 0.2
MBD4-201ENST00000249910 TSG101Q99816 390 aa16.31■□□□□ 0.2
MBD4-201ENST00000249910 ZNF577Q9BSK1 485 aa16.31■□□□□ 0.2
MBD4-201ENST00000249910 CRACR2AQ9BSW2 395 aa16.31■□□□□ 0.2
MBD4-201ENST00000249910 RABGAP1Q9Y3P9 1069 aa16.31■□□□□ 0.2
MBD4-201ENST00000249910 PRPF6O94906 941 aaKnown RBP16.3■□□□□ 0.2
MBD4-201ENST00000249910 VCAM1P19320 739 aa16.3■□□□□ 0.2
MBD4-201ENST00000249910 MAN2A1Q16706 1144 aa16.3■□□□□ 0.2
MBD4-201ENST00000249910 WDR11Q9BZH6 1224 aa16.3■□□□□ 0.2
MBD4-201ENST00000249910 KCTD10Q9H3F6 313 aa16.3■□□□□ 0.2
MBD4-201ENST00000249910 ZNF541Q9H0D2 1346 aa16.3■□□□□ 0.2
MBD4-201ENST00000249910 FRMD3A2A2Y4 597 aa16.3■□□□□ 0.2
MBD4-201ENST00000249910 MYBP10242 640 aa16.3■□□□□ 0.2
MBD4-201ENST00000249910 DLK2Q6UY11 383 aa16.3■□□□□ 0.2
MBD4-201ENST00000249910 EPC1Q9H2F5 836 aa16.3■□□□□ 0.2
MBD4-201ENST00000249910 GUCA1BQ9UMX6 200 aa16.3■□□□□ 0.2
MBD4-201ENST00000249910 IPO5O00410 1097 aaKnown RBP16.29■□□□□ 0.2
MBD4-201ENST00000249910 PLA2G6O60733 806 aa16.29■□□□□ 0.2
MBD4-201ENST00000249910 HOXD13P35453 343 aa16.29■□□□□ 0.2
MBD4-201ENST00000249910 ARHGAP25P42331 645 aa16.29■□□□□ 0.2
MBD4-201ENST00000249910 CYP27A1Q02318 531 aa16.29■□□□□ 0.2
MBD4-201ENST00000249910 TRAF1Q13077 416 aa16.29■□□□□ 0.2
MBD4-201ENST00000249910 ADAM9Q13443 819 aa16.29■□□□□ 0.2
MBD4-201ENST00000249910 PRKG1Q13976 671 aa16.29■□□□□ 0.2
MBD4-201ENST00000249910 CCDC40Q4G0X9 1142 aa16.29■□□□□ 0.2
MBD4-201ENST00000249910 ANGEL2Q5VTE6 544 aaKnown RBP16.29■□□□□ 0.2
MBD4-201ENST00000249910 CLEC4DQ8WXI8 215 aa16.29■□□□□ 0.2
MBD4-201ENST00000249910 SH2D3AQ9BRG2 576 aa16.29■□□□□ 0.2
MBD4-201ENST00000249910 UNC45AQ9H3U1 944 aa16.29■□□□□ 0.2
MBD4-201ENST00000249910 ZSWIM4Q9H7M6 989 aa16.29■□□□□ 0.2
MBD4-201ENST00000249910 SIK3Q9Y2K2 1263 aa16.29■□□□□ 0.2
MBD4-201ENST00000249910 COL4A3BPQ9Y5P4 624 aa16.29■□□□□ 0.2
MBD4-201ENST00000249910 FZD9O00144 591 aa16.29■□□□□ 0.2
MBD4-201ENST00000249910 KIF5CO60282 957 aa16.29■□□□□ 0.2
MBD4-201ENST00000249910 CTNND1O60716 968 aaKnown RBP16.29■□□□□ 0.2
MBD4-201ENST00000249910 RINT1Q6NUQ1 792 aa16.29■□□□□ 0.2
MBD4-201ENST00000249910 BANK1Q8NDB2 785 aa16.29■□□□□ 0.2
MBD4-201ENST00000249910 PITPNM2Q9BZ72 1349 aa16.28■□□□□ 0.2
MBD4-201ENST00000249910 FGFR1OPO95684 399 aaKnown RBP16.28■□□□□ 0.2
MBD4-201ENST00000249910 RPS12P25398 132 aaKnown RBP16.28■□□□□ 0.2
MBD4-201ENST00000249910 ZBED6P86452 979 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms