RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 KRT26Q7Z3Y9 468 aa23.98■■□□□ 1.43
CLN6-201ENST00000249806 DUSP10Q9Y6W6 482 aa23.98■■□□□ 1.43
CLN6-201ENST00000249806 KIF13BQ9NQT8 1826 aa23.97■■□□□ 1.43
CLN6-201ENST00000249806 ZNF263O14978 683 aa23.97■■□□□ 1.43
CLN6-201ENST00000249806 CHMP2AO43633 222 aa23.97■■□□□ 1.43
CLN6-201ENST00000249806 HNRNPH3P31942 346 aaKnown RBP23.97■■□□□ 1.43
CLN6-201ENST00000249806 CHMP4BP1P59074 171 aa23.97■■□□□ 1.43
CLN6-201ENST00000249806 CDK17Q00537 523 aa23.97■■□□□ 1.43
CLN6-201ENST00000249806 ADAM9Q13443 819 aa23.97■■□□□ 1.43
CLN6-201ENST00000249806 CTTNQ14247 550 aaKnown RBP23.97■■□□□ 1.43
CLN6-201ENST00000249806 RRAGAQ7L523 313 aa23.97■■□□□ 1.43
CLN6-201ENST00000249806 SFR1Q86XK3 245 aa23.97■■□□□ 1.43
CLN6-201ENST00000249806 GPR161Q8N6U8 529 aaKnown RBP23.97■■□□□ 1.43
CLN6-201ENST00000249806 GOLGA1Q92805 767 aa23.97■■□□□ 1.43
CLN6-201ENST00000249806 IQCDQ96DY2 449 aa23.97■■□□□ 1.43
CLN6-201ENST00000249806 ZBED3Q96IU2 234 aaPredicted RBP23.97■■□□□ 1.43
CLN6-201ENST00000249806 CCDC42Q96M95 316 aa23.97■■□□□ 1.43
CLN6-201ENST00000249806 CEP63Q96MT8 703 aa23.97■■□□□ 1.43
CLN6-201ENST00000249806 LRRC53A6NM62 1247 aa23.96■■□□□ 1.43
CLN6-201ENST00000249806 ENC1O14682 589 aa23.96■■□□□ 1.43
CLN6-201ENST00000249806 BAG6P46379 1132 aa23.96■■□□□ 1.43
CLN6-201ENST00000249806 LDHDQ86WU2 507 aa23.96■■□□□ 1.43
CLN6-201ENST00000249806 PIGOQ8TEQ8 1089 aa23.96■■□□□ 1.43
CLN6-201ENST00000249806 JAKMIP2Q96AA8 810 aa23.96■■□□□ 1.43
CLN6-201ENST00000249806 POLR3CQ9BUI4 534 aaPredicted RBP23.96■■□□□ 1.43
CLN6-201ENST00000249806 RUSC1Q9BVN2 902 aa23.96■■□□□ 1.43
CLN6-201ENST00000249806 VPS33BQ9H267 617 aa23.96■■□□□ 1.43
CLN6-201ENST00000249806 LRCH2Q5VUJ6 765 aa23.96■■□□□ 1.43
CLN6-201ENST00000249806 MYOZ2Q9NPC6 264 aa23.96■■□□□ 1.43
CLN6-201ENST00000249806 MRPL11Q9Y3B7 192 aaKnown RBP23.96■■□□□ 1.43
CLN6-201ENST00000249806 ZBTB39O15060 712 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 PSMD10O75832 226 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 IPO7O95373 1038 aaKnown RBP23.95■■□□□ 1.42
CLN6-201ENST00000249806 EGFRP00533 1210 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 HOXD13P35453 343 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 SF3B2Q13435 895 aaKnown RBP23.95■■□□□ 1.42
CLN6-201ENST00000249806 TPH2Q8IWU9 490 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 BAP1Q92560 729 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 RABGGTAQ92696 567 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 HSD17B14Q9BPX1 270 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 FEM1BQ9UK73 627 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 RABGAP1Q9Y3P9 1069 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 STK24Q9Y6E0 443 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 SLITRK3O94933 977 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 KIF20AO95235 890 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 ASNSP08243 561 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 INPP5BP32019 993 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 FAM160B2Q86V87 743 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 TRIM59Q8IWR1 403 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 CEP112Q8N8E3 955 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 NEK11Q8NG66 645 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 AGBL1Q96MI9 1066 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 CRACR2AQ9BSW2 395 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 PARD6BQ9BYG5 372 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 SH2D4AQ9H788 454 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 ARGLU1Q9NWB6 273 aaPredicted RBP23.95■■□□□ 1.42
CLN6-201ENST00000249806 PIM2Q9P1W9 311 aa23.95■■□□□ 1.42
CLN6-201ENST00000249806 SFI1A8K8P3 1242 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 KRT86O43790 486 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 PLA2G6O60733 806 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 PRPF6O94906 941 aaKnown RBP23.94■■□□□ 1.42
CLN6-201ENST00000249806 MYBP10242 640 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 POLD1P28340 1107 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 AMPD2Q01433 879 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 MAP3K10Q02779 954 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 RASA3Q14644 834 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 ZNF341Q9BYN7 854 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 HDAC6Q9UBN7 1215 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 MYO6Q9UM54 1294 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.94■■□□□ 1.42
CLN6-201ENST00000249806 EYA4O95677 639 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 GNA14O95837 355 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 APBA1Q02410 837 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 TUBB2AQ13885 445 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 CIAPIN1Q6FI81 312 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 ZNF662Q6ZS27 426 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 DYDC2Q96IM9 177 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 TUBB2BQ9BVA1 445 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 NLRC4Q9NPP4 1024 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 PRDM10Q9NQV6 1147 aa23.94■■□□□ 1.42
CLN6-201ENST00000249806 SEC31AO94979 1220 aaKnown RBP23.93■■□□□ 1.42
CLN6-201ENST00000249806 ARP10275 920 aa23.93■■□□□ 1.42
CLN6-201ENST00000249806 NR2F2P24468 414 aa23.93■■□□□ 1.42
CLN6-201ENST00000249806 EIF4A3P38919 411 aaKnown RBP23.93■■□□□ 1.42
CLN6-201ENST00000249806 MARSP56192 900 aaKnown RBP23.93■■□□□ 1.42
CLN6-201ENST00000249806 CEP55Q53EZ4 464 aa23.93■■□□□ 1.42
CLN6-201ENST00000249806 CACNA2D4Q7Z3S7 1137 aa23.93■■□□□ 1.42
CLN6-201ENST00000249806 SLC5A5Q92911 643 aa23.93■■□□□ 1.42
CLN6-201ENST00000249806 PHF20L1A8MW92 1017 aa23.92■■□□□ 1.42
CLN6-201ENST00000249806 NOL4O94818 638 aa23.92■■□□□ 1.42
CLN6-201ENST00000249806 DGKZQ13574 1117 aa23.92■■□□□ 1.42
CLN6-201ENST00000249806 KNOP1Q1ED39 458 aaKnown RBP23.92■■□□□ 1.42
CLN6-201ENST00000249806 EDRF1Q3B7T1 1238 aa23.92■■□□□ 1.42
CLN6-201ENST00000249806 RINT1Q6NUQ1 792 aa23.92■■□□□ 1.42
CLN6-201ENST00000249806 TMCO3Q6UWJ1 677 aa23.92■■□□□ 1.42
CLN6-201ENST00000249806 EPM2AIP1Q7L775 607 aaPredicted RBP23.92■■□□□ 1.42
CLN6-201ENST00000249806 ZC3H3Q8IXZ2 948 aaKnown RBP23.92■■□□□ 1.42
CLN6-201ENST00000249806 SLC16A10Q8TF71 515 aa23.92■■□□□ 1.42
CLN6-201ENST00000249806 FAM53CQ9NYF3 392 aa23.92■■□□□ 1.42
CLN6-201ENST00000249806 CETN3O15182 167 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms