RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 SUPT20HQ8NEM7 779 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 CRYGNQ8WXF5 182 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 PSMB7Q99436 277 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 NAP1L4Q99733 375 aaKnown RBP17.42■□□□□ 0.38
LRFN1-201ENST00000248668 HINFPQ9BQA5 517 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 AKR1B10O60218 316 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 HNRNPH2P55795 449 aaKnown RBP17.42■□□□□ 0.38
LRFN1-201ENST00000248668 HYIQ5T013 277 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 TPH2Q8IWU9 490 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 NEK11Q8NG66 645 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 RABGGTAQ92696 567 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 PNKPQ96T60 521 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 MLXIPQ9HAP2 919 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 PPP1R1BQ9UD71 204 aaPredicted RBP17.42■□□□□ 0.38
LRFN1-201ENST00000248668 ATRNL1Q5VV63 1379 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 SASH3O75995 380 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 MYBP10242 640 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 ADAM9Q13443 819 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 SPA17Q15506 151 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 NBPF9Q3BBW0 867 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 ZCWPW2Q504Y3 356 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 ERMNQ8TAM6 284 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 CALCOCO1Q9P1Z2 691 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 PCDHA2Q9Y5H9 948 aa17.42■□□□□ 0.38
LRFN1-201ENST00000248668 TULP1O00294 542 aaPredicted RBP17.41■□□□□ 0.38
LRFN1-201ENST00000248668 KRT86O43790 486 aa17.41■□□□□ 0.38
LRFN1-201ENST00000248668 KCNA1Q09470 495 aa17.41■□□□□ 0.38
LRFN1-201ENST00000248668 KCNMA1Q12791 1236 aa17.41■□□□□ 0.38
LRFN1-201ENST00000248668 CC2D1AQ6P1N0 951 aaPredicted RBP17.41■□□□□ 0.38
LRFN1-201ENST00000248668 CEP112Q8N8E3 955 aa17.41■□□□□ 0.38
LRFN1-201ENST00000248668 WDR18Q9BV38 432 aa17.41■□□□□ 0.38
LRFN1-201ENST00000248668 RUSC1Q9BVN2 902 aa17.41■□□□□ 0.38
LRFN1-201ENST00000248668 LSM14BQ9BX40 385 aaKnown RBP17.41■□□□□ 0.38
LRFN1-201ENST00000248668 HDAC9Q9UKV0 1011 aa17.41■□□□□ 0.38
LRFN1-201ENST00000248668 FAM170AA1A519 330 aa17.41■□□□□ 0.38
LRFN1-201ENST00000248668 CTAGE15A4D2H0 777 aa17.41■□□□□ 0.38
LRFN1-201ENST00000248668 DDX39AO00148 427 aaKnown RBP17.41■□□□□ 0.38
LRFN1-201ENST00000248668 ZNF185O15231 689 aa17.41■□□□□ 0.38
LRFN1-201ENST00000248668 CTAGE8P0CG41 777 aa17.41■□□□□ 0.38
LRFN1-201ENST00000248668 POLD1P28340 1107 aa17.41■□□□□ 0.38
LRFN1-201ENST00000248668 CTAGE6Q86UF2 777 aa17.41■□□□□ 0.38
LRFN1-201ENST00000248668 CTAGE4Q8IX94 777 aa17.41■□□□□ 0.38
LRFN1-201ENST00000248668 ANKZF1Q9H8Y5 726 aa17.41■□□□□ 0.38
LRFN1-201ENST00000248668 C10orf71Q711Q0 1435 aa17.41■□□□□ 0.38
LRFN1-201ENST00000248668 NPM3O75607 178 aaKnown RBP17.4■□□□□ 0.38
LRFN1-201ENST00000248668 KIF11P52732 1056 aa17.4■□□□□ 0.38
LRFN1-201ENST00000248668 POLR2FP61218 127 aaKnown RBP17.4■□□□□ 0.38
LRFN1-201ENST00000248668 GIT2Q14161 759 aa17.4■□□□□ 0.38
LRFN1-201ENST00000248668 CAMKK2Q96RR4 588 aa17.4■□□□□ 0.38
LRFN1-201ENST00000248668 EIF2AK1Q9BQI3 630 aaKnown RBP17.4■□□□□ 0.38
LRFN1-201ENST00000248668 IFIH1Q9BYX4 1025 aaKnown RBP17.4■□□□□ 0.38
LRFN1-201ENST00000248668 SUGCTQ9HAC7 445 aa17.4■□□□□ 0.38
LRFN1-201ENST00000248668 HERC5Q9UII4 1024 aaKnown RBP17.4■□□□□ 0.38
LRFN1-201ENST00000248668 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.4■□□□□ 0.38
LRFN1-201ENST00000248668 POLR3GO15318 223 aaPredicted RBP17.4■□□□□ 0.38
LRFN1-201ENST00000248668 NR2F2P24468 414 aa17.4■□□□□ 0.38
LRFN1-201ENST00000248668 EPS15P42566 896 aa17.4■□□□□ 0.38
LRFN1-201ENST00000248668 GFPT1Q06210 699 aaPredicted RBP17.4■□□□□ 0.38
LRFN1-201ENST00000248668 MBOAT7Q96N66 472 aa17.4■□□□□ 0.38
LRFN1-201ENST00000248668 JADE2Q9NQC1 790 aa17.4■□□□□ 0.38
LRFN1-201ENST00000248668 CLIC2O15247 247 aa17.4■□□□□ 0.38
LRFN1-201ENST00000248668 ZRANB2O95218 330 aaKnown RBP eCLIP17.4■□□□□ 0.38
LRFN1-201ENST00000248668 FOSP01100 380 aaPredicted RBP17.4■□□□□ 0.38
LRFN1-201ENST00000248668 KIF5AQ12840 1032 aa17.4■□□□□ 0.38
LRFN1-201ENST00000248668 KSR1Q8IVT5 923 aa17.4■□□□□ 0.38
LRFN1-201ENST00000248668 FAM151AQ8WW52 585 aa17.4■□□□□ 0.38
LRFN1-201ENST00000248668 GOPCQ9HD26 462 aa17.4■□□□□ 0.38
LRFN1-201ENST00000248668 PLAGL2Q9UPG8 496 aa17.4■□□□□ 0.38
LRFN1-201ENST00000248668 EIF3CLB5ME19 914 aaKnown RBP17.39■□□□□ 0.37
LRFN1-201ENST00000248668 RPA1P27694 616 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 AMPD2Q01433 879 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 Q4G0T1 1027 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 POTEAQ6S8J7 498 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 EIF3CQ99613 913 aaKnown RBP17.39■□□□□ 0.37
LRFN1-201ENST00000248668 HOMER2Q9NSB8 354 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 TMX2Q9Y320 296 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 CNTNAP1P78357 1384 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 BRD2P25440 801 aaKnown RBP17.39■□□□□ 0.37
LRFN1-201ENST00000248668 PLA2G4AP47712 749 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 DNA2P51530 1060 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 TEX2Q8IWB9 1127 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 KCTD10Q9H3F6 313 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 ARFGAP3Q9NP61 516 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 VAV3Q9UKW4 847 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 GCNT3O95395 438 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 MOCS3O95396 460 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 TBC1D8O95759 1140 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 DCAF17Q5H9S7 520 aaPredicted RBP17.39■□□□□ 0.37
LRFN1-201ENST00000248668 LRCH2Q5VUJ6 765 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 TCERG1LQ5VWI1 586 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 CPXCR1Q8N123 301 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 BAP1Q92560 729 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 DYDC2Q96IM9 177 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 MMS19Q96T76 1030 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 MYO1AQ9UBC5 1043 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 CAPN6Q9Y6Q1 641 aa17.39■□□□□ 0.37
LRFN1-201ENST00000248668 COL4A5P29400 1685 aa17.38■□□□□ 0.37
LRFN1-201ENST00000248668 A0A1W2PQJ5 194 aa17.38■□□□□ 0.37
LRFN1-201ENST00000248668 ACTN1P12814 892 aa17.38■□□□□ 0.37
LRFN1-201ENST00000248668 BTNL9Q6UXG8 535 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms