RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 ARHGAP25P42331 645 aa16.72■□□□□ 0.27
DDX49-201ENST00000247003 TUBB4BP68371 445 aa16.72■□□□□ 0.27
DDX49-201ENST00000247003 GIT2Q14161 759 aa16.72■□□□□ 0.27
DDX49-201ENST00000247003 ARSHQ5FYA8 562 aa16.72■□□□□ 0.27
DDX49-201ENST00000247003 TEX35Q5T0J7 233 aa16.72■□□□□ 0.27
DDX49-201ENST00000247003 LDHDQ86WU2 507 aa16.72■□□□□ 0.27
DDX49-201ENST00000247003 SCFD1Q8WVM8 642 aa16.72■□□□□ 0.27
DDX49-201ENST00000247003 JAKMIP2Q96AA8 810 aa16.72■□□□□ 0.27
DDX49-201ENST00000247003 EDEM3Q9BZQ6 932 aa16.72■□□□□ 0.27
DDX49-201ENST00000247003 TSGA10Q9BZW7 698 aa16.72■□□□□ 0.27
DDX49-201ENST00000247003 BHMT2Q9H2M3 363 aa16.72■□□□□ 0.27
DDX49-201ENST00000247003 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.72■□□□□ 0.27
DDX49-201ENST00000247003 FAM184BQ9ULE4 1060 aa16.72■□□□□ 0.27
DDX49-201ENST00000247003 CCPG1Q9ULG6 757 aa16.72■□□□□ 0.27
DDX49-201ENST00000247003 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.72■□□□□ 0.27
DDX49-201ENST00000247003 WDR46O15213 610 aaKnown RBP16.71■□□□□ 0.27
DDX49-201ENST00000247003 CHMP2AO43633 222 aa16.71■□□□□ 0.27
DDX49-201ENST00000247003 CALUO43852 315 aaPredicted RBP16.71■□□□□ 0.27
DDX49-201ENST00000247003 RPS12P25398 132 aaKnown RBP16.71■□□□□ 0.27
DDX49-201ENST00000247003 PRELPP51888 382 aa16.71■□□□□ 0.27
DDX49-201ENST00000247003 MARSP56192 900 aaKnown RBP16.71■□□□□ 0.27
DDX49-201ENST00000247003 MAP3K10Q02779 954 aa16.71■□□□□ 0.27
DDX49-201ENST00000247003 PPP2R5CQ13362 524 aa16.71■□□□□ 0.27
DDX49-201ENST00000247003 CEP55Q53EZ4 464 aa16.71■□□□□ 0.27
DDX49-201ENST00000247003 ZNF662Q6ZS27 426 aa16.71■□□□□ 0.27
DDX49-201ENST00000247003 ARHGAP27Q6ZUM4 889 aa16.71■□□□□ 0.27
DDX49-201ENST00000247003 KRT26Q7Z3Y9 468 aa16.71■□□□□ 0.27
DDX49-201ENST00000247003 GPR161Q8N6U8 529 aaKnown RBP16.71■□□□□ 0.27
DDX49-201ENST00000247003 CYP2W1Q8TAV3 490 aa16.71■□□□□ 0.27
DDX49-201ENST00000247003 LPAR1Q92633 364 aa16.71■□□□□ 0.27
DDX49-201ENST00000247003 WDR18Q9BV38 432 aa16.71■□□□□ 0.27
DDX49-201ENST00000247003 NUCKS1Q9H1E3 243 aaKnown RBP16.71■□□□□ 0.27
DDX49-201ENST00000247003 GINM1Q9NU53 330 aa16.71■□□□□ 0.27
DDX49-201ENST00000247003 PLAGL2Q9UPG8 496 aa16.71■□□□□ 0.27
DDX49-201ENST00000247003 FER1L6Q2WGJ9 1857 aa16.71■□□□□ 0.27
DDX49-201ENST00000247003 ICAM1P05362 532 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 H2AFXP16104 143 aaPredicted RBP16.7■□□□□ 0.26
DDX49-201ENST00000247003 GAP43P17677 238 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 MUTP22033 750 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 PSMC6P62333 389 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 HERVK_113P62684 666 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 ADAM9Q13443 819 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 RASA3Q14644 834 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 SRGAP1Q7Z6B7 1085 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 SFR1Q86XK3 245 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 TXLNBQ8N3L3 684 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 SLC5A5Q92911 643 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 ZNF577Q9BSK1 485 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 KCTD10Q9H3F6 313 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 OGFRQ9NZT2 677 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 REXO2Q9Y3B8 237 aaKnown RBP16.7■□□□□ 0.26
DDX49-201ENST00000247003 USO1O60763 962 aaKnown RBP16.7■□□□□ 0.26
DDX49-201ENST00000247003 PSMD10O75832 226 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 ERCC3P19447 782 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 NR2F2P24468 414 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 HNRNPH3P31942 346 aaKnown RBP16.7■□□□□ 0.26
DDX49-201ENST00000247003 CHMP4BP1P59074 171 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 WHAMMP3Q1A5X7 153 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 OTOP1Q7RTM1 612 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 MCF2L2Q86YR7 1114 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 RABGGTAQ92696 567 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 TEKT3Q9BXF9 490 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 FGFBP2Q9BYJ0 223 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 FBXO28Q9NVF7 368 aa16.7■□□□□ 0.26
DDX49-201ENST00000247003 CTDP1Q9Y5B0 961 aaPredicted RBP16.7■□□□□ 0.26
DDX49-201ENST00000247003 GOLGB1Q14789 3259 aaKnown RBP16.69■□□□□ 0.26
DDX49-201ENST00000247003 LOXHD1Q8IVV2 1947 aa16.69■□□□□ 0.26
DDX49-201ENST00000247003 NKRFO15226 690 aaKnown RBP eCLIP16.69■□□□□ 0.26
DDX49-201ENST00000247003 FAM13AO94988 1023 aa16.69■□□□□ 0.26
DDX49-201ENST00000247003 UBXN2AP68543 259 aa16.69■□□□□ 0.26
DDX49-201ENST00000247003 KIF5AQ12840 1032 aa16.69■□□□□ 0.26
DDX49-201ENST00000247003 KNOP1Q1ED39 458 aaKnown RBP16.69■□□□□ 0.26
DDX49-201ENST00000247003 TMCO3Q6UWJ1 677 aa16.69■□□□□ 0.26
DDX49-201ENST00000247003 RRAGAQ7L523 313 aa16.69■□□□□ 0.26
DDX49-201ENST00000247003 TPH2Q8IWU9 490 aa16.69■□□□□ 0.26
DDX49-201ENST00000247003 PRPF38AQ8NAV1 312 aaKnown RBP16.69■□□□□ 0.26
DDX49-201ENST00000247003 TBC1D5Q92609 795 aa16.69■□□□□ 0.26
DDX49-201ENST00000247003 GLIS2Q9BZE0 524 aaPredicted RBP16.69■□□□□ 0.26
DDX49-201ENST00000247003 CEP72Q9P209 647 aa16.69■□□□□ 0.26
DDX49-201ENST00000247003 PGAP2Q9UHJ9 254 aa16.69■□□□□ 0.26
DDX49-201ENST00000247003 LRRC53A6NM62 1247 aa16.68■□□□□ 0.26
DDX49-201ENST00000247003 EML1O00423 815 aa16.68■□□□□ 0.26
DDX49-201ENST00000247003 GCNT3O95395 438 aa16.68■□□□□ 0.26
DDX49-201ENST00000247003 RPL13P26373 211 aaKnown RBP16.68■□□□□ 0.26
DDX49-201ENST00000247003 PTGER2P43116 358 aa16.68■□□□□ 0.26
DDX49-201ENST00000247003 VAV2P52735 878 aa16.68■□□□□ 0.26
DDX49-201ENST00000247003 CTTNQ14247 550 aaKnown RBP16.68■□□□□ 0.26
DDX49-201ENST00000247003 TRIM59Q8IWR1 403 aa16.68■□□□□ 0.26
DDX49-201ENST00000247003 ZC3H3Q8IXZ2 948 aaKnown RBP16.68■□□□□ 0.26
DDX49-201ENST00000247003 HOOK2Q96ED9 719 aa16.68■□□□□ 0.26
DDX49-201ENST00000247003 DYDC2Q96IM9 177 aa16.68■□□□□ 0.26
DDX49-201ENST00000247003 RGL1Q9NZL6 768 aa16.68■□□□□ 0.26
DDX49-201ENST00000247003 DDX41Q9UJV9 622 aaKnown RBP16.68■□□□□ 0.26
DDX49-201ENST00000247003 TRAF3IP3Q9Y228 551 aa16.68■□□□□ 0.26
DDX49-201ENST00000247003 RBBP6Q7Z6E9 1792 aaKnown RBP16.68■□□□□ 0.26
DDX49-201ENST00000247003 SPDYE4A6NLX3 237 aa16.68■□□□□ 0.26
DDX49-201ENST00000247003 POTEB2H3BUK9 544 aa16.68■□□□□ 0.26
DDX49-201ENST00000247003 PDXKO00764 312 aa16.68■□□□□ 0.26
DDX49-201ENST00000247003 ZBTB7AO95365 584 aa16.68■□□□□ 0.26
DDX49-201ENST00000247003 ZNF280AP59817 542 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms