RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 AMACRQ9UHK6 382 aa10.11□□□□□ -0.79
SRSF6-201ENST00000244020 G3BP2Q9UN86 482 aaKnown RBP10.11□□□□□ -0.79
SRSF6-201ENST00000244020 PGRMC1O00264 195 aaKnown RBP10.1□□□□□ -0.79
SRSF6-201ENST00000244020 SKAP2O75563 359 aaPredicted RBP10.1□□□□□ -0.79
SRSF6-201ENST00000244020 VPS41P49754 854 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 ZNF365Q70YC5 407 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 NELFCDQ8IXH7 590 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 KIAA0895Q8NCT3 520 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 RAB34Q9BZG1 259 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 TRIM37O94972 964 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 GOLGA8HP0CJ92 632 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 COG7P83436 770 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 SATB1Q01826 763 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 TSNAXIP1Q2TAA8 658 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 HOOK3Q86VS8 718 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 GBP7Q8N8V2 638 aaPredicted RBP10.1□□□□□ -0.79
SRSF6-201ENST00000244020 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.1□□□□□ -0.799e-40■□□□□ 11
SRSF6-201ENST00000244020 NOD2Q9HC29 1040 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 CEP72Q9P209 647 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 SEC63Q9UGP8 760 aaKnown RBP10.1□□□□□ -0.79
SRSF6-201ENST00000244020 ATP6V0A2Q9Y487 856 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 MYO5AQ9Y4I1 1855 aaKnown RBP10.1□□□□□ -0.79
SRSF6-201ENST00000244020 FAM170AA1A519 330 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 PCP11498 1178 aaKnown RBP10.1□□□□□ -0.79
SRSF6-201ENST00000244020 MEI1Q5TIA1 1274 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 CENPPQ6IPU0 288 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 C6orf89Q6UWU4 347 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 ADAT2Q7Z6V5 191 aaKnown RBP10.1□□□□□ -0.79
SRSF6-201ENST00000244020 VPS36Q86VN1 386 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 CCDC25Q86WR0 208 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 C3orf20Q8ND61 904 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 ARHGEF2Q92974 986 aaKnown RBP10.1□□□□□ -0.79
SRSF6-201ENST00000244020 STMN2Q93045 179 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 PACSIN1Q9BY11 444 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 C6orf50Q9HD87 102 aa10.1□□□□□ -0.79
SRSF6-201ENST00000244020 A0A087X0T9 212 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 ENO4A6NNW6 628 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 LCA5LO95447 670 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 FAM228BP0C875 321 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 IFNAR2P48551 515 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 LRRC63Q05C16 580 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 CHRNDQ07001 517 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 SLC18A3Q16572 532 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 GNPTABQ3T906 1256 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 WLSQ5T9L3 541 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 KRT79Q5XKE5 535 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 MYOCDQ8IZQ8 938 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 ZNF444Q8N0Y2 327 aaPredicted RBP10.09□□□□□ -0.79
SRSF6-201ENST00000244020 LMBR1Q8WVP7 490 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 ANKS1AQ92625 1134 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 PBKQ96KB5 322 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 CNOT10Q9H9A5 744 aaKnown RBP10.09□□□□□ -0.79
SRSF6-201ENST00000244020 SIPA1L3O60292 1781 aaPredicted RBP10.09□□□□□ -0.79
SRSF6-201ENST00000244020 LRRD1A4D1F6 860 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 TSPY3P0CV98 308 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 TSPY8P0CW00 308 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 FKBP3Q00688 224 aaKnown RBP10.09□□□□□ -0.79
SRSF6-201ENST00000244020 VSIG1Q86XK7 387 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 LARP4BQ92615 738 aaKnown RBP10.09□□□□□ -0.79
SRSF6-201ENST00000244020 P3H4Q92791 437 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 ELAC2Q9BQ52 826 aaKnown RBP10.09□□□□□ -0.79
SRSF6-201ENST00000244020 BRIP1Q9BX63 1249 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 TCEAL9Q9UHQ7 104 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 COL4A3BPQ9Y5P4 624 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 hCG_2014768A0A024R1R8 64 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 SMCO2A6NFE2 343 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 MMEP08473 750 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 CYP2D6P10635 497 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 TCERG1LQ5VWI1 586 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 NEK8Q86SG6 692 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 UHMK1Q8TAS1 419 aaKnown RBP10.09□□□□□ -0.79
SRSF6-201ENST00000244020 BAP1Q92560 729 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 CUL5Q93034 780 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 ATP6V0A4Q9HBG4 840 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 SH3GLB2Q9NR46 395 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 MYH7P12883 1935 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 LMTK3Q96Q04 1460 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 SCN11AQ9UI33 1791 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 SRRM3A6NNA2 597 aaPredicted RBP10.09□□□□□ -0.79
SRSF6-201ENST00000244020 GNA11P29992 359 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 NAIF1Q69YI7 327 aaPredicted RBP10.09□□□□□ -0.79
SRSF6-201ENST00000244020 UNC13DQ70J99 1090 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 INTS8Q75QN2 995 aaKnown RBP10.09□□□□□ -0.79
SRSF6-201ENST00000244020 KRT25Q7Z3Z0 450 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 NSMCE1Q8WV22 266 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 SPDL1Q96EA4 605 aa10.09□□□□□ -0.79
SRSF6-201ENST00000244020 BIN2Q9UBW5 565 aaPredicted RBP10.09□□□□□ -0.79
SRSF6-201ENST00000244020 TNS3Q68CZ2 1445 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 CCT8L1PA6NM43 557 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 RGS16O15492 202 aaPredicted RBP10.08□□□□□ -0.8
SRSF6-201ENST00000244020 ATP6V1G2O95670 118 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 GUF1Q8N442 669 aaKnown RBP10.08□□□□□ -0.8
SRSF6-201ENST00000244020 SNX29Q8TEQ0 813 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 SAAL1Q96ER3 474 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 EDEM3Q9BZQ6 932 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 LRRC27Q9C0I9 530 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 INTS9Q9NV88 658 aaKnown RBP10.08□□□□□ -0.8
SRSF6-201ENST00000244020 PNMA2Q9UL42 364 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 JAG2Q9Y219 1238 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 ZBTB1Q9Y2K1 713 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms