RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 SMNDC1O75940 238 aaKnown RBP eCLIP16.37■□□□□ 0.21
HOXC12-201ENST00000243103 DNM2P50570 870 aa16.37■□□□□ 0.21
HOXC12-201ENST00000243103 RPS6KA1Q15418 735 aa16.37■□□□□ 0.21
HOXC12-201ENST00000243103 C6orf89Q6UWU4 347 aa16.37■□□□□ 0.21
HOXC12-201ENST00000243103 SLC5A1P13866 664 aa16.37■□□□□ 0.21
HOXC12-201ENST00000243103 CREB1P16220 341 aa16.37■□□□□ 0.21
HOXC12-201ENST00000243103 ZBED6P86452 979 aa16.37■□□□□ 0.21
HOXC12-201ENST00000243103 BYSLQ13895 437 aaKnown RBP16.37■□□□□ 0.21
HOXC12-201ENST00000243103 UAP1Q16222 522 aaPredicted RBP16.37■□□□□ 0.21
HOXC12-201ENST00000243103 AKNAD1Q5T1N1 836 aa16.37■□□□□ 0.21
HOXC12-201ENST00000243103 CNBD1Q8NA66 436 aa16.37■□□□□ 0.21
HOXC12-201ENST00000243103 ZNF335Q9H4Z2 1342 aaPredicted RBP16.36■□□□□ 0.21
HOXC12-201ENST00000243103 CETN3O15182 167 aa16.36■□□□□ 0.21
HOXC12-201ENST00000243103 ACSL3O95573 720 aa16.36■□□□□ 0.21
HOXC12-201ENST00000243103 SERPINB4P48594 390 aa16.36■□□□□ 0.21
HOXC12-201ENST00000243103 SLC8A3P57103 927 aa16.36■□□□□ 0.21
HOXC12-201ENST00000243103 STK4Q13043 487 aa16.36■□□□□ 0.21
HOXC12-201ENST00000243103 GLE1Q53GS7 698 aaKnown RBP16.36■□□□□ 0.21
HOXC12-201ENST00000243103 KLHDC7AQ5VTJ3 777 aa16.36■□□□□ 0.21
HOXC12-201ENST00000243103 HEATR3Q7Z4Q2 680 aa16.36■□□□□ 0.21
HOXC12-201ENST00000243103 WASF1Q92558 559 aa16.36■□□□□ 0.21
HOXC12-201ENST00000243103 MGRN1O60291 552 aa16.36■□□□□ 0.21
HOXC12-201ENST00000243103 NQO1P15559 274 aaKnown RBP16.36■□□□□ 0.21
HOXC12-201ENST00000243103 LRRC36Q1X8D7 754 aa16.36■□□□□ 0.21
HOXC12-201ENST00000243103 LMNTD2Q8IXW0 634 aa16.36■□□□□ 0.21
HOXC12-201ENST00000243103 EPS8L3Q8TE67 593 aaKnown RBP16.36■□□□□ 0.21
HOXC12-201ENST00000243103 LMCD1Q9NZU5 365 aa16.36■□□□□ 0.21
HOXC12-201ENST00000243103 GSG1L2A8MUP6 293 aa16.35■□□□□ 0.21
HOXC12-201ENST00000243103 TARSP26639 723 aaKnown RBP16.35■□□□□ 0.21
HOXC12-201ENST00000243103 PRDX5P30044 214 aa16.35■□□□□ 0.21
HOXC12-201ENST00000243103 HP1BP3Q5SSJ5 553 aaPredicted RBP16.35■□□□□ 0.21
HOXC12-201ENST00000243103 BRINP3Q76B58 766 aa16.35■□□□□ 0.21
HOXC12-201ENST00000243103 PFDN1O60925 122 aa16.35■□□□□ 0.21
HOXC12-201ENST00000243103 DRD4P21917 467 aa16.35■□□□□ 0.21
HOXC12-201ENST00000243103 C11orf91Q3C1V1 193 aa16.35■□□□□ 0.21
HOXC12-201ENST00000243103 ZC3H12AQ5D1E8 599 aaKnown RBP16.35■□□□□ 0.21
HOXC12-201ENST00000243103 FANCBQ8NB91 859 aa16.35■□□□□ 0.21
HOXC12-201ENST00000243103 ERLEC1Q96DZ1 483 aa16.35■□□□□ 0.21
HOXC12-201ENST00000243103 MCM9Q9NXL9 1143 aa16.35■□□□□ 0.21
HOXC12-201ENST00000243103 SLAIN2Q9P270 581 aa16.35■□□□□ 0.21
HOXC12-201ENST00000243103 PCDH11XQ9BZA7 1347 aa16.35■□□□□ 0.21
HOXC12-201ENST00000243103 PCDH11YQ9BZA8 1340 aa16.35■□□□□ 0.21
HOXC12-201ENST00000243103 H7C1D1 291 aa16.35■□□□□ 0.21
HOXC12-201ENST00000243103 FMNL1O95466 1100 aaPredicted RBP16.35■□□□□ 0.21
HOXC12-201ENST00000243103 CCNJLQ8IV13 435 aa16.35■□□□□ 0.21
HOXC12-201ENST00000243103 SYT15Q9BQS2 421 aa16.35■□□□□ 0.21
HOXC12-201ENST00000243103 SLC4A7Q9Y6M7 1214 aa16.35■□□□□ 0.21
HOXC12-201ENST00000243103 ENTPD5O75356 428 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 USP17L8P0C7I0 530 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 ZNF131P52739 623 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 CHRNDQ07001 517 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 TMEM62Q0P6H9 643 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 XRCC4Q13426 336 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 RCN2Q14257 317 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 ZNF658Q5TYW1 1059 aaPredicted RBP16.34■□□□□ 0.21
HOXC12-201ENST00000243103 NBPF5PQ86XG9 351 aaPredicted RBP16.34■□□□□ 0.21
HOXC12-201ENST00000243103 LRRC45Q96CN5 670 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 NUDCD1Q96RS6 583 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 CYTH2Q99418 400 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 UBA5Q9GZZ9 404 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 SRP68Q9UHB9 627 aaKnown RBP16.34■□□□□ 0.21
HOXC12-201ENST00000243103 PCDHGC5Q9Y5F6 944 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 ANO9A1A5B4 782 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 USP17L3A6NCW0 530 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 USP17L4A6NCW7 530 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 DEXIO95424 95 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 USP17L1Q7RTZ2 530 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 APBB1IPQ7Z5R6 666 aaPredicted RBP16.34■□□□□ 0.21
HOXC12-201ENST00000243103 RNF10Q8N5U6 811 aaKnown RBP16.34■□□□□ 0.21
HOXC12-201ENST00000243103 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.34■□□□□ 0.21
HOXC12-201ENST00000243103 TRIP13Q15645 432 aaPredicted RBP16.34■□□□□ 0.21
HOXC12-201ENST00000243103 PPP4R3AQ6IN85 833 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 GIGYF2Q6Y7W6 1299 aaKnown RBP16.34■□□□□ 0.21
HOXC12-201ENST00000243103 TTC8Q8TAM2 541 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 DNAJC7Q99615 494 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 OCEL1Q9H607 264 aa16.34■□□□□ 0.21
HOXC12-201ENST00000243103 MAGEB6P1A0A0J9YX57 407 aa16.33■□□□□ 0.2
HOXC12-201ENST00000243103 MARCH6O60337 910 aa16.33■□□□□ 0.2
HOXC12-201ENST00000243103 CDCA2Q69YH5 1023 aaPredicted RBP16.33■□□□□ 0.2
HOXC12-201ENST00000243103 MYLK4Q86YV6 388 aaPredicted RBP16.33■□□□□ 0.2
HOXC12-201ENST00000243103 CRACR2BQ8N4Y2 399 aaPredicted RBP16.33■□□□□ 0.2
HOXC12-201ENST00000243103 FAM114A2Q9NRY5 505 aa16.33■□□□□ 0.2
HOXC12-201ENST00000243103 HAO1Q9UJM8 370 aa16.33■□□□□ 0.2
HOXC12-201ENST00000243103 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.33■□□□□ 0.2
HOXC12-201ENST00000243103 RASSF10A6NK89 507 aa16.33■□□□□ 0.2
HOXC12-201ENST00000243103 TPP2P29144 1249 aaPredicted RBP16.33■□□□□ 0.2
HOXC12-201ENST00000243103 LONRF1Q17RB8 773 aa16.33■□□□□ 0.2
HOXC12-201ENST00000243103 INF2Q27J81 1249 aa16.33■□□□□ 0.2
HOXC12-201ENST00000243103 TBC1D25Q3MII6 688 aa16.33■□□□□ 0.2
HOXC12-201ENST00000243103 YTHDF3Q7Z739 585 aaKnown RBP16.33■□□□□ 0.2
HOXC12-201ENST00000243103 SPATA20Q8TB22 786 aa16.33■□□□□ 0.2
HOXC12-201ENST00000243103 RTCBQ9Y3I0 505 aaKnown RBP16.33■□□□□ 0.2
HOXC12-201ENST00000243103 ITIH6Q6UXX5 1313 aa16.32■□□□□ 0.2
HOXC12-201ENST00000243103 WDR91A4D1P6 747 aa16.32■□□□□ 0.2
HOXC12-201ENST00000243103 A6NNZ2 444 aa16.32■□□□□ 0.2
HOXC12-201ENST00000243103 MTM1Q13496 603 aa16.32■□□□□ 0.2
HOXC12-201ENST00000243103 TUBB8Q3ZCM7 444 aa16.32■□□□□ 0.2
HOXC12-201ENST00000243103 MFSD4BQ5TF39 518 aa16.32■□□□□ 0.2
HOXC12-201ENST00000243103 OLFML2BQ68BL8 750 aa16.32■□□□□ 0.2
HOXC12-201ENST00000243103 ZFYP08048 801 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms