RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 ZNF579Q8NAF0 562 aaKnown RBP11.96□□□□□ -0.49
COPA-201ENST00000241704 DCAF4Q8WV16 495 aa11.96□□□□□ -0.49
COPA-201ENST00000241704 KIFAP3Q92845 792 aa11.96□□□□□ -0.49
COPA-201ENST00000241704 EPSTI1Q96J88 318 aa11.96□□□□□ -0.49
COPA-201ENST00000241704 SUDS3Q9H7L9 328 aaPredicted RBP11.96□□□□□ -0.49
COPA-201ENST00000241704 SLC40A1Q9NP59 571 aa11.96□□□□□ -0.49
COPA-201ENST00000241704 C3P01024 1663 aa11.96□□□□□ -0.49
COPA-201ENST00000241704 PALM3A6NDB9 673 aaPredicted RBP11.96□□□□□ -0.5
COPA-201ENST00000241704 MFAP3LO75121 409 aa11.96□□□□□ -0.5
COPA-201ENST00000241704 PRPF38AQ8NAV1 312 aaKnown RBP11.96□□□□□ -0.5
COPA-201ENST00000241704 IGDCC4Q8TDY8 1250 aa11.96□□□□□ -0.5
COPA-201ENST00000241704 TCP11Q8WWU5 503 aa11.96□□□□□ -0.5
COPA-201ENST00000241704 YIPF3Q9GZM5 350 aa11.96□□□□□ -0.5
COPA-201ENST00000241704 MAN1B1Q9UKM7 699 aa11.96□□□□□ -0.5
COPA-201ENST00000241704 BCL9O00512 1426 aa11.96□□□□□ -0.5
COPA-201ENST00000241704 XRCC5P13010 732 aaKnown RBP11.95□□□□□ -0.5
COPA-201ENST00000241704 TNNI1P19237 187 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 POLGP54098 1239 aaPredicted RBP11.95□□□□□ -0.5
COPA-201ENST00000241704 NLRP14Q86W24 1093 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 GSPT2Q8IYD1 628 aaKnown RBP11.95□□□□□ -0.5
COPA-201ENST00000241704 TC2NQ8N9U0 490 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 DHTKD1Q96HY7 919 aaPredicted RBP11.95□□□□□ -0.5
COPA-201ENST00000241704 CDHR1Q96JP9 859 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 SELENOSQ9BQE4 189 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 NOP53Q9NZM5 478 aaKnown RBP11.95□□□□□ -0.5
COPA-201ENST00000241704 ARMCX3Q9UH62 379 aaPredicted RBP11.95□□□□□ -0.5
COPA-201ENST00000241704 TMEM110-MUSTN1A8MSY1 372 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 PREPLQ4J6C6 727 aaPredicted RBP11.95□□□□□ -0.5
COPA-201ENST00000241704 FAM178BQ8IXR5 827 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 GRAMD1CQ8IYS0 662 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.95□□□□□ -0.5
COPA-201ENST00000241704 ZKSCAN4Q969J2 545 aaPredicted RBP11.95□□□□□ -0.5
COPA-201ENST00000241704 VCXQ9H320 206 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.95□□□□□ -0.5
COPA-201ENST00000241704 RABGAP1Q9Y3P9 1069 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 GBP1P32455 592 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 KLHL30Q0D2K2 578 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 PDCD2Q16342 344 aaPredicted RBP11.95□□□□□ -0.5
COPA-201ENST00000241704 Q3C1V9 767 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 NOA1Q8NC60 698 aaKnown RBP11.95□□□□□ -0.5
COPA-201ENST00000241704 TRIM58Q8NG06 486 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 TSC22D3Q99576 134 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 EPN3Q9H201 632 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 C2orf54Q08AI8 447 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 ZNF658Q5TYW1 1059 aaPredicted RBP11.95□□□□□ -0.5
COPA-201ENST00000241704 SFMBT2Q5VUG0 894 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 ABI1Q8IZP0 508 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 UBLCP1Q8WVY7 318 aaPredicted RBP11.95□□□□□ -0.5
COPA-201ENST00000241704 ATP6V0A1Q93050 837 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 WDR11Q9BZH6 1224 aa11.95□□□□□ -0.5
COPA-201ENST00000241704 GPBP1L1Q9HC44 474 aaPredicted RBP11.95□□□□□ -0.5
COPA-201ENST00000241704 A1CFQ9NQ94 594 aaKnown RBP11.95□□□□□ -0.5
COPA-201ENST00000241704 LRRIQ4A6NIV6 560 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 ZBTB5O15062 677 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 AARSP49588 968 aaKnown RBP eCLIP11.94□□□□□ -0.54e-7■□□□□ 9.5
COPA-201ENST00000241704 MYO1EQ12965 1108 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 RRAGAQ7L523 313 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 HOMEZQ8IX15 550 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 RDH13Q8NBN7 331 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 TRIM4Q9C037 500 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 SAMSN1Q9NSI8 373 aaKnown RBP11.94□□□□□ -0.5
COPA-201ENST00000241704 PRPF6O94906 941 aaKnown RBP11.94□□□□□ -0.5
COPA-201ENST00000241704 GUCY2FP51841 1108 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 SPP2Q13103 211 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 UBE2SQ16763 222 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 ZNF473Q8WTR7 871 aaKnown RBP11.94□□□□□ -0.5
COPA-201ENST00000241704 KCNB2Q92953 911 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 ENO4A6NNW6 628 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 FSBPO95073 299 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 COPB1P53618 953 aaKnown RBP11.94□□□□□ -0.5
COPA-201ENST00000241704 SNX16P57768 344 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 NWD1Q149M9 1564 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 RNF217Q8TC41 542 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 OXER1Q8TDS5 423 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 OTUD5Q96G74 571 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 PAGE5Q96GU1 130 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 METTL14Q9HCE5 456 aaKnown RBP11.94□□□□□ -0.5
COPA-201ENST00000241704 EPB41L4AQ9HCS5 686 aaPredicted RBP11.94□□□□□ -0.5
COPA-201ENST00000241704 NLRC4Q9NPP4 1024 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 RASAL2Q9UJF2 1139 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 TAF6LQ9Y6J9 622 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.94□□□□□ -0.5
COPA-201ENST00000241704 HMGB1P1B2RPK0 211 aaPredicted RBP11.94□□□□□ -0.5
COPA-201ENST00000241704 BCRP11274 1271 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 TCP1P17987 556 aaKnown RBP11.94□□□□□ -0.5
COPA-201ENST00000241704 LIG4P49917 911 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 PPARDQ03181 441 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 DDR1Q08345 913 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 ADAM9Q13443 819 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 TSNAXIP1Q2TAA8 658 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 CFAP221Q4G0U5 840 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 CCDC125Q86Z20 511 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 SLC7A3Q8WY07 619 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 ZNF577Q9BSK1 485 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 VCPKMTQ9H867 229 aa11.94□□□□□ -0.5
COPA-201ENST00000241704 CNOT7Q9UIV1 285 aaKnown RBP11.94□□□□□ -0.5
COPA-201ENST00000241704 KIF1AQ12756 1690 aa11.93□□□□□ -0.5
COPA-201ENST00000241704 FAM196BA6NMK8 535 aa11.93□□□□□ -0.5
COPA-201ENST00000241704 H0YCG3 227 aa11.93□□□□□ -0.5
COPA-201ENST00000241704 VIMP08670 466 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms