RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 PAIP2Q9BPZ3 127 aaKnown RBP12.6□□□□□ -0.39
CCND1-201ENST00000227507 NUP58Q9BVL2 599 aa12.6□□□□□ -0.39
CCND1-201ENST00000227507 CNOT7Q9UIV1 285 aaKnown RBP12.6□□□□□ -0.39
CCND1-201ENST00000227507 CAPN11Q9UMQ6 739 aa12.6□□□□□ -0.39
CCND1-201ENST00000227507 ITIH6Q6UXX5 1313 aa12.6□□□□□ -0.39
CCND1-201ENST00000227507 PNPLA7Q6ZV29 1317 aa12.6□□□□□ -0.39
CCND1-201ENST00000227507 KCNK3O14649 394 aa12.59□□□□□ -0.39
CCND1-201ENST00000227507 CYP2D6P10635 497 aa12.59□□□□□ -0.39
CCND1-201ENST00000227507 PBX1P40424 430 aa12.59□□□□□ -0.39
CCND1-201ENST00000227507 RSBN1LQ6PCB5 846 aaPredicted RBP12.59□□□□□ -0.39
CCND1-201ENST00000227507 SPATS2Q86XZ4 545 aaKnown RBP12.59□□□□□ -0.39
CCND1-201ENST00000227507 MYCBPAPQ8TBZ2 947 aa12.59□□□□□ -0.39
CCND1-201ENST00000227507 DPH5Q9H2P9 285 aa12.59□□□□□ -0.39
CCND1-201ENST00000227507 DAGLAQ9Y4D2 1042 aa12.59□□□□□ -0.39
CCND1-201ENST00000227507 DISP2A7MBM2 1401 aa12.59□□□□□ -0.39
CCND1-201ENST00000227507 FAM237AA0A1B0GTK4 181 aa12.59□□□□□ -0.39
CCND1-201ENST00000227507 SMCO2A6NFE2 343 aa12.59□□□□□ -0.39
CCND1-201ENST00000227507 GFPT1Q06210 699 aaPredicted RBP12.59□□□□□ -0.39
CCND1-201ENST00000227507 MYO1EQ12965 1108 aa12.59□□□□□ -0.39
CCND1-201ENST00000227507 C3orf67Q6ZVT6 689 aa12.59□□□□□ -0.39
CCND1-201ENST00000227507 ADAT2Q7Z6V5 191 aaKnown RBP12.59□□□□□ -0.39
CCND1-201ENST00000227507 FBXO11Q86XK2 927 aa12.59□□□□□ -0.39
CCND1-201ENST00000227507 MICALL2Q8IY33 904 aa12.59□□□□□ -0.39
CCND1-201ENST00000227507 GPKOWQ92917 476 aaPredicted RBP eCLIP12.59□□□□□ -0.39
CCND1-201ENST00000227507 PARP4Q9UKK3 1724 aaKnown RBP12.59□□□□□ -0.39
CCND1-201ENST00000227507 WNT7AO00755 349 aa12.59□□□□□ -0.39
CCND1-201ENST00000227507 ONECUT3O60422 494 aaPredicted RBP12.59□□□□□ -0.39
CCND1-201ENST00000227507 ALAS1P13196 640 aa12.59□□□□□ -0.39
CCND1-201ENST00000227507 MDH1P40925 334 aaKnown RBP12.59□□□□□ -0.39
CCND1-201ENST00000227507 RAPGEF1Q13905 1077 aa12.59□□□□□ -0.39
CCND1-201ENST00000227507 FAM133BQ5BKY9 247 aaKnown RBP12.59□□□□□ -0.39
CCND1-201ENST00000227507 GKAP1Q5VSY0 366 aaPredicted RBP12.59□□□□□ -0.39
CCND1-201ENST00000227507 TBC1D1Q86TI0 1168 aaPredicted RBP12.59□□□□□ -0.39
CCND1-201ENST00000227507 AENQ8WTP8 325 aaKnown RBP12.59□□□□□ -0.39
CCND1-201ENST00000227507 STAG1Q8WVM7 1258 aa12.59□□□□□ -0.39
CCND1-201ENST00000227507 ANO9A1A5B4 782 aa12.58□□□□□ -0.39
CCND1-201ENST00000227507 GSG1L2A8MUP6 293 aa12.58□□□□□ -0.39
CCND1-201ENST00000227507 PHF20L1A8MW92 1017 aa12.58□□□□□ -0.39
CCND1-201ENST00000227507 GLI1P08151 1106 aa12.58□□□□□ -0.39
CCND1-201ENST00000227507 SCG2P13521 617 aa12.58□□□□□ -0.39
CCND1-201ENST00000227507 IFNAR2P48551 515 aa12.58□□□□□ -0.39
CCND1-201ENST00000227507 PTGISQ16647 500 aa12.58□□□□□ -0.39
CCND1-201ENST00000227507 DGKHQ86XP1 1220 aa12.58□□□□□ -0.39
CCND1-201ENST00000227507 POLLQ9UGP5 575 aa12.58□□□□□ -0.39
CCND1-201ENST00000227507 GGT7Q9UJ14 662 aa12.58□□□□□ -0.39
CCND1-201ENST00000227507 STK38LQ9Y2H1 464 aa12.58□□□□□ -0.39
CCND1-201ENST00000227507 MRPL11Q9Y3B7 192 aaKnown RBP12.58□□□□□ -0.39
CCND1-201ENST00000227507 FGFR1OPO95684 399 aaKnown RBP12.58□□□□□ -0.4
CCND1-201ENST00000227507 CDC25CP30307 473 aa12.58□□□□□ -0.4
CCND1-201ENST00000227507 TNNC1P63316 161 aa12.58□□□□□ -0.4
CCND1-201ENST00000227507 SGMS1Q86VZ5 419 aa12.58□□□□□ -0.4
CCND1-201ENST00000227507 DDX42Q86XP3 938 aaKnown RBP eCLIP12.58□□□□□ -0.4
CCND1-201ENST00000227507 AP1M1Q9BXS5 423 aa12.58□□□□□ -0.4
CCND1-201ENST00000227507 CD2APQ9Y5K6 639 aa12.58□□□□□ -0.4
CCND1-201ENST00000227507 MRC1P22897 1456 aa12.58□□□□□ -0.4
CCND1-201ENST00000227507 ATRNO75882 1429 aa12.58□□□□□ -0.4
CCND1-201ENST00000227507 GH2P01242 217 aa12.58□□□□□ -0.4
CCND1-201ENST00000227507 BMP3P12645 472 aa12.58□□□□□ -0.4
CCND1-201ENST00000227507 HOXA10P31260 410 aaPredicted RBP12.58□□□□□ -0.4
CCND1-201ENST00000227507 WDR59Q6PJI9 974 aa12.58□□□□□ -0.4
CCND1-201ENST00000227507 HHIPL2Q6UWX4 724 aa12.58□□□□□ -0.4
CCND1-201ENST00000227507 MYCLP12524 364 aaPredicted RBP12.58□□□□□ -0.4
CCND1-201ENST00000227507 LMNB1P20700 586 aa12.58□□□□□ -0.4
CCND1-201ENST00000227507 EEF1GP26641 437 aaKnown RBP12.58□□□□□ -0.4
CCND1-201ENST00000227507 SP4Q02446 784 aa12.58□□□□□ -0.4
CCND1-201ENST00000227507 CREG2Q8IUH2 290 aa12.58□□□□□ -0.4
CCND1-201ENST00000227507 CCDC170Q8IYT3 715 aa12.58□□□□□ -0.4
CCND1-201ENST00000227507 ATP6V1G3Q96LB4 118 aa12.58□□□□□ -0.4
CCND1-201ENST00000227507 LMO7Q8WWI1 1683 aa12.58□□□□□ -0.4
CCND1-201ENST00000227507 TRADDQ15628 312 aa12.57□□□□□ -0.4
CCND1-201ENST00000227507 CYB5D1Q6P9G0 228 aa12.57□□□□□ -0.4
CCND1-201ENST00000227507 KSR1Q8IVT5 923 aa12.57□□□□□ -0.4
CCND1-201ENST00000227507 CYFIP2Q96F07 1278 aa12.57□□□□□ -0.4
CCND1-201ENST00000227507 ZNF341Q9BYN7 854 aa12.57□□□□□ -0.4
CCND1-201ENST00000227507 GMNCA6NCL1 334 aa12.57□□□□□ -0.4
CCND1-201ENST00000227507 ANKS4BQ8N8V4 417 aa12.57□□□□□ -0.4
CCND1-201ENST00000227507 AMNQ9BXJ7 453 aa12.57□□□□□ -0.4
CCND1-201ENST00000227507 SEPT11Q9NVA2 429 aaKnown RBP12.57□□□□□ -0.4
CCND1-201ENST00000227507 PKD2L1Q9P0L9 805 aa12.57□□□□□ -0.4
CCND1-201ENST00000227507 BIN2Q9UBW5 565 aaPredicted RBP12.57□□□□□ -0.4
CCND1-201ENST00000227507 BICDL2A1A5D9 508 aa12.57□□□□□ -0.4
CCND1-201ENST00000227507 CCNT1O60563 726 aaKnown RBP12.57□□□□□ -0.4
CCND1-201ENST00000227507 SHOX2O60902 331 aaPredicted RBP12.57□□□□□ -0.4
CCND1-201ENST00000227507 RPS12P25398 132 aaKnown RBP12.57□□□□□ -0.4
CCND1-201ENST00000227507 KLRK1P26718 216 aa12.57□□□□□ -0.4
CCND1-201ENST00000227507 KIAA0753Q2KHM9 967 aa12.57□□□□□ -0.4
CCND1-201ENST00000227507 HAUS3Q68CZ6 603 aa12.57□□□□□ -0.4
CCND1-201ENST00000227507 SLC10A4Q96EP9 437 aa12.57□□□□□ -0.4
CCND1-201ENST00000227507 RNF26Q9BY78 433 aaPredicted RBP12.57□□□□□ -0.4
CCND1-201ENST00000227507 PSTPIP2Q9H939 334 aa12.57□□□□□ -0.4
CCND1-201ENST00000227507 PCDHA1Q9Y5I3 950 aa12.57□□□□□ -0.4
CCND1-201ENST00000227507 GRIN2DO15399 1336 aa12.57□□□□□ -0.4
CCND1-201ENST00000227507 INF2Q27J81 1249 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 VTI1AQ96AJ9 217 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 GOLPH3Q9H4A6 298 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 OPLAHO14841 1288 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 CTNND1O60716 968 aaKnown RBP12.56□□□□□ -0.4
CCND1-201ENST00000227507 SPDL1Q96EA4 605 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 WRNIP1Q96S55 665 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 SPATS2LQ9NUQ6 558 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms