RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 PSMC2P35998 433 aaKnown RBP13.52□□□□□ -0.25
TM9SF4-201ENST00000217315 SLC27A3Q5K4L6 730 aa13.52□□□□□ -0.25
TM9SF4-201ENST00000217315 PARVGQ9HBI0 331 aa13.52□□□□□ -0.25
TM9SF4-201ENST00000217315 RGL1Q9NZL6 768 aa13.52□□□□□ -0.25
TM9SF4-201ENST00000217315 DUSP10Q9Y6W6 482 aa13.52□□□□□ -0.25
TM9SF4-201ENST00000217315 PALMO75781 387 aa13.52□□□□□ -0.25
TM9SF4-201ENST00000217315 IBSPP21815 317 aaPredicted RBP13.52□□□□□ -0.25
TM9SF4-201ENST00000217315 GRB10Q13322 594 aa13.52□□□□□ -0.25
TM9SF4-201ENST00000217315 PRKG1Q13976 671 aa13.52□□□□□ -0.25
TM9SF4-201ENST00000217315 SEPT7Q16181 437 aaKnown RBP13.52□□□□□ -0.25
TM9SF4-201ENST00000217315 IL17AQ16552 155 aa13.52□□□□□ -0.25
TM9SF4-201ENST00000217315 MICALL1Q8N3F8 863 aa13.52□□□□□ -0.25
TM9SF4-201ENST00000217315 PPM1KQ8N3J5 372 aa13.52□□□□□ -0.25
TM9SF4-201ENST00000217315 FNBP1Q96RU3 617 aa13.52□□□□□ -0.25
TM9SF4-201ENST00000217315 DPH5Q9H2P9 285 aa13.52□□□□□ -0.25
TM9SF4-201ENST00000217315 CEP72Q9P209 647 aa13.52□□□□□ -0.25
TM9SF4-201ENST00000217315 ESYT2A0FGR8 921 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 TTLL12Q14166 644 aaPredicted RBP13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 XKR9Q5GH70 373 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 FAM102BQ5T8I3 360 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 CCDC50Q8IVM0 306 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 LRRC45Q96CN5 670 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 SUGT1Q9Y2Z0 365 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 BZW2Q9Y6E2 419 aaKnown RBP13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 SCN11AQ9UI33 1791 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 GOLGA6L7A0A1B0GV03 622 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 CTNNA2P26232 953 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 CEP85LQ5SZL2 805 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 SEL1L2Q5TEA6 688 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 CEP63Q96MT8 703 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 SCLT1Q96NL6 688 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 NAP1L3Q99457 506 aaPredicted RBP13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 SELENOSQ9BQE4 189 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 HSD3B7Q9H2F3 369 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 NDUFB10O96000 172 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 HNRNPH2P55795 449 aaKnown RBP13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 PPP1R7Q15435 360 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 ZNF384Q8TF68 577 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 EXOC4Q96A65 974 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 NACC1Q96RE7 527 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 LACRTQ9GZZ8 138 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 MTUS1Q9ULD2 1270 aa13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 PACSIN2Q9UNF0 486 aaPredicted RBP13.51□□□□□ -0.25
TM9SF4-201ENST00000217315 GAP43P17677 238 aa13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 USP11P51784 963 aa13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 USP14P54578 494 aa13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 KNOP1Q1ED39 458 aaKnown RBP13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 OSBPL9Q96SU4 736 aa13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 WDR11Q9BZH6 1224 aa13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 ZBED4O75132 1171 aa13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 NR3C1P04150 777 aa13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 CHRNA5P30532 468 aa13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 GNGT1P63211 74 aa13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 LLGL1Q15334 1064 aa13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 PPP4R3CPQ6ZMV5 832 aa13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 NLRX1Q86UT6 975 aa13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 SMARCA1P28370 1054 aa13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 FXR2P51116 673 aaKnown RBP eCLIP13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 NAALADL2Q58DX5 795 aa13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 OTUD6BQ8N6M0 293 aa13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 FAM20AQ96MK3 541 aa13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 IMPG2Q9BZV3 1241 aa13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 MTRF1LQ9UGC7 380 aaKnown RBP13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 FHOD1Q9Y613 1164 aa13.5□□□□□ -0.25
TM9SF4-201ENST00000217315 MAP2K1Q02750 393 aaPredicted RBP13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 UBL4BQ8N7F7 174 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 PICK1Q9NRD5 415 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 ESYT3A0FGR9 886 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 FERP16591 822 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 ACTN2P35609 894 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 PLA2G4AP47712 749 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 EPHB4P54760 987 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 MYL7Q01449 175 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 CALCOCO2Q13137 446 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 KRT71Q3SY84 523 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 PDXDC1Q6P996 788 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 SPATA20Q8TB22 786 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 BCAS4Q8TDM0 211 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 PNKPQ96T60 521 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 RASSF4Q9H2L5 321 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 SEMA6BQ9H3T3 888 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 EXOC7Q9UPT5 735 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 ARFGEF2Q9Y6D5 1785 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 C5P01031 1676 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 TBC1D8O95759 1140 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 DLATP10515 647 aaKnown RBP13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 CTNNA1P35221 906 aaKnown RBP13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 GOLGA5Q8TBA6 731 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 AP1M1Q9BXS5 423 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 KCND1Q9NSA2 647 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 SMARCAL1Q9NZC9 954 aa13.49□□□□□ -0.25
TM9SF4-201ENST00000217315 SF3A3Q12874 501 aaKnown RBP eCLIP13.48□□□□□ -0.254e-7■■■□□ 18.3
TM9SF4-201ENST00000217315 CCDC93Q567U6 631 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 CPLX4Q7Z7G2 160 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 SPATA4Q8NEY3 305 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 TNFRSF25Q93038 417 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 DYDC2Q96IM9 177 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 IFT74Q96LB3 600 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 ERGIC2Q96RQ1 377 aa13.48□□□□□ -0.25
TM9SF4-201ENST00000217315 RIOX1Q9H6W3 641 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms