RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 IGFBP4P22692 258 aa15□□□□□ -0.01
SIX4-201ENST00000216513 U2AF1L4Q8WU68 220 aaKnown RBP15□□□□□ -0.01
SIX4-201ENST00000216513 CCDC77Q9BR77 488 aa15□□□□□ -0.01
SIX4-201ENST00000216513 ZNF18P17022 549 aa15□□□□□ -0.01
SIX4-201ENST00000216513 TMCO4Q5TGY1 634 aa15□□□□□ -0.01
SIX4-201ENST00000216513 SFMBT2Q5VUG0 894 aa15□□□□□ -0.01
SIX4-201ENST00000216513 TBC1D31Q96DN5 1066 aa15□□□□□ -0.01
SIX4-201ENST00000216513 ATG4CQ96DT6 458 aa15□□□□□ -0.01
SIX4-201ENST00000216513 PRPF3O43395 683 aaKnown RBP15□□□□□ -0.01
SIX4-201ENST00000216513 CPT1AP50416 773 aa15□□□□□ -0.01
SIX4-201ENST00000216513 KRT76Q01546 638 aa15□□□□□ -0.01
SIX4-201ENST00000216513 KCNV1Q6PIU1 500 aa15□□□□□ -0.01
SIX4-201ENST00000216513 RRAGAQ7L523 313 aa15□□□□□ -0.01
SIX4-201ENST00000216513 NR2E3Q9Y5X4 410 aa15□□□□□ -0.01
SIX4-201ENST00000216513 MYO3AQ8NEV4 1616 aa15□□□□□ -0.01
SIX4-201ENST00000216513 PRELPP51888 382 aa15□□□□□ -0.01
SIX4-201ENST00000216513 PHLDB2Q86SQ0 1253 aa15□□□□□ -0.01
SIX4-201ENST00000216513 UBL4BQ8N7F7 174 aa15□□□□□ -0.01
SIX4-201ENST00000216513 SLC9A2Q9UBY0 812 aa15□□□□□ -0.01
SIX4-201ENST00000216513 KIF11P52732 1056 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 SMYD4Q8IYR2 804 aaPredicted RBP14.99□□□□□ -0.01
SIX4-201ENST00000216513 PGBD3Q8N328 593 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 AFG1LQ8WV93 481 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 TMEM63CQ9P1W3 806 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 STAP2Q9UGK3 403 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 FANCCQ00597 558 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 GBP6Q6ZN66 633 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 GRAMD1CQ8IYS0 662 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 PARVGQ9HBI0 331 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 PQBP1O60828 265 aaKnown RBP14.99□□□□□ -0.01
SIX4-201ENST00000216513 POLR2BP30876 1174 aaKnown RBP14.99□□□□□ -0.01
SIX4-201ENST00000216513 DEFB128Q7Z7B8 93 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 GABPB2Q8TAK5 448 aaPredicted RBP14.99□□□□□ -0.01
SIX4-201ENST00000216513 BHMT2Q9H2M3 363 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 ARFGAP3Q9NP61 516 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 CLIC4Q9Y696 253 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 AKR1B15C9JRZ8 316 aaPredicted RBP14.99□□□□□ -0.01
SIX4-201ENST00000216513 NDUFB10O96000 172 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 HS1BP3Q53T59 392 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 MLKLQ8NB16 471 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 MIS12Q9H081 205 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 PAXBP1Q9Y5B6 917 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 KDM6AO15550 1401 aaPredicted RBP14.99□□□□□ -0.01
SIX4-201ENST00000216513 LAD1O00515 517 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 TYW1BQ6NUM6 668 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 ARMCX2Q7L311 632 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 CNGA4Q8IV77 575 aa14.99□□□□□ -0.01
SIX4-201ENST00000216513 PFKFB1P16118 471 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 STAT1P42224 750 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 NT5C1BQ96P26 610 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 CARD6Q9BX69 1037 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 PLA2G12BQ9BX93 195 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 POLD4Q9HCU8 107 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 DLC1Q96QB1 1528 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 A6NJR5 290 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 CLDN3O15551 220 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 RPN1P04843 607 aaKnown RBP14.98□□□□□ -0.01
SIX4-201ENST00000216513 ELF2Q15723 593 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 STARD7Q9NQZ5 370 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 PCDHB7Q9Y5E2 793 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 PLA2G4BP0C869 781 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 IER5Q5VY09 327 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 CDCA5Q96FF9 252 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 DYDC2Q96IM9 177 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 TMEM206Q9H813 350 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 SLC38A10Q9HBR0 1119 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 STAT5BP51692 787 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 ZNF365Q70YC5 407 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 VCPKMTQ9H867 229 aa14.98□□□□□ -0.01
SIX4-201ENST00000216513 TADA2AO75478 443 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 CALCOCO2Q13137 446 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 TMED8Q6PL24 325 aaPredicted RBP14.97□□□□□ -0.01
SIX4-201ENST00000216513 DISP2A7MBM2 1401 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 SPDYE2BA6NHP3 402 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 BUB1O43683 1085 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 PGK2P07205 417 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 SPDYE6P0CI01 402 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 RAG1P15918 1043 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 CAPN2P17655 700 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 PSMC4P43686 418 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 PLCB4Q15147 1175 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 TEX2Q8IWB9 1127 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 UHMK1Q8TAS1 419 aaKnown RBP14.97□□□□□ -0.01
SIX4-201ENST00000216513 MEGF6O75095 1541 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 HUS1O60921 280 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 RPS6KA5O75582 802 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 ZNF653Q96CK0 615 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 TRPC7Q9HCX4 862 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 JPH1Q9HDC5 661 aaPredicted RBP14.97□□□□□ -0.01
SIX4-201ENST00000216513 LRRC7Q96NW7 1537 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 SRGAP2BP0DMP2 458 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 THPOP40225 353 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 HADHQ16836 314 aaKnown RBP14.97□□□□□ -0.01
SIX4-201ENST00000216513 TKFCQ3LXA3 575 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 ENAHQ8N8S7 591 aaPredicted RBP14.97□□□□□ -0.01
SIX4-201ENST00000216513 PPP1R12CQ9BZL4 782 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 ESYT2A0FGR8 921 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 GOLGA8SH3BPF8 625 aa14.97□□□□□ -0.01
SIX4-201ENST00000216513 GCLCP48506 637 aaPredicted RBP14.97□□□□□ -0.01
SIX4-201ENST00000216513 C12orf60Q5U649 245 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms