RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 GOLGA8RI6L899 631 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 DMTNQ08495 405 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 AOC3Q16853 763 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 PPP1R13BQ96KQ4 1090 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 LRRC4Q9HBW1 653 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 PRPSAP2O60256 369 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 NUGGCQ68CJ6 796 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 NDUFAF2Q8N183 169 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 ARHGAP10A1A4S6 786 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 E5RI56 91 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 COBLO75128 1261 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 NR1D1P20393 614 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 NFKBIAP25963 317 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 GUCY1A3Q02108 690 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 DHX9Q08211 1270 aaKnown RBP15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 KDM4CQ9H3R0 1056 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 CCDC195A0A1B0GUA6 201 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 CDO1Q16878 200 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 TBC1D1Q86TI0 1168 aaPredicted RBP15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 ZNF654Q8IZM8 581 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 ANKRD13CQ8N6S4 541 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 RABGGTAQ92696 567 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 XPOTO43592 962 aaKnown RBP15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 NR5A1Q13285 461 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 FAM47AQ5JRC9 791 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 RFX8Q6ZV50 586 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 MID2Q9UJV3 735 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 ABCC5O15440 1437 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 RASSF10A6NK89 507 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 ANXA13P27216 316 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 NNTQ13423 1086 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 MRPS26Q9BYN8 205 aaKnown RBP15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 FBLN1P23142 703 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 C8orf34Q49A92 452 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 AHI1Q8N157 1196 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 APPBP2Q92624 585 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 CNOT6LQ96LI5 555 aaKnown RBP15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 SLITRK6Q9H5Y7 841 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 JAK2O60674 1132 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 CA4P22748 312 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 SPARCL1Q14515 664 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 FGD2Q7Z6J4 655 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 ZFP42Q96MM3 310 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 TMEM161AQ9NX61 479 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 CENPUQ71F23 418 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 NCAPG2Q86XI2 1143 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 LARGE2Q8N3Y3 721 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 MRPL50Q8N5N7 158 aaKnown RBP15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 FAM227BQ96M60 508 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 SEL1LQ9UBV2 794 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 NSD2O96028 1365 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 FAM89AQ96GI7 184 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 GCNT4Q9P109 453 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 MAPKAPK5Q8IW41 473 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 COL4A3BPQ9Y5P4 624 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 ATP8B3O60423 1300 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 DTNBO60941 627 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 ZNF445P59923 1031 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 TSPY1Q01534 308 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 EPM2AIP1Q7L775 607 aaPredicted RBP15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 WDR75Q8IWA0 830 aaKnown RBP15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 SLC35F6Q8N357 371 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 ZNF507Q8TCN5 953 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 ULK4Q96C45 1275 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 XAGE2Q96GT9 111 aa15.68■□□□□ 0.1
SPTLC2-201ENST00000216484 ALAS1P13196 640 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 PDE6BP35913 854 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 KRT72Q14CN4 511 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 DNAJC24Q6P3W2 148 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 A0A087WUV0 522 aaPredicted RBP15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 PGRMC1O00264 195 aaKnown RBP15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 ARL13BQ3SXY8 428 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 DPP8Q6V1X1 898 aaPredicted RBP15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 ANO5Q75V66 913 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 C8orf58Q8NAV2 365 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 ELAC2Q9BQ52 826 aaKnown RBP15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 ZFP69BQ9UJL9 534 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 DYTNA2CJ06 578 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 COPS2P61201 443 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 TEKT3Q9BXF9 490 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 FTOQ9C0B1 505 aaKnown RBP eCLIP15.67■□□□□ 0.17e-10■□□□□ 8.1
SPTLC2-201ENST00000216484 HAUS4Q9H6D7 363 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 PAPOLBQ9NRJ5 636 aaKnown RBP15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 MAP4P27816 1152 aaKnown RBP15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 TFAMQ00059 246 aaKnown RBP15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 PRG3Q9Y2Y8 225 aaPredicted RBP15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 NBPF26B4DH59 902 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 BEND6Q5SZJ8 279 aaPredicted RBP15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 RARS2Q5T160 578 aaKnown RBP15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 NBPF15Q8N660 670 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 DNAJC17Q9NVM6 304 aaKnown RBP15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 FANCLQ9NW38 375 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 NEMP1O14524 444 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 WASHC5Q12768 1159 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 FAM160B1Q5W0V3 765 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 FAF2Q96CS3 445 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 MRPL47Q9HD33 250 aaKnown RBP15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 GINM1Q9NU53 330 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 CCDC78A2IDD5 438 aa15.67■□□□□ 0.1
SPTLC2-201ENST00000216484 TAF5LO75529 589 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms