RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 PRPHP41219 470 aa13.8□□□□□ -0.2
SNU13-201ENST00000215956 CDC37Q16543 378 aaPredicted RBP13.8□□□□□ -0.2
SNU13-201ENST00000215956 TYW1BQ6NUM6 668 aa13.8□□□□□ -0.2
SNU13-201ENST00000215956 CKAP2LQ8IYA6 745 aa13.8□□□□□ -0.2
SNU13-201ENST00000215956 PCSK9Q8NBP7 692 aaKnown RBP13.8□□□□□ -0.2
SNU13-201ENST00000215956 PPP1R12CQ9BZL4 782 aa13.8□□□□□ -0.2
SNU13-201ENST00000215956 PNMA2Q9UL42 364 aa13.8□□□□□ -0.2
SNU13-201ENST00000215956 A0A0U1RQG5 324 aaPredicted RBP13.79□□□□□ -0.2
SNU13-201ENST00000215956 ASGR1P07306 291 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 STAT2P52630 851 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 IRX5P78411 483 aaPredicted RBP13.79□□□□□ -0.2
SNU13-201ENST00000215956 PTGDRQ13258 359 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 EARS2Q5JPH6 523 aaKnown RBP13.79□□□□□ -0.2
SNU13-201ENST00000215956 FAM83BQ5T0W9 1011 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 TTBK2Q6IQ55 1244 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 MAMDC4Q6UXC1 1216 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 FAM126BQ8IXS8 530 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 CNNM3Q8NE01 707 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 VTI1AQ96AJ9 217 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 CPVLQ9H3G5 476 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 MYH4Q9Y623 1939 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 TMEM232C9JQI7 657 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 ARVCFO00192 962 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 TLR3O15455 904 aaKnown RBP13.79□□□□□ -0.2
SNU13-201ENST00000215956 GCFC2P16383 781 aaKnown RBP13.79□□□□□ -0.2
SNU13-201ENST00000215956 MCM7P33993 719 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 SLC16A2P36021 539 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 AP3B2Q13367 1082 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 INF2Q27J81 1249 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 QRICH1Q2TAL8 776 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 SNRNP48Q6IEG0 339 aaKnown RBP13.79□□□□□ -0.2
SNU13-201ENST00000215956 DTHD1Q6ZMT9 781 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 KRBA2Q6ZNG9 492 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 RASGRP2Q7LDG7 609 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 FBXO11Q86XK2 927 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 HERVK_113Q902F9 699 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 AK8Q96MA6 479 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 CLIC6Q96NY7 704 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 TEX13BQ9BXU2 312 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 CSRNP2Q9H175 543 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 NKX2-4Q9H2Z4 354 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 PSTPIP2Q9H939 334 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 SPC25Q9HBM1 224 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 KIAA1468Q9P260 1216 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 FEM1BQ9UK73 627 aa13.79□□□□□ -0.2
SNU13-201ENST00000215956 DNAJC25-GNG10A0A024R161 153 aa13.78□□□□□ -0.2
SNU13-201ENST00000215956 FAM205CA6NFA0 338 aa13.78□□□□□ -0.2
SNU13-201ENST00000215956 ADCY6O43306 1168 aa13.78□□□□□ -0.2
SNU13-201ENST00000215956 ACVR2BQ13705 512 aa13.78□□□□□ -0.2
SNU13-201ENST00000215956 ZNF467Q7Z7K2 595 aaPredicted RBP13.78□□□□□ -0.2
SNU13-201ENST00000215956 CEP57L1Q8IYX8 460 aa13.78□□□□□ -0.2
SNU13-201ENST00000215956 RNF214Q8ND24 703 aa13.78□□□□□ -0.2
SNU13-201ENST00000215956 UPF3AQ9H1J1 476 aaKnown RBP13.78□□□□□ -0.2
SNU13-201ENST00000215956 MTIF3Q9H2K0 278 aaKnown RBP13.78□□□□□ -0.2
SNU13-201ENST00000215956 SLC28A3Q9HAS3 691 aa13.78□□□□□ -0.2
SNU13-201ENST00000215956 IL23AQ9NPF7 189 aa13.78□□□□□ -0.2
SNU13-201ENST00000215956 CXXC1Q9P0U4 656 aaPredicted RBP13.78□□□□□ -0.2
SNU13-201ENST00000215956 PCDHA1Q9Y5I3 950 aa13.78□□□□□ -0.2
SNU13-201ENST00000215956 MRVI1Q9Y6F6 885 aa13.78□□□□□ -0.2
SNU13-201ENST00000215956 PRRC2BQ5JSZ5 2229 aaKnown RBP13.78□□□□□ -0.2
SNU13-201ENST00000215956 FOSP01100 380 aaPredicted RBP13.77□□□□□ -0.21
SNU13-201ENST00000215956 CYP2C18P33260 490 aa13.77□□□□□ -0.21
SNU13-201ENST00000215956 GJA9P57773 515 aa13.77□□□□□ -0.21
SNU13-201ENST00000215956 RASGRP4Q8TDF6 673 aa13.77□□□□□ -0.21
SNU13-201ENST00000215956 NECAB3Q96P71 396 aaPredicted RBP13.77□□□□□ -0.21
SNU13-201ENST00000215956 SLF1Q9BQI6 1058 aa13.77□□□□□ -0.21
SNU13-201ENST00000215956 RAB34Q9BZG1 259 aa13.77□□□□□ -0.21
SNU13-201ENST00000215956 TSPYL2Q9H2G4 693 aaPredicted RBP13.77□□□□□ -0.21
SNU13-201ENST00000215956 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.77□□□□□ -0.21
SNU13-201ENST00000215956 YBX2Q9Y2T7 364 aaKnown RBP13.77□□□□□ -0.21
SNU13-201ENST00000215956 RIPK3Q9Y572 518 aa13.77□□□□□ -0.21
SNU13-201ENST00000215956 NEMFO60524 1076 aa13.76□□□□□ -0.21
SNU13-201ENST00000215956 CD4P01730 458 aa13.76□□□□□ -0.21
SNU13-201ENST00000215956 OR52Z1P0C646 297 aa13.76□□□□□ -0.21
SNU13-201ENST00000215956 TPM4P67936 248 aa13.76□□□□□ -0.21
SNU13-201ENST00000215956 CCDC144BQ3MJ40 725 aa13.76□□□□□ -0.21
SNU13-201ENST00000215956 GNASQ5JWF2 1037 aa13.76□□□□□ -0.21
SNU13-201ENST00000215956 TBCKQ8TEA7 893 aa13.76□□□□□ -0.21
SNU13-201ENST00000215956 TRIM44Q96DX7 344 aaPredicted RBP13.76□□□□□ -0.21
SNU13-201ENST00000215956 PPP1R9BQ96SB3 815 aa13.76□□□□□ -0.21
SNU13-201ENST00000215956 ABHD16BQ9H3Z7 469 aa13.76□□□□□ -0.21
SNU13-201ENST00000215956 VWA3AA6NCI4 1184 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 GOLGA6L19H0YKK7 550 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 CCNT1O60563 726 aaKnown RBP13.75□□□□□ -0.21
SNU13-201ENST00000215956 SMC2O95347 1197 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 FGBP02675 491 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 FDX1P10109 184 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 CLK2P49760 499 aaKnown RBP13.75□□□□□ -0.21
SNU13-201ENST00000215956 ZNF165P49910 485 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 TMEM266Q2M3C6 531 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 LETM2Q2VYF4 491 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 ANO6Q4KMQ2 910 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 JAKMIP3Q5VZ66 844 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 PPP4R3AQ6IN85 833 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 MOXD1Q6UVY6 613 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 TRIML1Q8N9V2 468 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 IQUBQ8NA54 791 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 NUP88Q99567 741 aaPredicted RBP13.75□□□□□ -0.21
SNU13-201ENST00000215956 C1QTNF1Q9BXJ1 281 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 EHMT1Q9H9B1 1298 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms