RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 SPZ1Q9BXG8 430 aa16.59■□□□□ 0.25
EFNB1-201ENST00000204961 GOPCQ9HD26 462 aa16.59■□□□□ 0.25
EFNB1-201ENST00000204961 DOT1LQ8TEK3 1739 aa16.59■□□□□ 0.25
EFNB1-201ENST00000204961 RBAK-RBAKDNI3L0D1 243 aa16.59■□□□□ 0.25
EFNB1-201ENST00000204961 GFPT2O94808 682 aa16.59■□□□□ 0.25
EFNB1-201ENST00000204961 EEF2P13639 858 aaKnown RBP16.59■□□□□ 0.25
EFNB1-201ENST00000204961 RNF187Q5TA31 235 aaPredicted RBP16.59■□□□□ 0.25
EFNB1-201ENST00000204961 U2AF1L4Q8WU68 220 aaKnown RBP16.59■□□□□ 0.25
EFNB1-201ENST00000204961 PPANQ9NQ55 473 aaKnown RBP16.59■□□□□ 0.25
EFNB1-201ENST00000204961 FKBP3Q00688 224 aaKnown RBP16.58■□□□□ 0.25
EFNB1-201ENST00000204961 ZNF211Q13398 564 aaPredicted RBP16.58■□□□□ 0.25
EFNB1-201ENST00000204961 CT47A1Q5JQC4 288 aaPredicted RBP16.58■□□□□ 0.25
EFNB1-201ENST00000204961 TAF4BQ92750 862 aa16.58■□□□□ 0.25
EFNB1-201ENST00000204961 AK8Q96MA6 479 aa16.58■□□□□ 0.25
EFNB1-201ENST00000204961 HSF2BPO75031 334 aa16.58■□□□□ 0.24
EFNB1-201ENST00000204961 POLD1P28340 1107 aa16.58■□□□□ 0.24
EFNB1-201ENST00000204961 MRPL12P52815 198 aaKnown RBP16.58■□□□□ 0.24
EFNB1-201ENST00000204961 MEA1Q16626 185 aa16.58■□□□□ 0.24
EFNB1-201ENST00000204961 KLHDC7AQ5VTJ3 777 aa16.58■□□□□ 0.24
EFNB1-201ENST00000204961 PDXDC1Q6P996 788 aa16.58■□□□□ 0.24
EFNB1-201ENST00000204961 CELF4Q9BZC1 486 aaKnown RBP16.58■□□□□ 0.24
EFNB1-201ENST00000204961 GPR75-ASB3A0A0A6YYF3 556 aa16.58■□□□□ 0.24
EFNB1-201ENST00000204961 TLDC2A0PJX2 215 aa16.58■□□□□ 0.24
EFNB1-201ENST00000204961 TTLL1O95922 423 aa16.58■□□□□ 0.24
EFNB1-201ENST00000204961 NMT1P30419 496 aaKnown RBP16.58■□□□□ 0.24
EFNB1-201ENST00000204961 COG2Q14746 738 aa16.58■□□□□ 0.24
EFNB1-201ENST00000204961 LRRC55Q6ZSA7 311 aa16.58■□□□□ 0.24
EFNB1-201ENST00000204961 CCDC170Q8IYT3 715 aa16.58■□□□□ 0.24
EFNB1-201ENST00000204961 PCIF1Q9H4Z3 704 aa16.58■□□□□ 0.24
EFNB1-201ENST00000204961 CLRN2A0PK11 232 aa16.57■□□□□ 0.24
EFNB1-201ENST00000204961 TRIM49P0CI25 452 aa16.57■□□□□ 0.24
EFNB1-201ENST00000204961 TRIM49CP0CI26 452 aa16.57■□□□□ 0.24
EFNB1-201ENST00000204961 PTK2Q05397 1052 aa16.57■□□□□ 0.24
EFNB1-201ENST00000204961 ASIC2Q16515 512 aa16.57■□□□□ 0.24
EFNB1-201ENST00000204961 TTC31Q49AM3 519 aaPredicted RBP16.57■□□□□ 0.24
EFNB1-201ENST00000204961 CFAP58Q5T655 872 aa16.57■□□□□ 0.24
EFNB1-201ENST00000204961 ZIM3Q96PE6 472 aa16.57■□□□□ 0.24
EFNB1-201ENST00000204961 MTMR9Q96QG7 549 aa16.57■□□□□ 0.24
EFNB1-201ENST00000204961 CEP85LQ5SZL2 805 aa16.57■□□□□ 0.24
EFNB1-201ENST00000204961 HAUS3Q68CZ6 603 aa16.57■□□□□ 0.24
EFNB1-201ENST00000204961 SLFN13Q68D06 897 aa16.57■□□□□ 0.24
EFNB1-201ENST00000204961 BAP1Q92560 729 aa16.57■□□□□ 0.24
EFNB1-201ENST00000204961 ERGIC2Q96RQ1 377 aa16.57■□□□□ 0.24
EFNB1-201ENST00000204961 STIM2Q9P246 746 aa16.57■□□□□ 0.24
EFNB1-201ENST00000204961 DDTLA6NHG4 134 aaPredicted RBP16.57■□□□□ 0.24
EFNB1-201ENST00000204961 ITGA4P13612 1032 aa16.57■□□□□ 0.24
EFNB1-201ENST00000204961 CDC37Q16543 378 aaPredicted RBP16.57■□□□□ 0.24
EFNB1-201ENST00000204961 SCFD1Q8WVM8 642 aa16.57■□□□□ 0.24
EFNB1-201ENST00000204961 UBLCP1Q8WVY7 318 aaPredicted RBP16.57■□□□□ 0.24
EFNB1-201ENST00000204961 P2RX7Q99572 595 aaKnown RBP16.57■□□□□ 0.24
EFNB1-201ENST00000204961 ZNF543Q08ER8 600 aa16.56■□□□□ 0.24
EFNB1-201ENST00000204961 ZNF746Q6NUN9 644 aaPredicted RBP16.56■□□□□ 0.24
EFNB1-201ENST00000204961 PACS2Q86VP3 889 aa16.56■□□□□ 0.24
EFNB1-201ENST00000204961 CCDC65Q8IXS2 484 aa16.56■□□□□ 0.24
EFNB1-201ENST00000204961 CAPS2Q9BXY5 557 aa16.56■□□□□ 0.24
EFNB1-201ENST00000204961 HOMER2Q9NSB8 354 aa16.56■□□□□ 0.24
EFNB1-201ENST00000204961 NNTQ13423 1086 aa16.56■□□□□ 0.24
EFNB1-201ENST00000204961 CDC42EP5Q6NZY7 148 aa16.56■□□□□ 0.24
EFNB1-201ENST00000204961 TDRD3Q9H7E2 651 aaKnown RBP16.56■□□□□ 0.24
EFNB1-201ENST00000204961 HDAC9Q9UKV0 1011 aa16.56■□□□□ 0.24
EFNB1-201ENST00000204961 PNMA6FA0A0J9YX94 578 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 NDUFAB1O14561 156 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 CETN3O15182 167 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 PRPHP41219 470 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 SP4Q02446 784 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 GUF1Q8N442 669 aaKnown RBP16.55■□□□□ 0.24
EFNB1-201ENST00000204961 MYCT1Q8N699 235 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 DNAJC19Q96DA6 116 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 ANO3Q9BYT9 981 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 ACP6Q9NPH0 428 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 FAM184BQ9ULE4 1060 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 TISP43B9A030 160 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 H0YHG0 523 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 LAD1O00515 517 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 NOL4O94818 638 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 SLC20A2Q08357 652 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 CFAP221Q4G0U5 840 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 WDR93Q6P2C0 686 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 MIGA2Q7L4E1 593 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 CATSPER3Q86XQ3 398 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 RETREG2Q8NC44 543 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 AMACRQ9UHK6 382 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 AJAP1Q9UKB5 411 aaPredicted RBP16.55■□□□□ 0.24
EFNB1-201ENST00000204961 RAD51CO43502 376 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 FBXW10Q5XX13 1052 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 IQCEQ6IPM2 695 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 AADACL2Q6P093 401 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 RBM17Q96I25 401 aaKnown RBP16.55■□□□□ 0.24
EFNB1-201ENST00000204961 REEP2Q9BRK0 252 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 CCDC113Q9H0I3 377 aa16.55■□□□□ 0.24
EFNB1-201ENST00000204961 SPDYE3A6NKU9 549 aa16.54■□□□□ 0.24
EFNB1-201ENST00000204961 TCP10L2B9ZVM9 353 aa16.54■□□□□ 0.24
EFNB1-201ENST00000204961 IRAK1P51617 712 aa16.54■□□□□ 0.24
EFNB1-201ENST00000204961 CERKLQ49MI3 558 aaPredicted RBP16.54■□□□□ 0.24
EFNB1-201ENST00000204961 GALNT17Q6IS24 598 aa16.54■□□□□ 0.24
EFNB1-201ENST00000204961 DAAM2Q86T65 1068 aa16.54■□□□□ 0.24
EFNB1-201ENST00000204961 LZTS2Q9BRK4 669 aa16.54■□□□□ 0.24
EFNB1-201ENST00000204961 ARMCX3Q9UH62 379 aaPredicted RBP16.54■□□□□ 0.24
EFNB1-201ENST00000204961 FGFR1OPO95684 399 aaKnown RBP16.54■□□□□ 0.24
EFNB1-201ENST00000204961 CALCAP01258 141 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms