RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 ZHX3Q9H4I2 956 aa18.82■□□□□ 0.6
PHGDH-229ENST00000641891 PUF60Q9UHX1 559 aaKnown RBP18.82■□□□□ 0.6
PHGDH-229ENST00000641891 HDAC9Q9UKV0 1011 aa18.82■□□□□ 0.6
PHGDH-229ENST00000641891 SCAF8Q9UPN6 1271 aaKnown RBP18.82■□□□□ 0.6
PHGDH-229ENST00000641891 A0A1W2PQJ5 194 aa18.82■□□□□ 0.6
PHGDH-229ENST00000641891 KRT18P05783 430 aaKnown RBP18.82■□□□□ 0.6
PHGDH-229ENST00000641891 PLEKP08567 350 aaPredicted RBP18.82■□□□□ 0.6
PHGDH-229ENST00000641891 FIGNQ5HY92 759 aa18.82■□□□□ 0.6
PHGDH-229ENST00000641891 HAUS3Q68CZ6 603 aa18.82■□□□□ 0.6
PHGDH-229ENST00000641891 NAPGQ99747 312 aaPredicted RBP18.82■□□□□ 0.6
PHGDH-229ENST00000641891 GLIS2Q9BZE0 524 aaPredicted RBP18.82■□□□□ 0.6
PHGDH-229ENST00000641891 MMRN2Q9H8L6 949 aa18.82■□□□□ 0.6
PHGDH-229ENST00000641891 ZNHIT6Q9NWK9 470 aaKnown RBP18.82■□□□□ 0.6
PHGDH-229ENST00000641891 CDC23Q9UJX2 597 aa18.82■□□□□ 0.6
PHGDH-229ENST00000641891 VAV3Q9UKW4 847 aa18.82■□□□□ 0.6
PHGDH-229ENST00000641891 RCCD1A6NED2 376 aa18.81■□□□□ 0.6
PHGDH-229ENST00000641891 TRAF5O00463 557 aa18.81■□□□□ 0.6
PHGDH-229ENST00000641891 TBX3O15119 743 aa18.81■□□□□ 0.6
PHGDH-229ENST00000641891 CFBP00751 764 aa18.81■□□□□ 0.6
PHGDH-229ENST00000641891 CIITAP33076 1130 aa18.81■□□□□ 0.6
PHGDH-229ENST00000641891 CYP4A11Q02928 519 aa18.81■□□□□ 0.6
PHGDH-229ENST00000641891 MCTP2Q6DN12 878 aa18.81■□□□□ 0.6
PHGDH-229ENST00000641891 SCFD1Q8WVM8 642 aa18.81■□□□□ 0.6
PHGDH-229ENST00000641891 GOPCQ9HD26 462 aa18.81■□□□□ 0.6
PHGDH-229ENST00000641891 ABCB11O95342 1321 aa18.81■□□□□ 0.6
PHGDH-229ENST00000641891 ZSCAN20P17040 1043 aaPredicted RBP18.81■□□□□ 0.6
PHGDH-229ENST00000641891 ZNF76P36508 570 aa18.81■□□□□ 0.6
PHGDH-229ENST00000641891 CASP5P51878 434 aa18.81■□□□□ 0.6
PHGDH-229ENST00000641891 PIK3CDO00329 1044 aa18.8■□□□□ 0.6
PHGDH-229ENST00000641891 EML1O00423 815 aa18.8■□□□□ 0.6
PHGDH-229ENST00000641891 RPA1P27694 616 aa18.8■□□□□ 0.6
PHGDH-229ENST00000641891 UBXN2AP68543 259 aa18.8■□□□□ 0.6
PHGDH-229ENST00000641891 FKBP3Q00688 224 aaKnown RBP18.8■□□□□ 0.6
PHGDH-229ENST00000641891 CYP27A1Q02318 531 aa18.8■□□□□ 0.6
PHGDH-229ENST00000641891 ERMNQ8TAM6 284 aa18.8■□□□□ 0.6
PHGDH-229ENST00000641891 SMCR8Q8TEV9 937 aaPredicted RBP18.8■□□□□ 0.6
PHGDH-229ENST00000641891 GOLGA1Q92805 767 aa18.8■□□□□ 0.6
PHGDH-229ENST00000641891 FAM20AQ96MK3 541 aa18.8■□□□□ 0.6
PHGDH-229ENST00000641891 WDR18Q9BV38 432 aa18.8■□□□□ 0.6
PHGDH-229ENST00000641891 TANGO6Q9C0B7 1094 aa18.8■□□□□ 0.6
PHGDH-229ENST00000641891 SYNPO2Q9UMS6 1093 aa18.8■□□□□ 0.6
PHGDH-229ENST00000641891 COL4A3BPQ9Y5P4 624 aa18.8■□□□□ 0.6
PHGDH-229ENST00000641891 SHTN1A0MZ66 631 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 FRMD3A2A2Y4 597 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 SLC26A4O43511 780 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 CYLC1P35663 651 aaPredicted RBP18.79■□□□□ 0.6
PHGDH-229ENST00000641891 GIT2Q14161 759 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 CCDC40Q4G0X9 1142 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 CCDC122Q5T0U0 273 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 SRGAP1Q7Z6B7 1085 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 KIAA1328Q86T90 577 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 ZFP91Q96JP5 570 aaPredicted RBP18.79■□□□□ 0.6
PHGDH-229ENST00000641891 LACRTQ9GZZ8 138 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 KCTD10Q9H3F6 313 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 POLD4Q9HCU8 107 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 MYO1AQ9UBC5 1043 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 IGLV3-22A0A075B6J6 115 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 CYP3A4P08684 503 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 HOXA7P31268 230 aaPredicted RBP18.79■□□□□ 0.6
PHGDH-229ENST00000641891 CHMP4BP1P59074 171 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 DEFB132Q7Z7B7 95 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 JAKMIP2Q96AA8 810 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 REEP2Q9BRK0 252 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 HAUS4Q9H6D7 363 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 BCAS3Q9H6U6 928 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 EMILIN3Q9NT22 766 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 FBXO28Q9NVF7 368 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 RGL1Q9NZL6 768 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 DNM3Q9UQ16 869 aa18.79■□□□□ 0.6
PHGDH-229ENST00000641891 ZNF263O14978 683 aa18.78■□□□□ 0.6
PHGDH-229ENST00000641891 SEC31AO94979 1220 aaKnown RBP18.78■□□□□ 0.6
PHGDH-229ENST00000641891 KCNMA1Q12791 1236 aa18.78■□□□□ 0.6
PHGDH-229ENST00000641891 FOXR2Q6PJQ5 311 aa18.78■□□□□ 0.6
PHGDH-229ENST00000641891 KRT26Q7Z3Y9 468 aa18.78■□□□□ 0.6
PHGDH-229ENST00000641891 RANBP17Q9H2T7 1088 aaKnown RBP18.78■□□□□ 0.6
PHGDH-229ENST00000641891 KIF13BQ9NQT8 1826 aa18.78■□□□□ 0.6
PHGDH-229ENST00000641891 LRRC53A6NM62 1247 aa18.78■□□□□ 0.6
PHGDH-229ENST00000641891 RSPH10B2B2RC85 870 aa18.78■□□□□ 0.6
PHGDH-229ENST00000641891 EIF3CLB5ME19 914 aaKnown RBP18.78■□□□□ 0.6
PHGDH-229ENST00000641891 ENC1O14682 589 aa18.78■□□□□ 0.6
PHGDH-229ENST00000641891 RSPH10BP0C881 870 aa18.78■□□□□ 0.6
PHGDH-229ENST00000641891 KRT83P78385 493 aa18.78■□□□□ 0.6
PHGDH-229ENST00000641891 SFR1Q86XK3 245 aa18.78■□□□□ 0.6
PHGDH-229ENST00000641891 CCDC170Q8IYT3 715 aa18.78■□□□□ 0.6
PHGDH-229ENST00000641891 GPR161Q8N6U8 529 aaKnown RBP18.78■□□□□ 0.6
PHGDH-229ENST00000641891 SYT2Q8N9I0 419 aaPredicted RBP18.78■□□□□ 0.6
PHGDH-229ENST00000641891 EIF3CQ99613 913 aaKnown RBP18.78■□□□□ 0.6
PHGDH-229ENST00000641891 EIF2AK1Q9BQI3 630 aaKnown RBP18.78■□□□□ 0.6
PHGDH-229ENST00000641891 VCPKMTQ9H867 229 aa18.78■□□□□ 0.6
PHGDH-229ENST00000641891 ARHGAP20Q9P2F6 1191 aa18.78■□□□□ 0.6
PHGDH-229ENST00000641891 DUSP10Q9Y6W6 482 aa18.78■□□□□ 0.6
PHGDH-229ENST00000641891 PITPNM2Q9BZ72 1349 aa18.77■□□□□ 0.6
PHGDH-229ENST00000641891 AMPD2Q01433 879 aa18.77■□□□□ 0.6
PHGDH-229ENST00000641891 NBPF9Q3BBW0 867 aa18.77■□□□□ 0.6
PHGDH-229ENST00000641891 GRIPAP1Q4V328 841 aa18.77■□□□□ 0.6
PHGDH-229ENST00000641891 RRAGAQ7L523 313 aa18.77■□□□□ 0.6
PHGDH-229ENST00000641891 NIM1KQ8IY84 436 aa18.77■□□□□ 0.6
PHGDH-229ENST00000641891 RABGGTAQ92696 567 aa18.77■□□□□ 0.6
PHGDH-229ENST00000641891 PARD6BQ9BYG5 372 aa18.77■□□□□ 0.6
PHGDH-229ENST00000641891 FAM53CQ9NYF3 392 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms