RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 CAVIN4Q5BKX8 364 aa15.07■□□□□ 0
SCARB2-227ENST00000640957 PRMT1Q99873 361 aaKnown RBP15.07■□□□□ 0
SCARB2-227ENST00000640957 LSM14BQ9BX40 385 aaKnown RBP15.07■□□□□ 0
SCARB2-227ENST00000640957 CAMTA1Q9Y6Y1 1673 aa15.07■□□□□ 0
SCARB2-227ENST00000640957 CCNT1O60563 726 aaKnown RBP15.07■□□□□ 0
SCARB2-227ENST00000640957 TLR2O60603 784 aa15.07■□□□□ 0
SCARB2-227ENST00000640957 RTN2O75298 545 aa15.07■□□□□ 0
SCARB2-227ENST00000640957 CABP7Q86V35 215 aa15.07■□□□□ 0
SCARB2-227ENST00000640957 SPATS2Q86XZ4 545 aaKnown RBP15.07■□□□□ 0
SCARB2-227ENST00000640957 FMNL3Q8IVF7 1028 aa15.07■□□□□ 0
SCARB2-227ENST00000640957 TSPY2A6NKD2 308 aa15.06■□□□□ 0
SCARB2-227ENST00000640957 KRIT1O00522 736 aa15.06■□□□□ 0
SCARB2-227ENST00000640957 MMEP08473 750 aa15.06■□□□□ 0
SCARB2-227ENST00000640957 YTHDF3Q7Z739 585 aaKnown RBP15.06■□□□□ 0
SCARB2-227ENST00000640957 CCT6BQ92526 530 aa15.06■□□□□ 0
SCARB2-227ENST00000640957 CHORDC1Q9UHD1 332 aaPredicted RBP15.06■□□□□ 0
SCARB2-227ENST00000640957 PDHA1P08559 390 aa15.06■□□□□ 0
SCARB2-227ENST00000640957 GLE1Q53GS7 698 aaKnown RBP15.06■□□□□ 0
SCARB2-227ENST00000640957 SOGA3Q5TF21 947 aa15.06■□□□□ 0
SCARB2-227ENST00000640957 TLDC1Q6P9B6 456 aa15.06■□□□□ 0
SCARB2-227ENST00000640957 BZW1Q7L1Q6 419 aaKnown RBP15.06■□□□□ 0
SCARB2-227ENST00000640957 ZNF483Q8TF39 744 aaPredicted RBP15.06■□□□□ 0
SCARB2-227ENST00000640957 C8orf37Q96NL8 207 aa15.06■□□□□ 0
SCARB2-227ENST00000640957 GPR101Q96P66 508 aaPredicted RBP15.06■□□□□ 0
SCARB2-227ENST00000640957 TRIM9Q9C026 710 aa15.06■□□□□ 0
SCARB2-227ENST00000640957 ZNF211Q13398 564 aaPredicted RBP15.05■□□□□ 0
SCARB2-227ENST00000640957 RPS6KA1Q15418 735 aa15.05■□□□□ 0
SCARB2-227ENST00000640957 FAM47EQ6ZV65 393 aa15.05■□□□□ 0
SCARB2-227ENST00000640957 TMTC3Q6ZXV5 915 aa15.05■□□□□ 0
SCARB2-227ENST00000640957 SLC51AQ86UW1 340 aa15.05■□□□□ 0
SCARB2-227ENST00000640957 ERICH1Q86X53 443 aa15.05■□□□□ 0
SCARB2-227ENST00000640957 BLIDQ8IZY5 108 aa15.05■□□□□ 0
SCARB2-227ENST00000640957 TMTC2Q8N394 836 aa15.05■□□□□ 0
SCARB2-227ENST00000640957 GLG1Q92896 1179 aa15.05■□□□□ 0
SCARB2-227ENST00000640957 ZNF570Q96NI8 536 aa15.05■□□□□ 0
SCARB2-227ENST00000640957 DNAJC17Q9NVM6 304 aaKnown RBP15.05■□□□□ 0
SCARB2-227ENST00000640957 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.05■□□□□ 0
SCARB2-227ENST00000640957 ARPP21Q9UBL0 812 aaPredicted RBP15.05■□□□□ 0
SCARB2-227ENST00000640957 C5P01031 1676 aa15.05■□□□□ 0
SCARB2-227ENST00000640957 LOC102724428A0A0B4J2F2 783 aa15.05■□□□□ -0
SCARB2-227ENST00000640957 TRAF5O00463 557 aa15.05■□□□□ -0
SCARB2-227ENST00000640957 ECHS1P30084 290 aa15.05■□□□□ -0
SCARB2-227ENST00000640957 SIK1P57059 783 aa15.05■□□□□ -0
SCARB2-227ENST00000640957 INHBEP58166 350 aa15.05■□□□□ -0
SCARB2-227ENST00000640957 DAAM2Q86T65 1068 aa15.05■□□□□ -0
SCARB2-227ENST00000640957 CCDC25Q86WR0 208 aa15.05■□□□□ -0
SCARB2-227ENST00000640957 ARFGAP2Q8N6H7 521 aa15.05■□□□□ -0
SCARB2-227ENST00000640957 USP38Q8NB14 1042 aa15.05■□□□□ -0
SCARB2-227ENST00000640957 RNF41Q9H4P4 317 aaPredicted RBP15.05■□□□□ -0
SCARB2-227ENST00000640957 ACTR5Q9H9F9 607 aaPredicted RBP15.05■□□□□ -0
SCARB2-227ENST00000640957 PNMA3Q9UL41 463 aa15.05■□□□□ -0
SCARB2-227ENST00000640957 SIK3Q9Y2K2 1263 aa15.05■□□□□ -0
SCARB2-227ENST00000640957 GRID2IPA4D2P6 1211 aa15.05■□□□□ -0
SCARB2-227ENST00000640957 DRD4P21917 467 aa15.05■□□□□ -0
SCARB2-227ENST00000640957 MRPL12P52815 198 aaKnown RBP15.05■□□□□ -0
SCARB2-227ENST00000640957 SPTY2D1Q68D10 685 aaPredicted RBP15.05■□□□□ -0
SCARB2-227ENST00000640957 PPP4R3AQ6IN85 833 aa15.05■□□□□ -0
SCARB2-227ENST00000640957 RETREG2Q8NC44 543 aa15.05■□□□□ -0
SCARB2-227ENST00000640957 CCDC197Q8NCU1 140 aa15.05■□□□□ -0
SCARB2-227ENST00000640957 TATDN2Q93075 761 aa15.05■□□□□ -0
SCARB2-227ENST00000640957 DBR1Q9UK59 544 aaKnown RBP15.05■□□□□ -0
SCARB2-227ENST00000640957 STX8Q9UNK0 236 aa15.05■□□□□ -0
SCARB2-227ENST00000640957 CCT8L1PA6NM43 557 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 UBOX5O94941 541 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 RHOBTB3O94955 611 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 ERFP50548 548 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 CAPRIN2Q6IMN6 1127 aaKnown RBP15.04■□□□□ -0
SCARB2-227ENST00000640957 CCDC87Q9NVE4 849 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 BCS1LQ9Y276 419 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 CNTNAP5Q8WYK1 1306 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 H0YGN5 161 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 EVI5O60447 810 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 PLTPP55058 493 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 TNNC1P63316 161 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 KLHL30Q0D2K2 578 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 AADACL2Q6P093 401 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 C4orf32Q8N8J7 132 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 BAP1Q92560 729 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 CHMP6Q96FZ7 201 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 AZI2Q9H6S1 392 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 SRP68Q9UHB9 627 aaKnown RBP15.04■□□□□ -0
SCARB2-227ENST00000640957 NFS1Q9Y697 457 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 MARF1Q9Y4F3 1742 aaKnown RBP15.04■□□□□ -0
SCARB2-227ENST00000640957 H0Y3Z8 333 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 FAM83BQ5T0W9 1011 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 PTF1AQ7RTS3 328 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 ANKRD42Q8N9B4 389 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 WHAMMQ8TF30 809 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 INPP4AQ96PE3 977 aaPredicted RBP15.04■□□□□ -0
SCARB2-227ENST00000640957 FGFBP2Q9BYJ0 223 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 ATP6V0A4Q9HBG4 840 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 TRPC6Q9Y210 931 aa15.04■□□□□ -0
SCARB2-227ENST00000640957 RIC1Q4ADV7 1423 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 MROH5Q6ZUA9 1318 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 LMO7Q8WWI1 1683 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 IRF6O14896 467 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 BMP15O95972 392 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 SLC8A1P32418 973 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 KCNMA1Q12791 1236 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 TRIM28Q13263 835 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms