RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 UPP2O95045 317 aa9.63□□□□□ -0.87
SCARB2-226ENST00000640916 MMP1P03956 469 aa9.63□□□□□ -0.87
SCARB2-226ENST00000640916 ICAM1P05362 532 aa9.63□□□□□ -0.87
SCARB2-226ENST00000640916 CTNNB1P35222 781 aa9.63□□□□□ -0.87
SCARB2-226ENST00000640916 PTPN21Q16825 1174 aa9.63□□□□□ -0.87
SCARB2-226ENST00000640916 SUSD6Q92537 303 aa9.63□□□□□ -0.87
SCARB2-226ENST00000640916 CLP1Q92989 425 aaKnown RBP9.63□□□□□ -0.87
SCARB2-226ENST00000640916 NKD2Q969F2 451 aaPredicted RBP9.63□□□□□ -0.87
SCARB2-226ENST00000640916 STRBPQ96SI9 672 aaKnown RBP9.63□□□□□ -0.87
SCARB2-226ENST00000640916 PHF7Q9BWX1 381 aaPredicted RBP9.63□□□□□ -0.87
SCARB2-226ENST00000640916 RANBP17Q9H2T7 1088 aaKnown RBP9.63□□□□□ -0.87
SCARB2-226ENST00000640916 NCOR2Q9Y618 2525 aa9.63□□□□□ -0.87
SCARB2-226ENST00000640916 TTC3P53804 2025 aa9.62□□□□□ -0.87
SCARB2-226ENST00000640916 TPRP12270 2363 aaKnown RBP9.62□□□□□ -0.87
SCARB2-226ENST00000640916 SLC1A4P43007 532 aa9.62□□□□□ -0.87
SCARB2-226ENST00000640916 PSEN2P49810 448 aa9.62□□□□□ -0.87
SCARB2-226ENST00000640916 NDUFV1P49821 464 aa9.62□□□□□ -0.87
SCARB2-226ENST00000640916 LY6KQ17RY6 165 aa9.62□□□□□ -0.87
SCARB2-226ENST00000640916 RCSD1Q6JBY9 416 aa9.62□□□□□ -0.87
SCARB2-226ENST00000640916 EFHBQ8N7U6 833 aa9.62□□□□□ -0.87
SCARB2-226ENST00000640916 NEDD1Q8NHV4 660 aa9.62□□□□□ -0.87
SCARB2-226ENST00000640916 RPGRIP1Q96KN7 1286 aa9.62□□□□□ -0.87
SCARB2-226ENST00000640916 ALG1Q9BT22 464 aa9.62□□□□□ -0.87
SCARB2-226ENST00000640916 C11orf84Q9BUA3 381 aaPredicted RBP9.62□□□□□ -0.87
SCARB2-226ENST00000640916 EPB41L4AQ9HCS5 686 aaPredicted RBP9.62□□□□□ -0.87
SCARB2-226ENST00000640916 PAG1Q9NWQ8 432 aa9.62□□□□□ -0.87
SCARB2-226ENST00000640916 PLAGL2Q9UPG8 496 aa9.62□□□□□ -0.87
SCARB2-226ENST00000640916 CACNA1GO43497 2377 aa9.61□□□□□ -0.87
SCARB2-226ENST00000640916 EMSYQ7Z589 1322 aa9.61□□□□□ -0.87
SCARB2-226ENST00000640916 EP300Q09472 2414 aaPredicted RBP9.61□□□□□ -0.87
SCARB2-226ENST00000640916 PTPDC1A2A3K4 754 aa9.61□□□□□ -0.87
SCARB2-226ENST00000640916 MINDY4BA8MYZ0 360 aa9.61□□□□□ -0.87
SCARB2-226ENST00000640916 RSPH10B2B2RC85 870 aa9.61□□□□□ -0.87
SCARB2-226ENST00000640916 F2P00734 622 aa9.61□□□□□ -0.87
SCARB2-226ENST00000640916 RSPH10BP0C881 870 aa9.61□□□□□ -0.87
SCARB2-226ENST00000640916 CALML3P27482 149 aa9.61□□□□□ -0.87
SCARB2-226ENST00000640916 RBM10P98175 930 aaKnown RBP9.61□□□□□ -0.87
SCARB2-226ENST00000640916 PDE4BQ07343 736 aa9.61□□□□□ -0.87
SCARB2-226ENST00000640916 PDE4DQ08499 809 aa9.61□□□□□ -0.87
SCARB2-226ENST00000640916 TTBK2Q6IQ55 1244 aa9.61□□□□□ -0.87
SCARB2-226ENST00000640916 SERINC5Q86VE9 423 aa9.61□□□□□ -0.87
SCARB2-226ENST00000640916 FIBCD1Q8N539 461 aa9.61□□□□□ -0.87
SCARB2-226ENST00000640916 C7orf31Q8N865 590 aa9.61□□□□□ -0.87
SCARB2-226ENST00000640916 RHPN1Q8TCX5 695 aa9.61□□□□□ -0.87
SCARB2-226ENST00000640916 IL17RAQ96F46 866 aa9.61□□□□□ -0.87
SCARB2-226ENST00000640916 DDRGK1Q96HY6 314 aa9.61□□□□□ -0.87
SCARB2-226ENST00000640916 IFIH1Q9BYX4 1025 aaKnown RBP9.61□□□□□ -0.87
SCARB2-226ENST00000640916 BOLA2Q9H3K6 86 aa9.61□□□□□ -0.87
SCARB2-226ENST00000640916 BARX2Q9UMQ3 279 aaPredicted RBP9.61□□□□□ -0.87
SCARB2-226ENST00000640916 CSPG5O95196 566 aa9.6□□□□□ -0.87
SCARB2-226ENST00000640916 GH1P01241 217 aa9.6□□□□□ -0.87
SCARB2-226ENST00000640916 HOXD8P13378 290 aaPredicted RBP9.6□□□□□ -0.87
SCARB2-226ENST00000640916 ATF7P17544 494 aaPredicted RBP9.6□□□□□ -0.87
SCARB2-226ENST00000640916 CASTP20810 708 aaKnown RBP9.6□□□□□ -0.87
SCARB2-226ENST00000640916 HOXC8P31273 242 aa9.6□□□□□ -0.87
SCARB2-226ENST00000640916 THPOP40225 353 aa9.6□□□□□ -0.87
SCARB2-226ENST00000640916 RPS6P62753 249 aaKnown RBP9.6□□□□□ -0.87
SCARB2-226ENST00000640916 IKQ13123 557 aaPredicted RBP9.6□□□□□ -0.87
SCARB2-226ENST00000640916 KIAA0753Q2KHM9 967 aa9.6□□□□□ -0.87
SCARB2-226ENST00000640916 CEP85Q6P2H3 762 aa9.6□□□□□ -0.87
SCARB2-226ENST00000640916 GIMAP6Q6P9H5 292 aa9.6□□□□□ -0.87
SCARB2-226ENST00000640916 BTNL9Q6UXG8 535 aa9.6□□□□□ -0.87
SCARB2-226ENST00000640916 DGLUCYQ7Z3D6 616 aa9.6□□□□□ -0.87
SCARB2-226ENST00000640916 ZNF444Q8N0Y2 327 aaPredicted RBP9.6□□□□□ -0.87
SCARB2-226ENST00000640916 DNERQ8NFT8 737 aa9.6□□□□□ -0.87
SCARB2-226ENST00000640916 VN1R2Q8NFZ6 395 aa9.6□□□□□ -0.87
SCARB2-226ENST00000640916 SPPL3Q8TCT6 385 aa9.6□□□□□ -0.87
SCARB2-226ENST00000640916 ZNF689Q96CS4 500 aaPredicted RBP9.6□□□□□ -0.87
SCARB2-226ENST00000640916 HAUS7Q99871 368 aa9.6□□□□□ -0.87
SCARB2-226ENST00000640916 SMOC2Q9H3U7 446 aa9.6□□□□□ -0.87
SCARB2-226ENST00000640916 IL17RBQ9NRM6 502 aa9.6□□□□□ -0.87
SCARB2-226ENST00000640916 PCDHGC5Q9Y5F6 944 aa9.6□□□□□ -0.87
SCARB2-226ENST00000640916 BAHCC1Q9P281 2608 aa9.6□□□□□ -0.87
SCARB2-226ENST00000640916 IPO8O15397 1037 aaKnown RBP9.59□□□□□ -0.87
SCARB2-226ENST00000640916 NMT2O60551 498 aa9.59□□□□□ -0.87
SCARB2-226ENST00000640916 BRD1O95696 1058 aa9.59□□□□□ -0.87
SCARB2-226ENST00000640916 ITGB1P05556 798 aa9.59□□□□□ -0.87
SCARB2-226ENST00000640916 NUDT7P0C024 238 aa9.59□□□□□ -0.87
SCARB2-226ENST00000640916 ZNF286BP0CG31 522 aa9.59□□□□□ -0.87
SCARB2-226ENST00000640916 SLC16A2P36021 539 aa9.59□□□□□ -0.87
SCARB2-226ENST00000640916 NRIP1P48552 1158 aa9.59□□□□□ -0.87
SCARB2-226ENST00000640916 NOVP48745 357 aa9.59□□□□□ -0.87
SCARB2-226ENST00000640916 TFAP4Q01664 338 aa9.59□□□□□ -0.87
SCARB2-226ENST00000640916 DGKDQ16760 1214 aa9.59□□□□□ -0.87
SCARB2-226ENST00000640916 RNF207Q6ZRF8 634 aa9.59□□□□□ -0.87
SCARB2-226ENST00000640916 CHST3Q7LGC8 479 aa9.59□□□□□ -0.87
SCARB2-226ENST00000640916 ERC1Q8IUD2 1116 aa9.59□□□□□ -0.87
SCARB2-226ENST00000640916 HOMEZQ8IX15 550 aa9.59□□□□□ -0.87
SCARB2-226ENST00000640916 ATP8B4Q8TF62 1192 aa9.59□□□□□ -0.87
SCARB2-226ENST00000640916 SEPT8Q92599 483 aa9.59□□□□□ -0.87
SCARB2-226ENST00000640916 EMID1Q96A84 441 aaPredicted RBP9.59□□□□□ -0.87
SCARB2-226ENST00000640916 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.59□□□□□ -0.87
SCARB2-226ENST00000640916 ISY1Q9ULR0 285 aaKnown RBP9.59□□□□□ -0.87
SCARB2-226ENST00000640916 ADGRA3Q8IWK6 1321 aa9.58□□□□□ -0.88
SCARB2-226ENST00000640916 FANCMQ8IYD8 2048 aa9.58□□□□□ -0.88
SCARB2-226ENST00000640916 ATP5JP18859 108 aa9.58□□□□□ -0.88
SCARB2-226ENST00000640916 MCTP2Q6DN12 878 aa9.58□□□□□ -0.88
SCARB2-226ENST00000640916 SEPT14Q6ZU15 432 aa9.58□□□□□ -0.88
SCARB2-226ENST00000640916 CRIPAKQ8N1N5 446 aa9.58□□□□□ -0.88
SCARB2-226ENST00000640916 ZNF710Q8N1W2 664 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms