RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 EMC4Q5J8M3 183 aa6.12□□□□□ -1.43
AP3S1-209ENST00000640413 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.12□□□□□ -1.43
AP3S1-209ENST00000640413 MYOTQ9UBF9 498 aa6.12□□□□□ -1.43
AP3S1-209ENST00000640413 ADAM29Q9UKF5 820 aa6.12□□□□□ -1.43
AP3S1-209ENST00000640413 FOXS1O43638 330 aa6.11□□□□□ -1.43
AP3S1-209ENST00000640413 ITGAVP06756 1048 aa6.11□□□□□ -1.43
AP3S1-209ENST00000640413 FHL2Q14192 279 aa6.11□□□□□ -1.43
AP3S1-209ENST00000640413 NCAPHQ15003 741 aa6.11□□□□□ -1.43
AP3S1-209ENST00000640413 METTL16Q86W50 562 aaKnown RBP6.11□□□□□ -1.43
AP3S1-209ENST00000640413 PPIL6Q8IXY8 311 aa6.11□□□□□ -1.43
AP3S1-209ENST00000640413 DGKIO75912 1065 aa6.1□□□□□ -1.43
AP3S1-209ENST00000640413 KLHL18O94889 574 aa6.1□□□□□ -1.43
AP3S1-209ENST00000640413 LTBRP36941 435 aa6.1□□□□□ -1.43
AP3S1-209ENST00000640413 KCNJ6P48051 423 aa6.1□□□□□ -1.43
AP3S1-209ENST00000640413 FOXE3Q13461 319 aa6.1□□□□□ -1.43
AP3S1-209ENST00000640413 SV2CQ496J9 727 aa6.1□□□□□ -1.43
AP3S1-209ENST00000640413 DENND5AQ6IQ26 1287 aa6.1□□□□□ -1.43
AP3S1-209ENST00000640413 TCTN3Q6NUS6 607 aa6.1□□□□□ -1.43
AP3S1-209ENST00000640413 RALYLQ86SE5 291 aaKnown RBP6.1□□□□□ -1.43
AP3S1-209ENST00000640413 ZNF227Q86WZ6 799 aa6.1□□□□□ -1.43
AP3S1-209ENST00000640413 PROSER1Q86XN7 944 aa6.1□□□□□ -1.43
AP3S1-209ENST00000640413 LRRC37BQ96QE4 947 aa6.1□□□□□ -1.43
AP3S1-209ENST00000640413 LRP2BPQ9P2M1 347 aa6.1□□□□□ -1.43
AP3S1-209ENST00000640413 SCAMP3O14828 347 aaKnown RBP6.09□□□□□ -1.43
AP3S1-209ENST00000640413 RECKO95980 971 aa6.09□□□□□ -1.43
AP3S1-209ENST00000640413 SCG5P05408 212 aa6.09□□□□□ -1.43
AP3S1-209ENST00000640413 GJA8P48165 433 aa6.09□□□□□ -1.43
AP3S1-209ENST00000640413 TGFB2P61812 414 aa6.09□□□□□ -1.43
AP3S1-209ENST00000640413 GRIN1Q05586 938 aa6.09□□□□□ -1.43
AP3S1-209ENST00000640413 ACBD5Q5T8D3 534 aaPredicted RBP6.09□□□□□ -1.43
AP3S1-209ENST00000640413 IGFL4Q6B9Z1 124 aa6.09□□□□□ -1.43
AP3S1-209ENST00000640413 Q6ZUG5 572 aa6.09□□□□□ -1.43
AP3S1-209ENST00000640413 GPR155Q7Z3F1 870 aa6.09□□□□□ -1.43
AP3S1-209ENST00000640413 ANAPC16Q96DE5 110 aa6.09□□□□□ -1.43
AP3S1-209ENST00000640413 SMOC1Q9H4F8 434 aa6.09□□□□□ -1.43
AP3S1-209ENST00000640413 EPB41L1Q9H4G0 881 aa6.09□□□□□ -1.43
AP3S1-209ENST00000640413 ASH2LQ9UBL3 628 aa6.09□□□□□ -1.43
AP3S1-209ENST00000640413 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.09□□□□□ -1.43
AP3S1-209ENST00000640413 PRKD1Q15139 912 aaPredicted RBP6.08□□□□□ -1.44
AP3S1-209ENST00000640413 NRN1LQ496H8 165 aa6.08□□□□□ -1.44
AP3S1-209ENST00000640413 HS1BP3Q53T59 392 aa6.08□□□□□ -1.44
AP3S1-209ENST00000640413 DTX3Q8N9I9 347 aa6.08□□□□□ -1.44
AP3S1-209ENST00000640413 LMF1Q96S06 567 aa6.08□□□□□ -1.44
AP3S1-209ENST00000640413 ADOQ96SZ5 270 aa6.08□□□□□ -1.44
AP3S1-209ENST00000640413 SEC61A2Q9H9S3 476 aa6.08□□□□□ -1.44
AP3S1-209ENST00000640413 SLC27A2O14975 620 aa6.07□□□□□ -1.44
AP3S1-209ENST00000640413 CPP00450 1065 aa6.07□□□□□ -1.44
AP3S1-209ENST00000640413 TESK1Q15569 626 aa6.07□□□□□ -1.44
AP3S1-209ENST00000640413 SMAD2Q15796 467 aaKnown RBP6.07□□□□□ -1.44
AP3S1-209ENST00000640413 VASNQ6EMK4 673 aa6.07□□□□□ -1.44
AP3S1-209ENST00000640413 C6orf15Q6UXA7 325 aaPredicted RBP6.07□□□□□ -1.44
AP3S1-209ENST00000640413 RNF207Q6ZRF8 634 aa6.07□□□□□ -1.44
AP3S1-209ENST00000640413 RBM12BQ8IXT5 1001 aaKnown RBP6.07□□□□□ -1.44
AP3S1-209ENST00000640413 TMEM145Q8NBT3 493 aa6.07□□□□□ -1.44
AP3S1-209ENST00000640413 GIMAP8Q8ND71 665 aaPredicted RBP6.07□□□□□ -1.44
AP3S1-209ENST00000640413 PHOSPHO1Q8TCT1 267 aa6.07□□□□□ -1.44
AP3S1-209ENST00000640413 CLEC4DQ8WXI8 215 aa6.07□□□□□ -1.44
AP3S1-209ENST00000640413 JAM3Q9BX67 310 aa6.07□□□□□ -1.44
AP3S1-209ENST00000640413 DLL4Q9NR61 685 aa6.07□□□□□ -1.44
AP3S1-209ENST00000640413 C11orf21Q9P2W6 132 aa6.07□□□□□ -1.44
AP3S1-209ENST00000640413 ZFR2Q9UPR6 939 aaKnown RBP6.07□□□□□ -1.44
AP3S1-209ENST00000640413 SLC4A7Q9Y6M7 1214 aa6.07□□□□□ -1.44
AP3S1-209ENST00000640413 KNG1P01042 644 aa6.06□□□□□ -1.44
AP3S1-209ENST00000640413 CKMP06732 381 aa6.06□□□□□ -1.44
AP3S1-209ENST00000640413 CSF2RBP32927 897 aa6.06□□□□□ -1.44
AP3S1-209ENST00000640413 GLRBP48167 497 aa6.06□□□□□ -1.44
AP3S1-209ENST00000640413 GFRA1P56159 465 aa6.06□□□□□ -1.44
AP3S1-209ENST00000640413 MIIPQ5JXC2 388 aa6.06□□□□□ -1.44
AP3S1-209ENST00000640413 TAX1BP1Q86VP1 789 aa6.06□□□□□ -1.44
AP3S1-209ENST00000640413 PIP4K2CQ8TBX8 421 aa6.06□□□□□ -1.44
AP3S1-209ENST00000640413 ZNF503Q96F45 646 aa6.06□□□□□ -1.44
AP3S1-209ENST00000640413 CCDC140Q96MF4 163 aa6.06□□□□□ -1.44
AP3S1-209ENST00000640413 CDIP1Q9H305 208 aa6.06□□□□□ -1.44
AP3S1-209ENST00000640413 HSPBP1Q9NZL4 362 aa6.06□□□□□ -1.44
AP3S1-209ENST00000640413 PTPN22Q9Y2R2 807 aa6.06□□□□□ -1.44
AP3S1-209ENST00000640413 B2RBV5 119 aa6.05□□□□□ -1.44
AP3S1-209ENST00000640413 MAFKO60675 156 aa6.05□□□□□ -1.44
AP3S1-209ENST00000640413 FBXO21O94952 628 aa6.05□□□□□ -1.44
AP3S1-209ENST00000640413 USP39Q53GS9 565 aaKnown RBP6.05□□□□□ -1.44
AP3S1-209ENST00000640413 NT5DC4Q86YG4 428 aa6.05□□□□□ -1.44
AP3S1-209ENST00000640413 STPG3Q8N7X2 389 aa6.05□□□□□ -1.44
AP3S1-209ENST00000640413 EXTL1Q92935 676 aa6.05□□□□□ -1.44
AP3S1-209ENST00000640413 C1orf159Q96HA4 380 aa6.05□□□□□ -1.44
AP3S1-209ENST00000640413 AJUBAQ96IF1 538 aa6.05□□□□□ -1.44
AP3S1-209ENST00000640413 SEC16BQ96JE7 1060 aa6.05□□□□□ -1.44
AP3S1-209ENST00000640413 SLC6A20Q9NP91 592 aa6.05□□□□□ -1.44
AP3S1-209ENST00000640413 PPARGC1AQ9UBK2 798 aaKnown RBP6.05□□□□□ -1.44
AP3S1-209ENST00000640413 ZFP69BQ9UJL9 534 aa6.05□□□□□ -1.44
AP3S1-209ENST00000640413 KRIT1O00522 736 aa6.04□□□□□ -1.44
AP3S1-209ENST00000640413 PLSCR1O15162 318 aa6.04□□□□□ -1.44
AP3S1-209ENST00000640413 TGM1P22735 817 aa6.04□□□□□ -1.44
AP3S1-209ENST00000640413 DGCR2P98153 550 aa6.04□□□□□ -1.44
AP3S1-209ENST00000640413 SKIDA1Q1XH10 827 aa6.04□□□□□ -1.44
AP3S1-209ENST00000640413 FAM178BQ8IXR5 827 aa6.04□□□□□ -1.44
AP3S1-209ENST00000640413 CHFRQ96EP1 664 aa6.04□□□□□ -1.44
AP3S1-209ENST00000640413 CSRNP2Q9H175 543 aa6.04□□□□□ -1.44
AP3S1-209ENST00000640413 SMAD7O15105 426 aaKnown RBP6.03□□□□□ -1.44
AP3S1-209ENST00000640413 SUSD5O60279 629 aa6.03□□□□□ -1.44
AP3S1-209ENST00000640413 MSCO60682 206 aa6.03□□□□□ -1.44
AP3S1-209ENST00000640413 ZNF202O95125 648 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms