RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 CHMP4BP1P59074 171 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 SNAP25P60880 206 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 WHAMMP3Q1A5X7 153 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 GPBP1Q86WP2 473 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 TTLL6Q8N841 843 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 SYT2Q8N9I0 419 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-218ENST00000639595 MTMR14Q8NCE2 650 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 KCTD10Q9H3F6 313 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 ARHGEF10LQ9HCE6 1279 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 COL4A3BPQ9Y5P4 624 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 FHOD1Q9Y613 1164 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 MYH7BA7E2Y1 1941 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 MSH4O15457 936 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 LCA5LO95447 670 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 ZSCAN20P17040 1043 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-218ENST00000639595 STAT2P52630 851 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 MAP3K10Q02779 954 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 IKQ13123 557 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-218ENST00000639595 EZH2Q15910 746 aaKnown RBP9.54□□□□□ -0.88
NECAP1-218ENST00000639595 EDRF1Q3B7T1 1238 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 USH1GQ495M9 461 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 SPDYE2Q495Y8 402 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 HERC4Q5GLZ8 1057 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-218ENST00000639595 PPP4R3CPQ6ZMV5 832 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 KRT222Q8N1A0 295 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 EHBP1Q8NDI1 1231 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 SCFD1Q8WVM8 642 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 PURBQ96QR8 312 aaKnown RBP9.54□□□□□ -0.88
NECAP1-218ENST00000639595 POLR3CQ9BUI4 534 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-218ENST00000639595 HDAC9Q9UKV0 1011 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 VAV3Q9UKW4 847 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 DNM3Q9UQ16 869 aa9.54□□□□□ -0.88
NECAP1-218ENST00000639595 CNTNAP1P78357 1384 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 TCP10L2B9ZVM9 353 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 KRT86O43790 486 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 ECE1P42892 770 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 DLGAP5Q15398 846 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 KIAA1755Q5JYT7 1200 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 TMCO3Q6UWJ1 677 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 ACER1Q8TDN7 264 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 BAP1Q92560 729 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 PCMTD1Q96MG8 357 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-218ENST00000639595 PARD6BQ9BYG5 372 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 FGFBP2Q9BYJ0 223 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 GOPCQ9HD26 462 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 EMILIN3Q9NT22 766 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 GUCA1BQ9UMX6 200 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 TNS1Q9HBL0 1735 aaKnown RBP9.53□□□□□ -0.88
NECAP1-218ENST00000639595 IGLV3-22A0A075B6J6 115 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 POTEFA5A3E0 1075 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 TRAF5O00463 557 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 EPHB6O15197 1021 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 SSBP05455 408 aaKnown RBP eCLIP9.53□□□□□ -0.88
NECAP1-218ENST00000639595 POTEIP0CG38 1075 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 KCNA3P22001 575 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 GIT2Q14161 759 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 CCDC122Q5T0U0 273 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 PAPD7Q5XG87 772 aaKnown RBP9.53□□□□□ -0.88
NECAP1-218ENST00000639595 POTEGQ6S5H5 508 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 POTEEQ6S8J3 1075 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 TRAPPC11Q7Z392 1133 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 FAM83AQ86UY5 434 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 TRIM59Q8IWR1 403 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 SPICE1Q8N0Z3 855 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 OGFOD1Q8N543 542 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 CHURC1Q8WUH1 139 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 LACRTQ9GZZ8 138 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 DEFB129Q9H1M3 183 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 RANBP17Q9H2T7 1088 aaKnown RBP9.53□□□□□ -0.88
NECAP1-218ENST00000639595 PGAP2Q9UHJ9 254 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 ZBTB21Q9ULJ3 1066 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 MYO6Q9UM54 1294 aa9.53□□□□□ -0.88
NECAP1-218ENST00000639595 NPHP3-ACAD11A0A0J9YXS1 232 aa9.52□□□□□ -0.89
NECAP1-218ENST00000639595 RCCD1A6NED2 376 aa9.52□□□□□ -0.89
NECAP1-218ENST00000639595 IPO7O95373 1038 aaKnown RBP9.52□□□□□ -0.89
NECAP1-218ENST00000639595 PNMA6AP0CW24 399 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-218ENST00000639595 HOXA13P31271 388 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-218ENST00000639595 PSMC6P62333 389 aa9.52□□□□□ -0.89
NECAP1-218ENST00000639595 EN1Q05925 392 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-218ENST00000639595 KCNMA1Q12791 1236 aa9.52□□□□□ -0.89
NECAP1-218ENST00000639595 TEX35Q5T0J7 233 aa9.52□□□□□ -0.89
NECAP1-218ENST00000639595 EPM2AIP1Q7L775 607 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-218ENST00000639595 MSANTD4Q8NCY6 345 aa9.52□□□□□ -0.89
NECAP1-218ENST00000639595 AGBL3Q8NEM8 1001 aa9.52□□□□□ -0.89
NECAP1-218ENST00000639595 SYN2Q92777 582 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-218ENST00000639595 ZBED3Q96IU2 234 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-218ENST00000639595 CCDC42Q96M95 316 aa9.52□□□□□ -0.89
NECAP1-218ENST00000639595 HSD17B14Q9BPX1 270 aa9.52□□□□□ -0.89
NECAP1-218ENST00000639595 FAM207AQ9NSI2 230 aaPredicted RBP9.52□□□□□ -0.89
NECAP1-218ENST00000639595 ARHGAP20Q9P2F6 1191 aa9.52□□□□□ -0.89
NECAP1-218ENST00000639595 TRIM10Q9UDY6 481 aa9.52□□□□□ -0.89
NECAP1-218ENST00000639595 RAB21Q9UL25 225 aa9.52□□□□□ -0.89
NECAP1-218ENST00000639595 TRAF3IP3Q9Y228 551 aa9.52□□□□□ -0.89
NECAP1-218ENST00000639595 CCDC151A5D8V7 595 aa9.52□□□□□ -0.89
NECAP1-218ENST00000639595 POTEB2H3BUK9 544 aa9.52□□□□□ -0.89
NECAP1-218ENST00000639595 ZNF263O14978 683 aa9.52□□□□□ -0.89
NECAP1-218ENST00000639595 RAD17O75943 681 aa9.52□□□□□ -0.89
NECAP1-218ENST00000639595 VAV2P52735 878 aa9.52□□□□□ -0.89
NECAP1-218ENST00000639595 BRD3Q15059 726 aa9.52□□□□□ -0.89
NECAP1-218ENST00000639595 ASTE1Q2TB18 679 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms