RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 OR14A2Q96R54 314 aa2.64□□□□□ -1.99
SCN1A-215ENST00000637285 SPON2Q9BUD6 331 aa2.64□□□□□ -1.99
SCN1A-215ENST00000637285 AKT3Q9Y243 479 aa2.64□□□□□ -1.99
SCN1A-215ENST00000637285 ZNF652Q9Y2D9 606 aa2.64□□□□□ -1.99
SCN1A-215ENST00000637285 TIMM13Q9Y5L4 95 aaPredicted RBP2.64□□□□□ -1.99
SCN1A-215ENST00000637285 ZNF888P0CJ79 500 aaPredicted RBP2.63□□□□□ -1.99
SCN1A-215ENST00000637285 KRTAP10-9P60411 292 aa2.63□□□□□ -1.99
SCN1A-215ENST00000637285 ZC3H6P61129 1189 aaKnown RBP2.63□□□□□ -1.99
SCN1A-215ENST00000637285 SLC7A5Q01650 507 aa2.63□□□□□ -1.99
SCN1A-215ENST00000637285 SMAD2Q15796 467 aaKnown RBP2.63□□□□□ -1.99
SCN1A-215ENST00000637285 CHRNA2Q15822 529 aa2.63□□□□□ -1.99
SCN1A-215ENST00000637285 STEAP3Q658P3 488 aa2.63□□□□□ -1.99
SCN1A-215ENST00000637285 PCSK4Q6UW60 755 aa2.63□□□□□ -1.99
SCN1A-215ENST00000637285 NLRP10Q86W26 655 aa2.63□□□□□ -1.99
SCN1A-215ENST00000637285 ZNF808Q8N4W9 903 aaPredicted RBP2.63□□□□□ -1.99
SCN1A-215ENST00000637285 COPS5Q92905 334 aa2.63□□□□□ -1.99
SCN1A-215ENST00000637285 RCC1LQ96I51 464 aaKnown RBP2.63□□□□□ -1.99
SCN1A-215ENST00000637285 AJUBAQ96IF1 538 aa2.63□□□□□ -1.99
SCN1A-215ENST00000637285 SLC2A4RGQ9NR83 387 aa2.63□□□□□ -1.99
SCN1A-215ENST00000637285 PPT2Q9UMR5 302 aa2.63□□□□□ -1.99
SCN1A-215ENST00000637285 X6R8D5 127 aa2.63□□□□□ -1.99
SCN1A-215ENST00000637285 MYO1BO43795 1136 aa2.62□□□□□ -1.99
SCN1A-215ENST00000637285 CDC14BO60729 498 aa2.62□□□□□ -1.99
SCN1A-215ENST00000637285 NUDT3O95989 172 aa2.62□□□□□ -1.99
SCN1A-215ENST00000637285 KNG1P01042 644 aa2.62□□□□□ -1.99
SCN1A-215ENST00000637285 CR2P20023 1033 aa2.62□□□□□ -1.99
SCN1A-215ENST00000637285 HIBADHP31937 336 aaKnown RBP2.62□□□□□ -1.99
SCN1A-215ENST00000637285 ITGAEP38570 1179 aa2.62□□□□□ -1.99
SCN1A-215ENST00000637285 USP10Q14694 798 aaKnown RBP2.62□□□□□ -1.99
SCN1A-215ENST00000637285 NOLC1Q14978 699 aaKnown RBP eCLIP2.62□□□□□ -1.99
SCN1A-215ENST00000637285 VASNQ6EMK4 673 aa2.62□□□□□ -1.99
SCN1A-215ENST00000637285 MAMDC4Q6UXC1 1216 aa2.62□□□□□ -1.99
SCN1A-215ENST00000637285 FBXO33Q7Z6M2 555 aa2.62□□□□□ -1.99
SCN1A-215ENST00000637285 STPG3Q8N7X2 389 aa2.62□□□□□ -1.99
SCN1A-215ENST00000637285 CHAMP1Q96JM3 812 aa2.62□□□□□ -1.99
SCN1A-215ENST00000637285 PRRX2Q99811 253 aa2.62□□□□□ -1.99
SCN1A-215ENST00000637285 DPYSL5Q9BPU6 564 aa2.62□□□□□ -1.99
SCN1A-215ENST00000637285 C12orf65Q9H3J6 166 aaKnown RBP2.62□□□□□ -1.99
SCN1A-215ENST00000637285 MYOTQ9UBF9 498 aa2.62□□□□□ -1.99
SCN1A-215ENST00000637285 ZFP69BQ9UJL9 534 aa2.62□□□□□ -1.99
SCN1A-215ENST00000637285 OAZ3Q9UMX2 235 aa2.62□□□□□ -1.99
SCN1A-215ENST00000637285 GTF3C3Q9Y5Q9 886 aa2.62□□□□□ -1.99
SCN1A-215ENST00000637285 KRTAP29-1A8MX34 341 aaPredicted RBP2.61□□□□□ -1.99
SCN1A-215ENST00000637285 H0Y858 1186 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 TADA3O75528 432 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 CKMP06732 381 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 KRT4P19013 534 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 DNAJA1P31689 397 aaKnown RBP2.61□□□□□ -1.99
SCN1A-215ENST00000637285 GTF2A2P52657 109 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 GRIN1Q05586 938 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 RNF151Q2KHN1 245 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 LAIR1Q6GTX8 287 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 IQCEQ6IPM2 695 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 BHLHA9Q7RTU4 235 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 C14orf37Q86TY3 774 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 PROSER1Q86XN7 944 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 REXO1L1PQ8IX06 675 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 DTX3Q8N9I9 347 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 RBBP8NLQ8NC74 664 aaPredicted RBP2.61□□□□□ -1.99
SCN1A-215ENST00000637285 FRS2Q8WU20 508 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 DIO2Q92813 273 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 PLA2G12BQ9BX93 195 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 PHAXQ9H814 394 aaKnown RBP2.61□□□□□ -1.99
SCN1A-215ENST00000637285 TLR9Q9NR96 1032 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 APEX2Q9UBZ4 518 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 FBXL7Q9UJT9 491 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 SLC30A1Q9Y6M5 507 aa2.61□□□□□ -1.99
SCN1A-215ENST00000637285 MASP2O00187 686 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 FOXN1O15353 648 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 ERBB2P04626 1255 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 CHGBP05060 677 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 MSX2P35548 267 aaPredicted RBP2.6□□□□□ -1.99
SCN1A-215ENST00000637285 RRADP55042 308 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 COL10A1Q03692 680 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 SKIDA1Q1XH10 827 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 ZKSCAN2Q63HK3 967 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 GTF2IRD2BQ6EKJ0 949 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 POMZP3Q6PJE2 187 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 CCDC81Q6ZN84 652 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 Q6ZPA2 131 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 GTF2IRD2Q86UP8 949 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 CCDC103Q8IW40 242 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 ULK2Q8IYT8 1036 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 Q8N1Y9 231 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 NPLOC4Q8TAT6 608 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.6□□□□□ -1.99
SCN1A-215ENST00000637285 PPP1R14AQ96A00 147 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 CRBNQ96SW2 442 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 LGR4Q9BXB1 951 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 CARD11Q9BXL7 1154 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 KATNBL1Q9H079 304 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 CLDND1Q9NY35 253 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 PTGFRNQ9P2B2 879 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 ARHGAP20Q9P2F6 1191 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 EMC9Q9Y3B6 208 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 NR2E1Q9Y466 385 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 SLC12A7Q9Y666 1083 aa2.6□□□□□ -1.99
SCN1A-215ENST00000637285 TMEM191CA6NGB0 347 aa2.59□□□□□ -1.99
SCN1A-215ENST00000637285 ARNTLO00327 626 aa2.59□□□□□ -1.99
SCN1A-215ENST00000637285 NOP56O00567 594 aaKnown RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms